Os01g0909300

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Revision as of 05:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0909300| Description = Conserved hypothetical protein| Version = NM_001051684.2 GI:297598156 GeneID:4324865| Length = 4374 bp| Definition ...")
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Gene Name

Os01g0909300

Description

Conserved hypothetical protein

Version

NM_001051684.2 GI:297598156 GeneID:4324865

Length

4374 bp

Definition

Oryza sativa Japonica Group Os01g0909300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41364232..41368605

Sequence Coding Region

41364232..41364611,41364889..41365322,41365416..41365594,41366224..41366304,41366416..41366502
,41366588..41366672,41366829..41366900,41367300..41367380,41367744..41367828
,41368533..41368605

Expression

GEO Profiles:Os01g0909300

Genome Context

<gbrowseImage1> name=NC_008394:41364232..41368605 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41364232..41368605 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtggagggggcgccggacctggccgacttcatgaacgactggttcttcggcaccgtcggcacacggcgcagcggcggcggtgcgtacgacttgaccggcgatcagagcagcggcaagaggccttcggcgccggcggagaagaagcagcagcagcagcaggggaggagcggcggcggcggcggtggtagcgcgagcaagcagacgcaggagtggttggaggaggcgaggaggatggtcggggccgggtcgccggggaggaagggcgtcggctcgccgtccaggcaggtgcccaggttcgccgccgccgccgccgccgggacggagccctcgccgtcgctcgaccgccgcgacccgatgtcacgctccgcccgaaggcaccggcagccgggaggcatcggcgacgagattctgcagcgcgcgtccatctcctcctcgcctccgcgcgccgacccgttcgcctccgcgccggcttcccccgcccactccctgcccccaaacccgccgtcttcccgccgcaagtcccgcttccactacccctccgcccctgacgccttctcctcctcctccgcctaccgccgcgccgcatcctccgcctccacctcgcccacctccgccgcaaagcctcaccaccgccgccacgcctccgcctcctcctcctcctcccccgccgccgtcgacgtgttcgacgatggcgtcgcgcgcctcaactccttcctccgccgccagcgcgccgccgtcgctgagctcggctccggcggccgcccatcctcgaggtccacgaagatcgtcctctccgacgcctccaaaagtgtcagctcaatcgcggcggcgatatgctacgcgtggatgctggcgagcaaggaggacgccgaggcggcggtgccggtggtgaacatgcgccgcggcaggatggagaggtgcaggcaagcggcctggctgctccaccacgtcggcgtcgacgcctctgctctgctcttcgctgacgaggttgacatggaggggctaatgatggataagcgagtcagcttggtagtggtggggcaggatgttctgaaaccaaacgataagatgggctcagtttgcacaatcctcaccaataattattgtgaagatgcttatagtctacttcagagcctggacataaagaaacttctgcttgcaggtatcctgttagatacgaaaaatctttccaacatgtgctcaaacagagattcagaggcagtgcaactgctcttgtttgtgcttcttgatcacaatgatcattcttttgtcgagtacttgaagaacaactacagagagccgtccacaaaaggtgaagggaacagtcccctggaccagaaacattcagtttcagcatcagggtcatcccaagatgctaagaagcccaattcaaataatcagagaccggtgcacgggaatggtggaaagacctcagatgaaactccccgtgggaagaacaaatatttcttagcaaaatggggtttgcaccccaatctactcttcctttacttgaggataggagaagaaactagggtcaaagtaaatgagtaa</cdnaseq>

