Os10g0523100

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Revision as of 08:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0523100| Description = Isopenicillin N synthase family protein| Version = NM_001071637.1 GI:115483017 GeneID:4349156| Length = 4124 bp| De...")
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Gene Name

Os10g0523100

Description

Isopenicillin N synthase family protein

Version

NM_001071637.1 GI:115483017 GeneID:4349156

Length

4124 bp

Definition

Oryza sativa Japonica Group Os10g0523100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20750616..20754739

Sequence Coding Region

20750682..20750777,20750901..20751096,20751574..20751654,20751720..20751771,20751906..20752027
,20752832..20752932,20753105..20753163,20753262..20753318,20753682..20753727
,20753961..20754040,20754130..20754190

Expression

GEO Profiles:Os10g0523100

Genome Context

<gbrowseImage1> name=NC_008403:20750616..20754739 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20750616..20754739 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcggcggcggcggcgggaatcgcctggacctccccgtggtggacctcgcgtcctccgacccccgagccgccgccgagtccatccgaaaggcgtgcgtggagtccggattcttctacgtggtcaaccatggggtggaggagggattgctgaagaggttgttcgcggagagctcgaagttcttcgagctgccgatggaggagaagatagcgctgcggaggaacagcaaccaccggggatacaccccgccctacgccgagaagctcgatccctcgtccaaattcgaaggagacctcaaggaaagtttctatattgggcctattggagatgaaggtttgcagaatgatgctaaccagtggccttctgaagagcgcttaccaagtcggagggagacaattaagatgtaccatgcaagtgcactgtctactggcaaaaggatactctctctaatcgctctgagtttgaatcttgacgctgaattctttgagaacattggtgccttcagctgcccatcagcatttcttcgattattgcactacccaggtgaagtagacgactctgatgatggcaattatggtgcatcagctcactctgattatggaatgataaccctcctagcaacagacggcactcctgggctacagatatgcagggaaaagaataggaatccccagctctgggaagatgttcatcacattgatggggccctgattgttaacattggcgatttgctagaaaggtggacgaattgtatttacaggtctacagtgcaccgtgttgttgcagttggtaaagagcgatattctgcggctttttttcttgacccaaaccctgatttagtggttcagtgtttggaaagctgttgcagcgagtcatgcccaccgaggttctcacctataaagagtggcgactatttgaaagagcgattgagcgctacatacaaatag</cdnaseq>

Protein Sequence

<aaseq>MAGGGGGGNRLDLPVVDLASSDPRAAAESIRKACVESGFFYVVN HGVEEGLLKRLFAESSKFFELPMEEKIALRRNSNHRGYTPPYAEKLDPSSKFEGDLKE SFYIGPIGDEGLQNDANQWPSEERLPSRRETIKMYHASALSTGKRILSLIALSLNLDA EFFENIGAFSCPSAFLRLLHYPGEVDDSDDGNYGASAHSDYGMITLLATDGTPGLQIC REKNRNPQLWEDVHHIDGALIVNIGDLLERWTNCIYRSTVHRVVAVGKERYSAAFFLD PNPDLVVQCLESCCSESCPPRFSPIKSGDYLKERLSATYK</aaseq>

