Os01g0908100

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Revision as of 05:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0908100| Description = RabGAP/TBC domain containing protein| Version = NM_001051675.1 GI:115441720 GeneID:4324984| Length = 2946 bp| Defin...")
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Gene Name

Os01g0908100

Description

RabGAP/TBC domain containing protein

Version

NM_001051675.1 GI:115441720 GeneID:4324984

Length

2946 bp

Definition

Oryza sativa Japonica Group Os01g0908100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41293998..41296943

Sequence Coding Region

41294165..41294314,41294397..41294513,41294763..41294942,41295091..41295219,41295292..41295390
,41295858..41296007,41296159..41296263,41296634..41296726,41296831..41296914

Expression

GEO Profiles:Os01g0908100

Genome Context

<gbrowseImage1> name=NC_008394:41293998..41296943 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41293998..41296943 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacctcaccgcgatccccgccgggggcgccccctccgccggagttcgagatctcgcggcagtcccgtctcctcgcggcgctgtccaagaaggtgatagatctcgatgagctgaggatgctggctgctcagggggtccctgacggcgccgccgtccgtcctactgtgtggaagctgttgctgggctatttgccgagtgatcgtgccctgtgggagcaggagttggcaaagaagagatcacagtacgcagcctttaaagaagaattccttagcaaccctatggaaattgcacggcaacgggaattagaaggccaagggagtgagaatgcagggagtatatataatgggttacttcatagatcagaggttacacaagaagagcacccattgagccttgggaagacaactgcatggaatcagttctttgagtattcagagattatcgagcaaattgaccgtgatgtgaagcgcactcaccctgacatgcattttttctgtggagactcatcttttgcaaagtccaatcaggaatctctgaaaaatatactgattatctttgcaaagctgaatgccggaatacgttatgtacaagggatgaatgaaattttggcacctctcttctttgtgtttcggaatgatccagatgataaaaatgctaactttgcagaagctgattctttcttctgcttcatggagttacttagtgggtttagagacaacttctgccagaaactagacaacagtgctgttggcattcaaggtactctctcaaaactgtcgcaacttgttgcgaagtatgatggagagcttcagcgttatttggaaataacaacagaaattaatcctcagttctacgcattccggtggattacgctactgttaacccaggagttcaactttgctgacactattcacatatgggacacactattaagtgatcctgatggtcctcaggagaccttgctcagaatctgctgtgcaatgctgattcttgtccgaaaacgcctattggctggtgatttcacttccaatctcaagctcctgcagaactaccccccaacaaacatcagccacctcctttacgtcgcaaacaagctgcactga</cdnaseq>

Protein Sequence

<aaseq>MATSPRSPPGAPPPPEFEISRQSRLLAALSKKVIDLDELRMLAA QGVPDGAAVRPTVWKLLLGYLPSDRALWEQELAKKRSQYAAFKEEFLSNPMEIARQRE LEGQGSENAGSIYNGLLHRSEVTQEEHPLSLGKTTAWNQFFEYSEIIEQIDRDVKRTH PDMHFFCGDSSFAKSNQESLKNILIIFAKLNAGIRYVQGMNEILAPLFFVFRNDPDDK NANFAEADSFFCFMELLSGFRDNFCQKLDNSAVGIQGTLSKLSQLVAKYDGELQRYLE ITTEINPQFYAFRWITLLLTQEFNFADTIHIWDTLLSDPDGPQETLLRICCAMLILVR KRLLAGDFTSNLKLLQNYPPTNISHLLYVANKLH</aaseq>

