Os01g0902200

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Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0902200| Description = Peptidase M3A and M3B, thimet/oligopeptidase F domain containing protein| Version = NM_001051651.1 GI:115441672 GeneI...")
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Gene Name

Os01g0902200

Description

Peptidase M3A and M3B, thimet/oligopeptidase F domain containing protein

Version

NM_001051651.1 GI:115441672 GeneID:4325012

Length

7232 bp

Definition

Oryza sativa Japonica Group Os01g0902200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41045211..41052442

Sequence Coding Region

41045301..41045421,41045772..41045893,41046238..41046401,41046825..41046915,41047515..41047694
,41047943..41048020,41048166..41048246,41048598..41048690,41048909..41048989
,41049087..41049249,41049366..41049486,41049771..41049843,41050116..41050223
,41050510..41050607,41050694..41050739,41051102..41051198,41051528..41051601
,41051680..41051784,41051872..41051952,41052034..41052144

Expression

GEO Profiles:Os01g0902200

Genome Context

<gbrowseImage1> name=NC_008394:41045211..41052442 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41045211..41052442 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctctccggaggcgggagcgccgggtcatcgccgcggccggcgcggcggcgctcgtcgccgtcggcctcaacctcgccttctccgccgtcgccgcccaccgccgcaggaagcggcgagagctcccagggtttactgcgcaagtcaacctctcagctgctgacatcaagagattagctgatcgcgtcgtttctaagtcgaaggaaacatacgacgctgtggctgcggttcccctagataaagtcagcttctctaatgtcattgcacctctggcggaattagatgctcagcagttcccactggttcaagcctgtgtgcttcctagaatggtctcaccgtctgatgatgtacgaagggccagtgcagaagcagagaaacgattggattctcacttccagcagtgcaggcagcgtgaagatgtgtatcgtgtcataaaggcattcacacagaaaggtgaaagaataggccttgaagcaacaagatttgtccagtgcatggtaagagagtttgaacgcaatggtgctaaactaactcaaagcaagaaaacggagatggagaaactgaaatctcacattgatgacttaagtttgaagtatattcaaagcttaaatgattccacaaaatttcttctattgaacgaggaagacctggctgggatgccactagagttcttaaaggaactggaaaatacaaatgggaagtggaaggttctgctgaccagttatcatgttactccaattcttgagcattgcaaggttggctctaccaggaaactgattgctgttgcttatggccagaaaggtggaaaagagaatatagccatcctggaaaaattggtccagctaagacaccggcttgctagattgctggggtatcccaattatgctgattatgctattgaacctagaatgccgaggacgtcaaggaaggtcttggagtttttggaggagatgtcagaacaattaaatggcctagctaatagggagctcagcgtactcaaagatctgaagatggaggaggagggtgatgctcaatttagcgtggaagacctgttatactacatgaaaagagctgaggagctcaaggttgatcttgatattggtgaaattaaacaatttttccctgttgacctggtcatatcaggaatattgaagatgtttcaagatctgtttgcactgcgatttgaggaaatgaaggatgctgagacttggcacgatacagttcgtctcttttctgtctgggatgcaagttcaagtgatcttttgggttacttttttctggatatcttttccagggaaggaaaatatgcacatacctgcgtcgtggcacttcagaatagatgcctgtgttctaatggcacaagaaaggttccagttgcagttctattgtctcaatgcccgaaagagtttgatgggaattcagcactgctgaggttcccagaagttgtaaggatattccatgaattcagtcatgtggtccatcatatctccaacagagccaccttttctagattttcgggtcttcaactggagggggattttgctgaaattccaagtctgttacttgagaattggtgctatgagaacatttctctaaaaatgatgtctggcttccatcaggacattacgaagtctatcactagtgaggcttgccaatcactgaaaagaaggcgtgacatatttgctggcctgaaactgaaacaagagatccttttgtgccttgttgatcagataatacatacaggcgaaaatgtgaacattgatgacttaatcaaggatcttcatccaaaggtaatgctaggtatacctttgttggaagggaatagcccagcttcatgttttccacgtattgctattggctatgatgctgtgtgctacagttacatatggagtgaggtgtttgcggctgatctgtttgcatcaaaatttaaagacgacttgctaaatcagcatgcggggttgcggtttagaaataaggtattggctccaggaggctcgaaaaatccccttgatatcatatctgactaccttggacgagaaccatcattgcaagctttcattcagagccgaacgaggaacagtctgtga</cdnaseq>