Gene Sequence

<dnaseqindica>67..162#286..481#959..1039#1105..1156#1291..1412#2217..2317#2490..2548#2647..2703#3067..3112#3346..3425#3515..3575#ggcggacgcggagggcggcggcggcagcagcagcaaaccgccgctttggcagaagaggaatccgggatggccggcggcggcggcggcgggaatcgcctggacctccccgtggtggacctcgcgtcctccgacccccgagccgccgccgagtccatccgaaaggtacccaatccattccggattccatggcaattttcctggaaacaatctgttccgtgggcgcggcggcggcggggagagagagagaacagggcgtgattcgtgtggtgtggtttggttttgcaggcgtgcgtggagtccggattcttctacgtggtcaaccatggggtggaggagggattgctgaagaggttgttcgcggagagctcgaagttcttcgagctgccgatggaggagaagatagcgctgcggaggaacagcaaccaccggggatacaccccgccctacgccgagaagctcgatccctcgtccaaattcgaaggtctgcgcctcctgttttgctctgctcgccgtgttaaactgctaattgttaaacctaagcatcctctcctttttgaagactgttgataaatttaatcctgaagtgtatgggataacactggcaagttagtataatagtagcacatgacagagccggagtgacccttttgtcggcaaaaatcagaagttgacatgttagtgcctgattatggaatattctttattagcagtattaagcaaattaaaaatgttccgatgtttgtgaaagatgcttttaaaaactgaactaggaaccatggttctggtttgatctatcctgaacatctcacaatcttcaataagtacaaggtgcatggagtaataaatacaagcgctcactgcctatactttgaacaaccgctaggttttgtggattttaccttctggtgtttgtagtgatgtacttatttaagatctgtaactgtgatttatgatacaggagacctcaaggaaagtttctatattgggcctattggagatgaaggtttgcagaatgatgctaaccagtggccttctgaaggtactcccttctccttttttatcacttctttccaaaacataaataaattctatctttggctacagagcgcttaccaagtcggagggagacaattaagatgtaccatgcaagtgcactgtaagtcctcgttttgctcatctcaccgaaggaaatccattaattgtattacgtcagcattgtgtttgtataatactttggtgttatttgtttaaataatttaaatattcctgcttatttgctaccactactaggtctactggcaaaaggatactctctctaatcgctctgagtttgaatcttgacgctgaattctttgagaacattggtgccttcagctgcccatcagcatttcttcgattattgcactacccaggtcaacttatttcatgctcctgtatgtcatatgacattaaccaaagtagtattctcatgatatgcagagaaatgctaaaaacatgtgtgctggtctttaggttgcttcttgttgtgttggattgctgataattgccaatggtttctttagctctgatttattcaacaagtttatttatttcaaacatgaatgagtgcactatatgtcattctaaagaatgaagaacttgatatcatcctattgttgtggtattgtcgtgtgggtgctcagaaacattacaaatctgtccattacagtgaatagggaaattgctactttcatgatcgcaattataatctttttctaaactataacaatttcatttgttagctaaaacttgcattgaagactacttttcagtttgtaaaaatatcttaactgttaacttacagtagcagctaatggagcagatctgtgtgatctctattgctaaaatttctcaaagcaactgtcttgctgctgcccgctgtttgctggagcataatgataaatatgttattgtaatctgtaagtcaatgttaatctaagttttaaagataccttaggttgcttcattttgttgattgttttgcttacctgttattatactggaaagcgggatgtgaactgaaaatatcgtgaagcttcttcaagcttctaggaacgtttgtttttgtgagctgactgtgtttccttcttgctgtggagctagttaagcgttgtgtttttcgtccgtactgtagtatttattggttttatctaaatagaaaataattttaaatgtaggtgaagtagacgactctgatgatggcaattatggtgcatcagctcactctgattatggaatgataaccctcctagcaacagacggcactcctgggctacaggtacaacattttctttgcacaataaattcaccaacttagctaaccaatcatgtagacaaatatatggtcagaaggtttggtgaggatggggttatgttcccaccttttaccactttcaagcaaaaaatagctcttgtttagaaaagtaagaatatctgttgtgaatttgcagatatgcagggaaaagaataggaatccccagctctgggaagatgttcatcacattgatgggtaaataaaagtaaataagtttttttaatatattaatggaaaaaaatcaaataaatcattactttgttgtttaatttgctggtctcttgtaccctcagggccctgattgttaacattggcgatttgctagaaaggtggacgaattgtatttacaggtacccttttccttttatttttgatgacatattctgtggttgtgaggaagcctcatgtaccatggttgttaaaaagctcaaacaaaccagttacaattgtgagtagttgcaccaagaactttctattttttgcaattcgacatggctaaatttgttgtatgacacaatgttttcttaacaagaagttggtttaggattgtctcatgaacaggttagaccatttcagtgtgtttttgaaattctataattcttttggagttctgttttattacattatacacttccttttctattttatatctctaagaaagaaaaaccttgtatatgaattttgaatgttctccctcttttgctgacttgtaggtctacagtgcaccgtgttgttgcagttggtaaagagcgatattctgtgagtattatgactgctgaattcagaatttcataattgagagttcttttttttttcctggggaatcaaggggttttgtcacctgctgaatacatgttgtatagtcaggtggacctattcatgtgcaaactatcactgataatatagacgtaacgtttcagcgacttaaattgcgtgcttaatgttaggacctttttggtgcactctcttacacatgttcttcaatttgtcaggcggctttttttcttgacccaaaccctgatttagtggttcagtgtttggaaagctgttgcagcgagtcatgcccaccgaggttctcttcctcctttaggctttagcacaagtctagttccttttattatgcttgcttctcatactgcttgaaatttgattcattttcaggttctcacctataaagagtggcgactatttgaaagagcgattgagcgctacatacaaatagtcctatgctttttcatgtgtaaggcttaacataaggttatttaaattccgttctgatttgcagtgattttttaggtggcccgtggagctacctcgggctcagttcctttgcttggacacttgacagtttacataaaaaaatgtgaattggatctgcatatcttttccaaaaacgcgcaagagaactacacaagttcaagcagtggatttttaggtcgacactaaccgtgtggaactgtggatgcaggtaaaaggaggctaacatgtgctacacggccggccatcgttctccattgtccatttttcttctgcgtttagacatcacagtagtccagaaggttgtttgtgttgttttactgtaacgctgtaaagaaaaagtctgcagtgatgtgctatgcttgatttctctctccactgctcgacaccaacctgaactttttattgtttgtcgttcaaaaaaaaaactttttattgtcacctgcgagctgactggtgtttggactagtattcttgttgacttggtaaagaaactccagtttgatcctgggag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0523100, RefSeq:Os10g0523100