Os01g0907300

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Revision as of 05:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0907300| Description = Conserved hypothetical protein| Version = NM_001051671.1 GI:115441712 GeneID:4324979| Length = 5163 bp| Definition ...")
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Gene Name

Os01g0907300

Description

Conserved hypothetical protein

Version

NM_001051671.1 GI:115441712 GeneID:4324979

Length

5163 bp

Definition

Oryza sativa Japonica Group Os01g0907300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41242783..41247945

Sequence Coding Region

41242840..41243038,41243140..41243812,41244142..41244226,41244319..41244408,41244541..41244614
,41245009..41245093,41245170..41245256,41245385..41245515,41246230..41246311
,41246398..41246445,41246757..41246825,41246926..41247033,41247381..41247500

Expression

GEO Profiles:Os01g0907300

Genome Context

<gbrowseImage1> name=NC_008394:41242783..41247945 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41242783..41247945 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtcctggcggagatcgccggcgacgagtccccgccgccgcttcctccttccgaaggcggcgaagcttccggagccccgtccacgtcttctccctccgatgccgacggcggcggcaagccttcgccgcgcacgtcgaagcccggcaggaagcgcctcgtcctcaccgcctccgtcctcctctcgttcctcatcgggctgcccttgctgctcaagtccaccgagatccaccgctcgccgctgccgtccgacgcaatcgccgccctatcccgccgcctccactccaacccgccctcgttcccctgcggcctccatgcggtcttcctccgctccggccgcgacccctccgaggcctccgtcgcaaatcgcatcgagcgggaaatctccacccaactcgtcgatctccctgacgcttccaccgccggtaaaatctccgtgtcagtcaccgttgagtccgctggtggctgctctagtagcagcaaagtcgcctcgccttggcgatgtggtgctgtgactaccgcggacttggggcgcggcgatgaggtgtttgatgaattgcttgactcggcattgggtgatggaggcggggatgggatgagggtttacactgttgtcttcgtggacagtgacgatttgaagagaattgtcattgggaaacaccggcatgcttgggtggtcgggaaggttgatgaggctgaggttgtgtccatcattgggaaggtattcgtcaagtatttcatgaatggtggtgtcgaggagggcgaagcaagcactgtgaaaagagagttcatgccagttggatcagatggcaatatagttctttcatttagcctgctgaatgctgatccaagtgattgggtgtatgattgggagtttgaaaatattggtcaaaggatgttgactcctgttattgaggcgttacgaccgattgcgaacattaatatagagagtcaggttttgtaccacacaccaaaatcatcctattcttattctgatgataaacttggtggcaatgtccttagcgtgggagacattcctttctttgttaattcaaatgagtggcacttggatacatccatttcagctacaggacgatcaaaagttcttcaatttgtggtatatattccatcagcaagggaatgccctttgtacctgcaacttccagatggggagctttccaaaactaatgcatttatatccccaatgtggggaggtgttgttatttggaacccacctggctgttcatttggttctaagccacatggggccctggacaaaatgtcatctgaggaactcatggagactattgaaatcttcataggacagctaaggcagttatttggtctaaaatcaagttatcacacacagagtatggatggtgtaactaagttcataactagtccaaaagggtttgcccaatgggaattggatttattataccggcaccatgcatgttccaatcttttgtcctgtctcaccaccttggaatccctttccagtttggtccaatcactccccagaatgattgttatggatgaaattgggaggcaggttgagctttctcttgaagctgcaagtttagctcaaagaaacgcaagcctcggaataagtgactcttcagcagtatctgcaacaagagcgagggctttggctgaggatgcattttttcatccatctgttatgtctatcagttatgcttcaatagagcactattttgcgatttacatgccattctttgcgccagtttccttgcatgtgctgttggcggtaatgaaagagctgaaacgatacatggtagagagaaggaaatattcagcatttcttgcttcccaggcgacatcttcctga</cdnaseq>