Protein Sequence

<aaseq>MSLRRRERRVIAAAGAAALVAVGLNLAFSAVAAHRRRKRRELPG FTAQVNLSAADIKRLADRVVSKSKETYDAVAAVPLDKVSFSNVIAPLAELDAQQFPLV QACVLPRMVSPSDDVRRASAEAEKRLDSHFQQCRQREDVYRVIKAFTQKGERIGLEAT RFVQCMVREFERNGAKLTQSKKTEMEKLKSHIDDLSLKYIQSLNDSTKFLLLNEEDLA GMPLEFLKELENTNGKWKVLLTSYHVTPILEHCKVGSTRKLIAVAYGQKGGKENIAIL EKLVQLRHRLARLLGYPNYADYAIEPRMPRTSRKVLEFLEEMSEQLNGLANRELSVLK DLKMEEEGDAQFSVEDLLYYMKRAEELKVDLDIGEIKQFFPVDLVISGILKMFQDLFA LRFEEMKDAETWHDTVRLFSVWDASSSDLLGYFFLDIFSREGKYAHTCVVALQNRCLC SNGTRKVPVAVLLSQCPKEFDGNSALLRFPEVVRIFHEFSHVVHHISNRATFSRFSGL QLEGDFAEIPSLLLENWCYENISLKMMSGFHQDITKSITSEACQSLKRRRDIFAGLKL KQEILLCLVDQIIHTGENVNIDDLIKDLHPKVMLGIPLLEGNSPASCFPRIAIGYDAV CYSYIWSEVFAADLFASKFKDDLLNQHAGLRFRNKVLAPGGSKNPLDIISDYLGREPS LQAFIQSRTRNSL</aaseq>

