Os01g0905700

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Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0905700| Description = Zinc finger, RING-type domain containing protein| Version = NM_001051664.1 GI:115441698 GeneID:4325026| Length = 335...")
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Gene Name

Os01g0905700

Description

Zinc finger, RING-type domain containing protein

Version

NM_001051664.1 GI:115441698 GeneID:4325026

Length

3356 bp

Definition

Oryza sativa Japonica Group Os01g0905700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41184916..41188271

Sequence Coding Region

41185110..41185189,41185400..41185568,41185689..41185758,41185847..41186075,41187718..41187928

Expression

GEO Profiles:Os01g0905700

Genome Context

<gbrowseImage1> name=NC_008394:41184916..41188271 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41184916..41188271 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttcatggtggcaggcctttgtccctcaggggctctctcaaggcgcttgaagctgatatccaccatgccaacaccctggcgcatgctatacacagggcctatgggggtgcctgtgtgcagatgaggctgtcttacagctccatggctccaatcatccttaacctcatccagtggatggattgcagctgctccctttcatataccctccctagttacctaggtctccttgaggttcttgtgtacaaggtatatgttgatgaggatgcctctatatccaccaacattgaaaggagagcaagcctcaaggaattctatgctgtaatatatccattcttgcaacaactcgaggggaatttgatggagaaagactgcaacgagaaaggatggtgcaaggaggcggcctccggtggcggcggccggaagctttacgccgacgataaggacgacgagagggaagatgagtgcggcatttgcttggagacttgcaccaagatggtccttccaaattgcaaccatgccatgtgcatcaactgttatcgagactggtacacaagatctcagtcatgcccgttctgccgcgggagcctgaagagagtccgatcaagggacctctgggtgctcaccggagacgacgacgtgatcgacaccgtgacgctggagaaggagaatgtgaggcacttccacagcttcatcgacagcctgcccctcatagtccctgacaacctcttgctggtgtactacgactacctagtctga</cdnaseq>

Protein Sequence

<aaseq>MFHGGRPLSLRGSLKALEADIHHANTLAHAIHRAYGGACVQMRL SYSSMAPIILNLIQWMDCSCSLSYTLPSYLGLLEVLVYKVYVDEDASISTNIERRASL KEFYAVIYPFLQQLEGNLMEKDCNEKGWCKEAASGGGGRKLYADDKDDEREDECGICL ETCTKMVLPNCNHAMCINCYRDWYTRSQSCPFCRGSLKRVRSRDLWVLTGDDDVIDTV TLEKENVRHFHSFIDSLPLIVPDNLLLVYYDYLV</aaseq>