Protein Sequence

<aaseq>MAVLAEIAGDESPPPLPPSEGGEASGAPSTSSPSDADGGGKPSP RTSKPGRKRLVLTASVLLSFLIGLPLLLKSTEIHRSPLPSDAIAALSRRLHSNPPSFP CGLHAVFLRSGRDPSEASVANRIEREISTQLVDLPDASTAGKISVSVTVESAGGCSSS SKVASPWRCGAVTTADLGRGDEVFDELLDSALGDGGGDGMRVYTVVFVDSDDLKRIVI GKHRHAWVVGKVDEAEVVSIIGKVFVKYFMNGGVEEGEASTVKREFMPVGSDGNIVLS FSLLNADPSDWVYDWEFENIGQRMLTPVIEALRPIANINIESQVLYHTPKSSYSYSDD KLGGNVLSVGDIPFFVNSNEWHLDTSISATGRSKVLQFVVYIPSARECPLYLQLPDGE LSKTNAFISPMWGGVVIWNPPGCSFGSKPHGALDKMSSEELMETIEIFIGQLRQLFGL KSSYHTQSMDGVTKFITSPKGFAQWELDLLYRHHACSNLLSCLTTLESLSSLVQSLPR MIVMDEIGRQVELSLEAASLAQRNASLGISDSSAVSATRARALAEDAFFHPSVMSISY ASIEHYFAIYMPFFAPVSLHVLLAVMKELKRYMVERRKYSAFLASQATSS</aaseq>