Protein Sequence

<aaseq>MEVEGAPDLADFMNDWFFGTVGTRRSGGGAYDLTGDQSSGKRPS APAEKKQQQQQGRSGGGGGGSASKQTQEWLEEARRMVGAGSPGRKGVGSPSRQVPRFA AAAAAGTEPSPSLDRRDPMSRSARRHRQPGGIGDEILQRASISSSPPRADPFASAPAS PAHSLPPNPPSSRRKSRFHYPSAPDAFSSSSAYRRAASSASTSPTSAAKPHHRRHASA SSSSSPAAVDVFDDGVARLNSFLRRQRAAVAELGSGGRPSSRSTKIVLSDASKSVSSI AAAICYAWMLASKEDAEAAVPVVNMRRGRMERCRQAAWLLHHVGVDASALLFADEVDM EGLMMDKRVSLVVVGQDVLKPNDKMGSVCTILTNNYCEDAYSLLQSLDIKKLLLAGIL LDTKNLSNMCSNRDSEAVQLLLFVLLDHNDHSFVEYLKNNYREPSTKGEGNSPLDQKH SVSASGSSQDAKKPNSNNQRPVHGNGGKTSDETPRGKNKYFLAKWGLHPNLLFLYLRI GEETRVKVNE</aaseq>