Gene Sequence

<dnaseqindica>2630..2779#2431..2547#2002..2181#1725..1853#1554..1652#937..1086#681..785#218..310#30..113#attctgacgtcatccaaaattccaaatccatggcgacctcaccgcgatccccgccgggggcgccccctccgccggagttcgagatctcgcggcagtcccgtctcctcgcggcggtgagatttcctgaagatatcgcgttactaggctctgtgtattcgtatttggcttactgtttttcagctttgatgggtcgttgtgggttggggaattggcgcagctgtccaagaaggtgatagatctcgatgagctgaggatgctggctgctcagggggtccctgacggcgccgccgtccgtcctactgtgtggaaggtgctctcgatttgctcgtcttttcattaatctcggatcgttccgtaggtacagccgtacaggtttggaggttaggttcatgagcgtaatgacagtagattactttctgttgcgttctagagtctagacattgttcaattattctactgtcttatgtttctgatcgttgattacacatgtccattatttagtctaatcctttacccctatcctttatgacgtaatgtccgattaaaatcggccttatggtcctattgttcatctactcagggctgctgttttttttctgttagttaatttgatgtgatcagcatgccagccttcaaaaagttatgctttatgtgtgataaaatctatgttagttttgcagctgttgctgggctatttgccgagtgatcgtgccctgtgggagcaggagttggcaaagaagagatcacagtacgcagcctttaaagaagaattccttagcaaccctgtatgccccttcagattcagatttgtgactttctctattttgattgtaattttaagatacacgtgcggtgtagtatagtacctgagatccctttttgcttgttagacctcactacaaaatagagatcctgaattctaattctgttaggtagatggaaattgcacggcaacgggaattagaaggccaagggagtgagaatgcagggagtatatataatgggttacttcatagatcagaggttacacaagaagagcacccattgagccttgggaagacaactgcatggaatcagttctttgaggtgcccactgttgcctttggatatggatctttttacatatgttgttgttgttgtttgtttgttcatctacaaattattgtcacattgtgactagttgcatcttcttagatcttatattagaactagattggtgccagtagcagatgtgcttacattcttttggaactattttggagcttttgtgatttgatcatagaaaagaccaagcataactagaatattgtaaaccacttgacatgatgctaatctctaaactattgtgctcttctttgtttcagtttgttattttggggactacataattagtcaaatacgtgctggttaaaagaataggtttgcattttagtattaggaggatcagatttttgttctagtacgcgcaccctatgtttgtatttttcaccagcttgcatcattctgatgttactactaatttatatcagctttgacatatatctttcgtgcagtattcagagattatcgagcaaattgaccgtgatgtgaagcgcactcaccctgacatgcattttttctgtggagactcatcttttgcaaagtccaatcaggtgaactccactatctaagtctaaacagagttctgctcagaaacctgactgatcataggtcatccttaccaggaatctctgaaaaatatactgattatctttgcaaagctgaatgccggaatacgttatgtacaagggatgaatgaaattttggcacctctcttctttgtgtttcggaatgatccagatgataaaaatgctgtatggagtaagcaattgttttaccatatatatgcttaatgccctgtatgatttagagcagactgtagtcagttgctgttcgttatagcaatagtttctgtgggactatctaaccatgattttattttgctatccggaatccctacagaactttgcagaagctgattctttcttctgcttcatggagttacttagtgggtttagagacaacttctgccagaaactagacaacagtgctgttggcattcaaggtactctctcaaaactgtcgcaacttgttgcgaagtatgatggagagcttcagcgttatttggaaataacaacagaagtaagtatgttctttgtactgagtactgtcaatttctgatgtgtttagtgtggtcctctgacagatttgctttatgtagtgttcaaactacattgcatctatttcgatctggcatggacctaataattcatacagtagttttgtcatcatgctaggaaacattgtagcaggaaatccacactactgccactgctatccttatttgtgcctgcagcaaaattaacacaagcatggtttctgtttctgcagattaatcctcagttctacgcattccggtggattacgctactgttaacccaggagttcaactttgctgacactattcacatatgggacacactattaagtgatcctgatggtcctcaggtagcaaacaaaacaccctggtttatcctgcaaggcttggtttttccagttcgtcgcctgaaactttatctgccgagtgcaggagaccttgctcagaatctgctgtgcaatgctgattcttgtccgaaaacgcctattggctggtgatttcacttccaatctcaagctcctgcagaactaccccccaacaaacatcagccacctcctttacgtcgcaaacaagctgcactgaactcaactgaacctcgtctggaagacctgaaacacactacccctgctacaatgtattcggtaaaaactgtgactgcattgcagaaccacgtaccattacgaatgctaatcacagccagtccattaataaaataatttggatccctacctgcttgggattccagttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0908100, RefSeq:Os01g0908100