Gene Sequence

<dnaseqindica>58..256#358..1030#1360..1444#1537..1626#1759..1832#2227..2311#2388..2474#2603..2733#3448..3529#3616..3663#3975..4043#4144..4251#4599..4718#tccgctcctccgctgcttggtcaccgacccctcggaacgccgttcatctgagaaaggatggcggtcctggcggagatcgccggcgacgagtccccgccgccgcttcctccttccgaaggcggcgaagcttccggagccccgtccacgtcttctccctccgatgccgacggcggcggcaagccttcgccgcgcacgtcgaagcccggcaggaagcgcctcgtcctcaccgcctccgtcctcctctcgttcctcatcggtaccaatcccaacgcctccaccagctgctagattctagggttttagcgattttttttctccgtgtaacacgctcgtttatctctctgtttctcttcctagggctgcccttgctgctcaagtccaccgagatccaccgctcgccgctgccgtccgacgcaatcgccgccctatcccgccgcctccactccaacccgccctcgttcccctgcggcctccatgcggtcttcctccgctccggccgcgacccctccgaggcctccgtcgcaaatcgcatcgagcgggaaatctccacccaactcgtcgatctccctgacgcttccaccgccggtaaaatctccgtgtcagtcaccgttgagtccgctggtggctgctctagtagcagcaaagtcgcctcgccttggcgatgtggtgctgtgactaccgcggacttggggcgcggcgatgaggtgtttgatgaattgcttgactcggcattgggtgatggaggcggggatgggatgagggtttacactgttgtcttcgtggacagtgacgatttgaagagaattgtcattgggaaacaccggcatgcttgggtggtcgggaaggttgatgaggctgaggttgtgtccatcattgggaaggtattcgtcaagtatttcatgaatggtggtgtcgaggagggcgaagcaagcactgtgaaaagagagttcatgccagttggatcagatggcaatatagttctttcatttagcctgctgaatgctgatccaagtgattgggtgtatgattggtaagaacaagacatgtcttatgtttgtcttattgttgcttctctgttatatagaaatccactttatcagcatcgttaacaattgtcaaatgatatccctgtctcgttctatggtagtctgtttaaatcaaagaaaatatactggattgcatctacatttcttaggcaatgtgtaaaatgtcaaggcagtaaggctgtggaatcgcgcttattcgatgcaatcgatgaatatattgtgtatttggcatcttgcaaagatgaaaattattgtcaaattattcctgcttcttcattgttgtttcttttacatttagatgtcctgcatgcagggagtttgaaaatattggtcaaaggatgttgactcctgttattgaggcgttacgaccgattgcgaacattaatatagagagtcaggtgcaaaattgcctattttgctcaatgcttgtttcttccatcgtgtgaagctgtcaatgttgataagtactgactagtccttttgttttcaggttttgtaccacacaccaaaatcatcctattcttattctgatgataaacttggtggcaatgtccttagcgtgggagacattcctttctttgtatgtttctgaattcctctgtagaagtcatgtagccatgatggttgctgcatactacagttagctgctgttagtgtttatgacatttaactgttatagatgcactaattcaatatgcaatgaaattgataggttaattcaaatgagtggcacttggatacatccatttcagctacaggacgatcaaaagttcttcaatttgtggtgtatgttctttagaccagattggcatctttgtatttaatcttacagttcactcatcctgaacagataatggaaaaaaaagcagaataacctttcttttctatgactgcgccctgccactccattttatctgtgttctatgttcaactatatttcctgtgtcaatctcctgatggatattaaagtgattcaatgatttggtctttcttttactccttactgtgaatctaaatatcgcagactacctcatttgttaattgagatttatgatttacaaagtgtacaacagtcagaaagtattactgtgatgttctaattaccatatttcatattagttatatgatcagttgtggatgcccatatactcatttgaattgtctgtgcaataaccaccagatatattccatcagcaagggaatgccctttgtacctgcaacttccagatggggagctttccaaaactaatgcatttatatccccagtaagtgctgttttacctatcttccttttgttacccattttatcattttcttaacagtgtgtattatgttgtgcagatgtggggaggtgttgttatttggaacccacctggctgttcatttggttctaagccacatggggccctggacaaaatgtcatctgaggtgtctgtaatcaatttattgccctttttatatgatagaatgtacatattgaaatgtcacagtagttagtctgatataccttcttgcactcattatctgctgagtgctgacacatctatatggaacaggaactcatggagactattgaaatcttcataggacagctaaggcagttatttggtctaaaatcaagttatcacacacagagtatggatggtgtaactaagttcataactagtccaaaagggtttgcccaatggtgagactccctctatttccttactaaaattatctcagtaccaactcccgcttaactacgcacattagctggatgctgacacatgctacatgctctcaatttgaaaagcaaccatgaactattgattctttaatctgagattacattagttatctgcatctgacatgatgatcaataaagctatgggaattttatcacaagccacatgcatagaggatcccgtagaaatattgacaaaatacacatgtatggacaaatgtatccacataggatccaaccaacccaatttttgaggaagtctgagacaaccactagtctacaatcatcaccatctcctattgtagaaatgaaaatatgttgtgtcattggattggatcattggacaacatttttcttcatgaagatgttctcaaaattgtagtgtttatattctcaactcatcaatactgtagtctgcagtatgcaataatatgcatcaatcagggtggacttttatcaaagttagaagatcccaactacatgtcaacagctgaaattctaaatgtcccagataagattttggatgctatatgcttgatttccatatgtctcatagtaggtttttaaaacttacaagtttagtgtagttgcgactttagaagtccatctatcacatgtaacctcttaaggcgctaagccactaactgttactatcttgaccctttttttcctcagggaattggatttattataccggcaccatgcatgttccaatcttttgtcctgtctcaccaccttggaatccctttccagtttggtatgtaataaattcttgataatacataaaagactgttcttcatgctgtgcatgcactaatattattattattattatttttgtaggtccaatcactccccagaatgattgttatggatgaaattgggaggcaggtttgttcctattacattcttgccaaatggtagtagcacatagttctgcatagtagtcatttttttaaaaacaactttgcaccttctttactacaaggtctcgaagcagcatatcactcagatgataacttgggcatgtgtttcgtctgcctttttttttttaccattatgtgtactttgcaagcttgtacacagttatattctgtggatctagtgctttacaaaattaatttcgcactaagtttgtgtcatggtctaaaaaacatttaacagagcctaaatttgttatgacaagtgacatctctttgcaggttgagctttctcttgaagctgcaagtttagctcaaagaaacgcaagcctcggaataagtgactcttcagcaggcacgttaatcttttgtttgcactaaatgtaaaaaaatgataaattttatcaagaattgtgctgttctgcaattttattaagaattgtgttgttctgcagtatctgcaacaagagcgagggctttggctgaggatgcattttttcatccatctgttatgtctatcagttatgcttcaatagagcactattttgcgatttacatggtcagtatactcttctactttacacttattacagtccaatttgtgtttgacacttctgaattctttctttatcttgggcaatatagaaaactgaaaacaaaagagttaactattctccggttttaaatagtgaggattagagcttagtagcgtgcagagcaataatttcttgtccaatttgtttaatatcaacatgcaagttttacactaattgcaatcccttcaattctagaattttgctttattatttcttttgatcataaaagtaactactttagattaaaaaaaattacattgtagcacttcagagccaatactgatatgcttcgaattggcattttctgcagccattctttgcgccagtttccttgcatgtgctgttggcggtaatgaaagagctgaaacgatacatggtagagagaaggaaatattcagcatttcttgcttcccaggcgacatcttcctgatcttttggtgattatcagcagccctgtttcatgcctagtactatcatccacaccaagtctgatatagatggtagataatctgcaacggttcagccacagctgggggacgcgtcttcttaccatcaagcaactgctgggcagacaggtagaccaaatggtgtgtgcctgtgaactcgcagaccaggtgaagatgtgagggaacccagtttttgtcacaaatacggcgttcttccatgaaaccagcttggtgaggccttaactgatcgtcgggtatcattcacattttttggtgaggccttaactgatctctgaaactacagaccgctatctaaagccaatgcatctgtaaattgttgtataatttgagagcgcttgacaaactccccgcagaccaatgttggattagcagttaacacgaacttttacgggtttgatgtgtgtgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0907300, RefSeq:Os01g0907300