Os10g0523700

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Revision as of 08:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0523700| Description = Prephenate dehydratase domain containing protein| Version = NM_001071638.1 GI:115483019 GeneID:4349157| Length = 169...")
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Gene Name

Os10g0523700

Description

Prephenate dehydratase domain containing protein

Version

NM_001071638.1 GI:115483019 GeneID:4349157

Length

1699 bp

Definition

Oryza sativa Japonica Group Os10g0523700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20800586..20802284

Sequence Coding Region

20800940..20802166

Expression

GEO Profiles:Os10g0523700

Genome Context

<gbrowseImage1> name=NC_008403:20800586..20802284 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20800586..20802284 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctacacctcctcctccctccacctccacaagcacctcctcctccccaagaccaacccctcctcctcctactcgcggcctccgcctccgtcgttcgtcgccgcggcggccaagatcaacggcgtcaacggacactcctccaagaagtcccccaacggcaaggcgcagatcaacggcgacggcaagaagggggtcaacgggagcgggaggaagaaggcggcggcgcagcacatcaacgggaatgaccggatccatctgtcggtgagcacgggcggcgccgggggccaggatgggttcgggctcagggtggcgttccagggcgcgccgggcgcgtacagcgagttcgcggcgaagacggcgctccccgggtgcgacaccgtgccctgccgcgcgttcgccgacgcgctggcggcggtcgacggcggcgccgtcgaccgcgcgatactgcccgtcgagtccaccatggagggcaccgcgctgcggaactacgacctcctgctgaggcatgacctcgtcgtggtccaggagatcaacctgttcgtgcactactgcctcctcgccatgcccggtgtccgcgccgccgaggtgcgccgggtgattagccaccccatggcgctcgcgcactgcggccgtgcgctggcgcggctcggcgtggacagggagcccgtggaggacaccgccggcgccgtggagatgctgcggtccaaccggatgctcgacaccgccgccatcgccagcccgcgcgccgccgacctctacggcctcgacgtgctcgcgcacggcctccaggacgagtcatggaacgtcacccgcttcctgctcctctccaagccgccctcgccggtgacgctgcccatggacgccgacgccaagaccagcatggtggtcgcccaccggggcggctccatgatggtggtcctcaaggtcctctccgccttctcctcccgcaacatcaacctgaccaagctggaggtcatcaacaacaacgacggcggcggcggcggcggtggcgccgcggcgggccaccccgtgatgatcctcgacacgagcgcccgcggcgcgccgacgctccgcgcgttcccgcacgtcctctacgtcgactgcgagggcgcctctcacgacccgcgcgtcctcgacgccatcaaggagatcgagagattcgcggtgttcgtccgcgttcttggctgctacgccgccgattccaacgtctacgacctgcaatga</cdnaseq>

Protein Sequence

<aaseq>MAYTSSSLHLHKHLLLPKTNPSSSYSRPPPPSFVAAAAKINGVN GHSSKKSPNGKAQINGDGKKGVNGSGRKKAAAQHINGNDRIHLSVSTGGAGGQDGFGL RVAFQGAPGAYSEFAAKTALPGCDTVPCRAFADALAAVDGGAVDRAILPVESTMEGTA LRNYDLLLRHDLVVVQEINLFVHYCLLAMPGVRAAEVRRVISHPMALAHCGRALARLG VDREPVEDTAGAVEMLRSNRMLDTAAIASPRAADLYGLDVLAHGLQDESWNVTRFLLL SKPPSPVTLPMDADAKTSMVVAHRGGSMMVVLKVLSAFSSRNINLTKLEVINNNDGGG GGGGAAAGHPVMILDTSARGAPTLRAFPHVLYVDCEGASHDPRVLDAIKEIERFAVFV RVLGCYAADSNVYDLQ</aaseq>

Gene Sequence

<dnaseqindica>119..1345#gctcgttagctaaaactgtgaaaactctccattttccttgcctctctctctccccacccaatcccaacccaccacctctcctctcgccgccgccgccgccgccgccgcgcgccgttctatggcctacacctcctcctccctccacctccacaagcacctcctcctccccaagaccaacccctcctcctcctactcgcggcctccgcctccgtcgttcgtcgccgcggcggccaagatcaacggcgtcaacggacactcctccaagaagtcccccaacggcaaggcgcagatcaacggcgacggcaagaagggggtcaacgggagcgggaggaagaaggcggcggcgcagcacatcaacgggaatgaccggatccatctgtcggtgagcacgggcggcgccgggggccaggatgggttcgggctcagggtggcgttccagggcgcgccgggcgcgtacagcgagttcgcggcgaagacggcgctccccgggtgcgacaccgtgccctgccgcgcgttcgccgacgcgctggcggcggtcgacggcggcgccgtcgaccgcgcgatactgcccgtcgagtccaccatggagggcaccgcgctgcggaactacgacctcctgctgaggcatgacctcgtcgtggtccaggagatcaacctgttcgtgcactactgcctcctcgccatgcccggtgtccgcgccgccgaggtgcgccgggtgattagccaccccatggcgctcgcgcactgcggccgtgcgctggcgcggctcggcgtggacagggagcccgtggaggacaccgccggcgccgtggagatgctgcggtccaaccggatgctcgacaccgccgccatcgccagcccgcgcgccgccgacctctacggcctcgacgtgctcgcgcacggcctccaggacgagtcatggaacgtcacccgcttcctgctcctctccaagccgccctcgccggtgacgctgcccatggacgccgacgccaagaccagcatggtggtcgcccaccggggcggctccatgatggtggtcctcaaggtcctctccgccttctcctcccgcaacatcaacctgaccaagctggaggtcatcaacaacaacgacggcggcggcggcggcggtggcgccgcggcgggccaccccgtgatgatcctcgacacgagcgcccgcggcgcgccgacgctccgcgcgttcccgcacgtcctctacgtcgactgcgagggcgcctctcacgacccgcgcgtcctcgacgccatcaaggagatcgagagattcgcggtgttcgtccgcgttcttggctgctacgccgccgattccaacgtctacgacctgcaatgaggcggccatcgatcgaacacacagctgcggatccacatcaaatcagctagtcttgcaagatttggatcactgatcagttggattagagctctccattccagcactcacttcagtgagctacagatgctatactttgcttgcttgctgctgatgctgctgctgctgcctgctatgcgatttttgtacagatgcaataagaaatctttaccatttctgctgctggcttaggtatgtgcataggtttttaatcctggtattgatgccttctagctgaaggaaagtgtaagatggcacaggattgatgtaattttggtgtgctagatcttgattgatagtgagtattccttaatcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0523700, RefSeq:Os10g0523700