Gene Sequence

<dnaseqindica>195..274#485..653#774..843#932..1160#2803..3013#aaaagctcccttcccagtttcccccaaagctcctttcccagagaccccaaaccaaagcagcttgcttgcttgcttgattgtttgttgcttcttgagcccctctcctccttgcccaagtctgtgtttttgtggcagacttcagcataagggtgaagcaaagcatagggtctggttttgggttcttgacagaagtcatgtttcatggtggcaggcctttgtccctcaggggctctctcaaggcgcttgaagctgatatccaccatgccaacaccctgtaagctcctcttcccccctgttcttttcatgctttattgattcttgatgttctctcttggtgtttgattgttctagaaaagttgtagaaaagggaaagctgacctttttatttctgattttgagtatttttttaaaaaaagaatttgtggggatagttcgttcttggtgttcttgagtgatactaatagatgattctgtttgttttcagggcgcatgctatacacagggcctatgggggtgcctgtgtgcagatgaggctgtcttacagctccatggctccaatcatccttaacctcatccagtggatggattgcagctgctccctttcatataccctccctagttacctaggtctccttgaggttcttgtgtacaaggtatatcgaattcttgatccttgcaagccttgcaatatatgaattaggggcaattttggggattttaataatccatggtaatggtgctcacaatctcacctgctactgttatacctccaggtatatgttgatgaggatgcctctatatccaccaacattgaaaggagagcaagcctcaaggaattctatggtatgatcttaatccttgatcttcaagttccaattttgggctcttattgccctcttgcagtgactgactttgggaccatggaatgcagctgtaatatatccattcttgcaacaactcgaggggaatttgatggagaaagactgcaacgagaaaggatggtgcaaggaggcggcctccggtggcggcggccggaagctttacgccgacgataaggacgacgagagggaagatgagtgcggcatttgcttggagacttgcaccaagatggtccttccaaattgcaaccatgccatgtgcatcaactgttatcgagactggtaatttgctccctctcacccttgcttatccgtttgagtatttaagtagtatatatatgatacccgtgcaacgatatttatcaattataggccccatgtcacatgacaccataaaagattgcaagttgctttgaagtttgaacattgcatttccactgtgcaaatatgttactattggttcagttcttttttttttcaaacttggcgctgtttgtgagctgctcctacccattctttgtgttggtaatagtagagagatggtagttgaactgttcaacagcccatcatagtcttgatgtgcacaatcttgaatttttcaacctgcatttcgtctagttgaagcttacattcttcccaaaagttgaagcatatatgttccgttcttcactgtagttgtgggggactgcaatttttcagtttcaatttacttagacaatgccataattgcttggtacctgcagttcattctatttgtaataaactacttagacaatgccatagaaggaagacttgagaggattatttccgttatccctttaatgaatactgctctgtcagtttaatcacaaattgtggtacttcatgccatttctaaatgccccttatattgttatttaaaaagaaaacaattatcactagttctatgaataggagacaaccaggtgagcatagtcataaattaaaaggaagatcgcattagtgttgactgcggaggtcgcaaaaccaaatttgaagggataattagaaggacagtggggtacattttacatttgggattctaaatcctaaatgatgttctcttagctggcagatcttacttgtttctgaagagaggtgctacaaggaagcctcctgcgtggcatagatagtatatgagtactactatataatactccctccttccctaaatgtttgacgccgttgactttttaaaatatatttgaccgttcgttttattaaaaacttttgtgaaatacgtaaaactatatgtatacataaaagtatatttaacaataaatcaaatgataggaaaagaattaataattacttaaattttttgaataagacgaacagtcaaacatttttaaaaaagtgaatggcgtcaaacattttgggatggagggagtagtatctcatgtgtctctttaatgataaatcaactggtggcttattagaaactttggtctgtcaattgcttcttctggaacattgcttcagaatagatatactagtctattgcaactatcattgcagatgcattcggtaagttggccactggctatcctgattctgttagttccagccctccaggtgcttaaaatcccagcaagcagagcactcaaactatgaaactactattactggaaaacttttttgtgatccgtcttctattggatcttgacttgcttcctgccaagctgattttgcatttggaggaatttgagtggtcgtttgcgcaactattcttcagttatcggtttcaaactttttttgcatattcagccatcctcccatttgtattcattcctattcatcagattggtttcaaactcttgtttgagcctagtcaggcatcttcccatttgtgtttattccatttcatcagattccgaccctaacaattcacatcatgggttttcaggtacacaagatctcagtcatgcccgttctgccgcgggagcctgaagagagtccgatcaagggacctctgggtgctcaccggagacgacgacgtgatcgacaccgtgacgctggagaaggagaatgtgaggcacttccacagcttcatcgacagcctgcccctcatagtccctgacaacctcttgctggtgtactacgactacctagtctgacgaagctcagctctcctcttctgaaagatattgagattcagagttcagtacgtgttccgggcagccgaccatcctctgcagattgagtctggctagcgaaatgccatgccgtcaatggcgaagacgacgacaccattgctccttattagggctgggctctgcgtaatcgcattgtttgttgtaataagtgtatatacagaattaaaaagagatattggggaagatggttttctcatgtttaactacttgtttggcacttctgctctggcaaattgccaaatgattcagaaaagggacaggtgctgggtgtttattgacctgcaccaactgtcgatttatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0905700, RefSeq:Os01g0905700