Gene Sequence

<dnaseqindica>1..380#658..1091#1185..1363#1993..2073#2185..2271#2357..2441#2598..2669#3069..3149#3513..3597#4302..4374#atggaggtggagggggcgccggacctggccgacttcatgaacgactggttcttcggcaccgtcggcacacggcgcagcggcggcggtgcgtacgacttgaccggcgatcagagcagcggcaagaggccttcggcgccggcggagaagaagcagcagcagcagcaggggaggagcggcggcggcggcggtggtagcgcgagcaagcagacgcaggagtggttggaggaggcgaggaggatggtcggggccgggtcgccggggaggaagggcgtcggctcgccgtccaggcaggtgcccaggttcgccgccgccgccgccgccgggacggagccctcgccgtcgctcgaccgccgcgacccgatgtcacgctccgcccgaaggtacgcatgtcagtgatgtcactacgtcgtcgtccgtgcacgtgcgcgcgcacaggcgagctgtattagcggcccaatcgtcagatgggccagtggcccaacaaagctatattagcggcccagttgcaaaccacatttttttggtttgccgcccatggcggccccgcgccgccgccgccggcatcccgctgccgccgctcactgccggtggcgccgtggcgatttccttctactatgtattcgcttactagtctctcttcctccggcgagcttgcaggcaccggcagccgggaggcatcggcgacgagattctgcagcgcgcgtccatctcctcctcgcctccgcgcgccgacccgttcgcctccgcgccggcttcccccgcccactccctgcccccaaacccgccgtcttcccgccgcaagtcccgcttccactacccctccgcccctgacgccttctcctcctcctccgcctaccgccgcgccgcatcctccgcctccacctcgcccacctccgccgcaaagcctcaccaccgccgccacgcctccgcctcctcctcctcctcccccgccgccgtcgacgtgttcgacgatggcgtcgcgcgcctcaactccttcctccgccgccagcgcgccgccgtcgctgagctcggctccggcggccgcccatcctcgaggtccacgaagatcgtcctctccgacgcctccaaaagtaaggattaccaccaaatccatccccaattgctccaattgaatctaccccaccacacgctcacttgcgatttcctgttctatctccccgcaggtgtcagctcaatcgcggcggcgatatgctacgcgtggatgctggcgagcaaggaggacgccgaggcggcggtgccggtggtgaacatgcgccgcggcaggatggagaggtgcaggcaagcggcctggctgctccaccacgtcggcgtcgacgcctctgctctgctcttcgctgacgaggtactacacgatagtgatttgcgtgagctttcaggccgtttagcttagcgtgggggttggattcgtctccgacaaatcggacaactgtctaggccccggagttattgggcgtttattctgggcagaggcgacaaggatgggcaatatacagcaatcacattgcagtcgtgtcatgtgggtgttccggtttttgattggcaccatgtggctgtgatttggggttttgtggttgataggcttcttgcaattgtagcttcatgtgctgatatgggcatataaagggaaagcaattctagcaacaataagcaacataattttgaaatttgatgcatttaacatctgcgtaagatcaatttgacatgggcatctgtaatagcacctagtaaatcttattgatggcctatttccttcaaactgtttccagttttatgggcatataacatgtcaggttctccactttgaaaggaacaatcaagatgcaagcacaccattcatttccttcaaactatctcctgttttatggtcatataacacatatgtttctccaatttgaaaggaacaaccgtgatcaagcacgctgtgagtaatggtaaaatgtttatgatactgattttcataatccgacttaggttgacatggaggggctaatgatggataagcgagtcagcttggtagtggtggggcaggatgttctgaaaccaaacgataaggtaatgttatgtacttgtacagttgtactggtacttctcaagactcttgccgaggttaatgtatatgattccagcttttacttaataagcatgctcgattttgtcccctagatgggctcagtttgcacaatcctcaccaataattattgtgaagatgcttatagtctacttcagagcctggacataaagaaacttctggttagtgcatttgctatacataaaagagactgttatgcataatttagtggaatgttctgaccatgttttctgggttccccctcagcttgcaggtatcctgttagatacgaaaaatctttccaacatgtgctcaaacagagattcagaggcagtgcaactgctcttgtttggtacctctgagcatatgaggcacgaattgtttcaacaatgtaatatagtagtcttcttcattcatactatatttatttatgagtatagaatcaagaagtagcaaaaatatgtagtaatttccattcgtaacttgcttttgctgttctcttgttcagtgcttcttgatcacaatgatcattcttttgtcgagtacttgaagaacaactacagagagccgtccacaaaaggtgagcttttattcatactatatttaaatagattctgaaatccttctgtacaattttattaactggatgtatgtacatttatgttaaagacaaatttcactgtttgtcccaattcttcttaaaaatttaaacagcgttggtatgcaacagctcatgctattagggcaaaatattcttgtagtaacttcaatacccatttcacttcttacaaccttcatgactaggatgaaatatctgatagctcctcctgctgggttatattctatcactaagatagctttgattcaagtataatgctgacttactgtcatcgtcgtatatgtccctttatttttacttaacacgtgttgcctgtttcttgttattcctgacataattccattctgttgttcatattaggtgaagggaacagtcccctggaccagaaacattcagtttcagcatcagggtcatcccaagatgctaagaagcccaattcaagtaattttttctagcgcctccagtattatttgacaagtagattgtctgtaaatagttgagcaattcacagttaatgatgaggtcacactttgctggtttgaccatgacttaagaaaggaaaatacaagcgatggcttcggcgtgattatatcaaatattgaaccctggggattttacatctaatataccactaagactaagcgaaattccaaagtcaattcatagccaatgcaactttaggcagccctcccgcacacctttttttaaaaaataataatgcaaatttcttaaaagaaaaaaaacattcaactttggtatgtggtatactcttgctaatttggtggcaactgttttgcattgcagataatcagagaccggtgcacgggaatggtggaaagacctcagatgaaactccccgtgggaagaacaaatatttcttagcaaaatggtttggttttggatcaaaatagcatgttttgacttatactaattcatatcaaaatagcatgctttcacttctattaattcgactattcatttgatttacatgttgagaattcatgatttgtcacaatgttgaggaagtataattttagataacttatttattgtcctcattatatattattgtgaaaagagcactatatatgaaaactattggaactagcaattttggtcaaattaatatattttccatggttacatattttaatttttactaccagaaaatagtttttccatggtcaaactattgggaaagagcacttcctttattgtatttttgggattctgagaagagcacttccttggtatatttctggcattcctattttcaatccggatgtcaactaatgaggacatgatgattaaaaaaacatcaggaacagaactttatgaactcagttgtcttccaggattctgttttctttttcctgcatcctgtatgacatatgctaactcatttcttccagcttttttcaattacttgtaatgtttaatcattatatgattgaaatcttaactggaattgtggtggtaccaaagctacatggtccaaatgtgttaccgaaaaccatgatgaaaagtatgcactccttgactagttgcctttaacaaaagtacatctgaattatacaagtgttgtactatcaggggtttgcaccccaatctactcttcctttacttgaggataggagaagaaactagggtcaaagtaaatgagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0909300, RefSeq:Os01g0909300