Gene Sequence

<dnaseqindica>91..211#562..683#1028..1191#1615..1705#2305..2484#2733..2810#2956..3036#3388..3480#3699..3779#3877..4039#4156..4276#4561..4633#4906..5013#5300..5397#5484..5529#5892..5988#6318..6391#6470..6574#6662..6742#6824..6934#agctgctcttccgttttttttcccctctctctcctcttcgccgcccgcggcgcgccttccagaaccttccagaagcttcctcccgccccgatgtctctccggaggcgggagcgccgggtcatcgccgcggccggcgcggcggcgctcgtcgccgtcggcctcaacctcgccttctccgccgtcgccgcccaccgccgcaggaagcggcgaggtacgcgccgcccgaaacccccccggagttttggttacgatgctcccctcatgtcgctctactttttcctcaagctgtgcacgcctctcctgcttctgctcaattgtgtagcaatgtagcatccgctgttgattttttttttttttttggggggggggggggcgtgaagagtggaaaaatggcccccataatgttgcccttctgtccgcaaatccacgcgtgagatgtagaaatatgtgtttgatcgcaataaatattgcaggaatttaactcttggggcatggagttatgaagatttagtggcgtagttttcgcgtgattgaatgtttgaatgtgttggatggttgcagagctcccagggtttactgcgcaagtcaacctctcagctgctgacatcaagagattagctgatcgcgtcgtttctaagtcgaaggaaacatacgacgctgtggctgcggttcccctagataaagtatgtatccaacactctgctgcctctgcattttttatggaatataccttttcaatcaaatcttaggcattgttttggaatgtgtatatgctgcattatttcatttgcatcccaccattacgttgaaatgctttttgtggtatagcagcagaaacacgtacgctttacagtatgttgtttcttaatttcattaagttgataatgtgacatgaataaatgtgtgggttctttttaaatgcctcaacactggcaggatatattcatcctatactgtctatttgcctgcataaagccaaagagtggcacgggtttcatattttggtacatgatatgttctgttgcaggtcagcttctctaatgtcattgcacctctggcggaattagatgctcagcagttcccactggttcaagcctgtgtgcttcctagaatggtctcaccgtctgatgatgtacgaagggccagtgcagaagcagagaaacgattggattctcacttccagcagtgcaggtgcaacttgttacttatttccttttctatctacacggtgtaactgctggtagttatacatctaccagacagagttgcaatcactgttgataaataatgtgaaaccatgcacataggttggtatcttggtatcttaagaatccacgatacttgtattattatataaccaattcagtgagcattcgtaacacataacatcattccagtattcattcctttccattgttgatatggttaaatgaagtgatatggttaagaaaacacattcttaatagaatctgaattccctttccttaataaaacaagggcccctgtttcaaataaaacaataacctgaattccctgttattgacctttccgatctaataaattcctgttgagactctagtataagtaccttgttttttcgtgcaaggtgtccaggcagcgtgaagatgtgtatcgtgtcataaaggcattcacacagaaaggtgaaagaataggccttgaagcaacaagatttgtccagtgcatggtagacgattcccttctctgaatgatgctatgatcacgcagctctatagatgtcccttgtcattgtatcttttcttcatccgatgtactacctctgtttcatattataagtcgcctagacttttttcctagtcaacttctttaggtttgattaaatttatagaaaaaattagcaacatctccaacaccaaatttgtttcattaaatgtaacattgagcatattttgataatatgtttattttgtgttgaaaatgttgctatatttttctataaacttgatcaaattttaaaaagtttaactaggaaaaaagttaaaacgacttatagtatgaaatggagggagtacctttgtgcgtgctctatcttttcttgttcgttttgcatttcacctatgatttattgactttaaaagattaatatctgttcgtttttagctatagatcaaagttgaaggtagacagtggatgtatagctactttacttatgaatctgttgggaaataaaggatatgctgtttgcttaaaaggtgtcccagcatatttcttgacccaacgagtacctgcttgctgattcaatcattatgtcaatgacacatacaggtaagagagtttgaacgcaatggtgctaaactaactcaaagcaagaaaacggagatggagaaactgaaatctcacattgatgacttaagtttgaagtatattcaaagcttaaatgattccacaaaatttcttctattgaacgaggaagacctggctgggatgccactagagttcttaaaggtaagctgggaggatgcagtatacacacttccgaatgttcacacatccatgatccatccaatatcattctttaatgagtttacctttaggaactacaatgtgcgaacattggactgttaaaaaatgggagtactcagcttttattgaaagctattttcggactttacgaatgaactgaagtgtgataagagaaaaaaggatgatactatttctatctgatcctacattacaatgactgttcaactcaggaactggaaaatacaaatgggaagtggaaggttctgctgaccagttatcatgttactccaattcttgagcattgcaaggtcagctctattttgtgcttcttttcatgcacatctgcataaggcatttaatattatatgctgtggagtacttaagattagaatctttttactacaattcttttatataatcgctaactggtctaatttatttcttgttttcaaggttggctctaccaggaaactgattgctgttgcttatggccagaaaggtggaaaagagaatatagccatcctggaaaaattggtaactccaaatattcatatctgtaaactcataaggaacttatacctttcgattcatgatttcatttatttcgcacaactaagttctatgctgcagttggtcaattacccaggaaagatatgtaacattatagctcattgaaataggattttattattttacgtccaacctgtgctgtagaggtgcactagggtgcaatccacatttatgagcattatttgacttaagcgttacaatgttttaatttcttaactggtaaagcaattgcttattttagatgcataatctcagttcataatggaaaccagcagctgacaagttgtgttttccccccttttaacataataataggtccagctaagacaccggcttgctagattgctggggtatcccaattatgctgattatgctattgaacctagaatgccgaggacgtcaaggaaggtttgtactttcccattatgcagatctgctagagattttttttagctaaatctgcattcttaattttgtctcaatatactgatataattactctcagatcatcagttttccaacaagatgatgtttagccatttcatttgcatcccctttcacatgctcacctaaatttgcatatgataccaagacccactcatgctctaaaggacttgtacctacaggtcttggagtttttggaggagatgtcagaacaattaaatggcctagctaatagggagctcagcgtactcaaagatctgaaggttttggacaaagctcttattgatctctctctttctttttattgattacactctttttattaacaatttaaactcatagtcaatcttctaatttcagatggaggaggagggtgatgctcaatttagcgtggaagacctgttatactacatgaaaagagctgaggagctcaaggttgatcttgatattggtgaaattaaacaatttttccctgttgacctggtcatatcaggaatattgaagatgtttcaagatctgtttggtaagatgtacccatcagagaataaaccataaccccccattattcataaaattcgactggatatacctcttccaaaatatgactggatgtgttttactctcatcttattttggcagcactgcgatttgaggaaatgaaggatgctgagacttggcacgatacagttcgtctcttttctgtctgggatgcaagttcaagtgatcttttgggttacttttttctggatatcttttccaggtttgtttggatgcatgctggtgaagttttaataattttgctagcctcacgctactatttagaaatctagttgagcatgcatattgaaacattacttctgaaagccaattctcttaggataaaatcttatcttgataaatgcagacacagaacacatgaaagaaacattaaggataaacagcataacatggaaacacaaatcacaagggaaaaaaatgcacacttccacttgcacttgcgaccaaataaagtaattttgatgaactacttgactttattcccagggaaggaaaatatgcacatacctgcgtcgtggcacttcagaatagatgcctgtgttctaatggcacaagaaaggtaatgtagagaattcatgtatttctagtgcagttagagcatgatcaattgttcgaatcggctcaattgaaaggactggttattcaaagtagtgtaaaaagggtgtcttgctaaagcaaagctactggagacttaagacaatcaaaattttacaagctagaaaacgactctgcggttctcagtttctcacgagtcgtgatatctataatcggtgaaatgtacatgtggattctagtggagcccggtgttaatttggtggtcattgccaacaggttccagttgcagttctattgtctcaatgcccgaaagagtttgatgggaattcagcactgctgaggttcccagaagttgtaaggatattccatgaattcagtcatgtggtatgctaaattctctcactttgtttttagcaaactttttaacagaaatgttctttacaaatagggcttcacagaaatatgttttgttttaagtttataatactattacttcattaggcactgtttttgccacttgggaattatcgttataccttaattatggtaaatgaaatttagctttctttcttgagaaattcgacttttgaccaatgccagattgctgattatctcttccgctgttgaacatcaaataaaactgcgttgattggtctccaatattctgtaggtccatcatatctccaacagagccaccttttctagattttcgggtcttcaactggagggggattttgctgaaattccaagtctgttacttgagaattggtaggtattgctgtgtttcttcagtaacataccaacactttggaagctgtcatttctgatgtgtaagatgaaatttgccatttcaggtgctatgagaacatttctctaaaaatgatgtctggcttccatcaggtgatgcaagttagcatgatgtttatgtgccgaaataatatttgaaacattgtgcactgcctctacagaggagatatttagatttttatactaccaagttattttaggcaatggaacaaccaagcttatgaataagaagtggatgttttttgcatgaccggaaaaacattgtttagattaagaaagcagtatatgaactgggaatagtttcctcttttgtttatgacatgaagtgaatctgatgacacataaaaaaaattgtattggtgatacaggctttttagacttagacaagttagtgttgacctgatgaaacttgtttcaaattgcacttgaaatagtttctgttcttatcattgtaggacattacgaagtctatcactagtgaggcttgccaatcactgaaaagaaggcgtgacatatttgctggcctgaaactgaaacaagagatccttttgtgtgagtcattttgctgggaagattgtttctcaacagtactatctctgatactctgacaacatagtgagatacggatactatgagacattgacgattgatgtccccagcacttcgttttctctaattgtgcaacacaataactgataaataaactcatttgtcgttcttaagacctgtattttgaacaaaagaaaaacagtcttacttcccttgttttccgcctattcactgaataaattactgtttttatatgtgtaatcccaacctggtatatgctttttgacatgttcattagtgctagctaatacgtgttcttttgctgttaccaggccttgttgatcagataatacatacaggcgaaaatgtgaacattgatgacttaatcaaggatcttcatccaaaggtacattgtaaataactgattcattatttatattacttgcatggacaactgaaggtgtaatgctcctttttttttcaggtaatgctaggtatacctttgttggaagggaatagcccagcttcatgttttccacgtattgctattggctatgatgctgtgtgctacagttacatatggagtgaggtctgatctaagcataactccaaaggcatattacactcatcatatattttaaaccattagtaaagcacattcacttttacaatgcaggtgtttgcggctgatctgtttgcatcaaaatttaaagacgacttgctaaatcagcatgcggggttgcggtttagaaataaggtactgactagtgctcctgaggcattatgtatttccatcatcgactcatggcaattgttctaaaatgctttcattattcaggtattggctccaggaggctcgaaaaatccccttgatatcatatctgactaccttggacgagaaccatcattgcaagctttcattcagagccgaacgaggaacagtctgtgaaagatcgtgtaacccttgaaggtttaattagtgttgaattatttttttttctctgagggaatagttagtgctgagatctgattatgatctgttcgtttgttcaaccttttactgcaacgagaatgcttttgcagtgacaaggtatctaggagcagtcatttttctcacatcggagctgccctcaagtttcagccatgtagtgcaatgtccgtttattgtacaattagcaactgggaaaagggggtgaagttaacttcacttcattgacgatgctgaaacttgaaaagatcatacgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0902200, RefSeq:Os01g0902200