Os10g0524100

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Revision as of 08:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0524100| Description = Per1-like family protein| Version = NM_001071640.1 GI:115483023 GeneID:4349159| Length = 2892 bp| Definition = Oryz...")
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Gene Name

Os10g0524100

Description

Per1-like family protein

Version

NM_001071640.1 GI:115483023 GeneID:4349159

Length

2892 bp

Definition

Oryza sativa Japonica Group Os10g0524100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20820660..20823551

Sequence Coding Region

20820936..20821222,20821647..20821834,20821922..20822121,20822254..20822515,20823107..20823213

Expression

GEO Profiles:Os10g0524100

Genome Context

<gbrowseImage1> name=NC_008403:20820660..20823551 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20820660..20823551 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggattggccgggcgcgctgggtggcgctgcttgtcggcctcgcggcagcggccgtggtggcgacgttgggtgcgtccgagggcgacgccgatccgctctacagagcctgtgttgacgaatgcgaaaagacgggttccctccgagagacctccgtgaggcactgccaagttccaactgatgaccatcctgctgataaatcatggtacgcacatgaaccattgtacttgcagtggaaagaatggaactgcaagagtgaatgcagataccactgtatgatggagagggaaagtgaaagggagcaacttggattagggtcagttaagtatcatggcaaatggcctatgaagcgtgcatctgtgtttcaggagcctatttctgctgctctttccgcgctctctctccttgtacaatttaatgggtggctatcttttttcctcctgctttcttacaagctgcctcttaggcctgaaactcaaatgacatactatgaatacactggcctatggcacatttatggtcttctggccatgaatgcatggttttggcgtgccatctatcacagttgtgatacagtttggacagaaaagttgtattattcatcatttgctgcttttattgggtactcccttatcttggcaatattgcgaactctaaatctgaaggatgaagcttccagagtgatggtggcagctccaattctggcattcacaacaactcatattttgtatctcaatttctatgaacttgataaaggcctaaacacaaaggtttgcactgctgctagccttgctcagttcctcctatgggcagtatgggctgtcatgacaaaacatccttcatgttttaagatcttgtttgtcattattggaaacgtattctcaatagtcttggaaacctatgacataccaccacgttggggatatgttgatggccgtgtattttgtgttgctatttctattcccctcacatatctctggtggaaatttgccaaggaagacgctgagatgcgcacttcaacaatcatcaagaaaacaaggtag</cdnaseq>

Protein Sequence

<aaseq>MGIGRARWVALLVGLAAAAVVATLGASEGDADPLYRACVDECEK TGSLRETSVRHCQVPTDDHPADKSWYAHEPLYLQWKEWNCKSECRYHCMMERESEREQ LGLGSVKYHGKWPMKRASVFQEPISAALSALSLLVQFNGWLSFFLLLSYKLPLRPETQ MTYYEYTGLWHIYGLLAMNAWFWRAIYHSCDTVWTEKLYYSSFAAFIGYSLILAILRT LNLKDEASRVMVAAPILAFTTTHILYLNFYELDKGLNTKVCTAASLAQFLLWAVWAVM TKHPSCFKILFVIIGNVFSIVLETYDIPPRWGYVDGRVFCVAISIPLTYLWWKFAKED AEMRTSTIIKKTR</aaseq>

Gene Sequence

<dnaseqindica>2330..2616#1718..1905#1431..1630#1037..1298#339..445#gcggcgcacaaaaacaaacccagacacacaaacaggcgcacacatccccatagcccccaaaaaccaaaaaaaagaggagcaaaaaaagaagagaagaagagaaaaaaaaaatcccacgccgcgttggctcgcgatcccctcctcccccctcccctgtcgatttgctccccggtggtggccgcccacgacgaacccccgcgccgcgcgcgattcgatcgctccttccggattctgctcccggactcggatctcctcctcctcgtcgagctcctcccgccactgcccgtgtaggtctacctgagtttggggggcggagggggggaggggagggggaggtgatggggattggccgggcgcgctgggtggcgctgcttgtcggcctcgcggcagcggccgtggtggcgacgttgggtgcgtccgagggcgacgccgatccgctctacaggtatgtagggctcgtgactccgtggattctttgtccagtgttgcgacatctcttcaaagatttggtgatttggcgaggcttgtgggggtgtgtgtgtgttttacgtttggttcgaggagctgattgcgtgtgcaatggaatcagcgagggtgtgtggcggtagtcgttcttaggcatttgctcgaacacctggtgctcgttggctgtagagcgcaagatttggtttggcctcaaagcatgattcgcccccctgaatactggtattttggtcattgatttcttatgaagagattgcaccaaggaagctaaactttttagaagtaactcccaatgtgtgtgtgctcttttgattatctaacctatatccatgatcatgcgtgagaaacaaagctttgtagggtatttcatgaccaaagctgggagatgtgacctcctgatgaagtcctgtgatttatacatacaaccttagtatttgaatccgtacataaaaaaactgtttagttctctgttctataaacatgttgggatgttgaaggttgaactgatgagcaatgacaagctaactgcctgatttgtccccaacttgtacagagcctgtgttgacgaatgcgaaaagacgggttccctccgagagacctccgtgaggcactgccaagttccaactgatgaccatcctgctgataaatcatggtacgcacatgaaccattgtacttgcagtggaaagaatggaactgcaagagtgaatgcagataccactgtatgatggagagggaaagtgaaagggagcaacttggattagggtcagttaagtatcatggcaaatggcctatgaagcgtgcatctgtgtttcaggtaatcaatcaatcatgtactaattaattgcttagcttttttataaacttgatctgtctaggcattcctttttcagttctaccttgtgtccttcacctatcactaattgcttttttttttcccttcttgcaggagcctatttctgctgctctttccgcgctctctctccttgtacaatttaatgggtggctatcttttttcctcctgctttcttacaagctgcctcttaggcctgaaactcaaatgacatactatgaatacactggcctatggcacatttatggtcttctggccatgaatgcatggttttggcgtgccatctatcacagttggtaagcccaatacattgatgaaaagtatgattccagtatatgtgtttgatcataattagttgaacttgattcttccattgcttgcagtgatacagtttggacagaaaagttgtattattcatcatttgctgcttttattgggtactcccttatcttggcaatattgcgaactctaaatctgaaggatgaagcttccagagtgatggtggcagctccaattctggcattcacaacaactcatattttgtatctcaatttctatgaacttgataaaggtaaattttagctggacatgatattgaacttttgaaaccattttacttattataggtttttcatgatgaatgcatcattcctgagtcatgacttcctgcagataattgaaatactgtcttgccaatcgatctgtatattttgtagtagtgactagtattgcttgtaaaacttaagcagtagtgaagttctgagtaggtatcatgttgctctatttaaacctgttactgtactaatgtcgaacctgcactctacatttctacactcagattatgtaataaactattgaggatctacctaactgttagaaaatatttgtgtgtcaatatttcagtaggtatgtgttaaaatgatattgcgtaaccttttagaaagtttacatctatgtatgctgatggttccttttttttttcttttcttttgcaggcctaaacacaaaggtttgcactgctgctagccttgctcagttcctcctatgggcagtatgggctgtcatgacaaaacatccttcatgttttaagatcttgtttgtcattattggaaacgtattctcaatagtcttggaaacctatgacataccaccacgttggggatatgttgatggccgtgtattttgtgttgctatttctattcccctcacatatctctggtggaaatttgccaaggaagacgctgagatgcgcacttcaacaatcatcaagaaaacaaggtagtgttcagcacaagtgaatagcacaaggatttgagcctatgtgaaatcttatgctcgagattcagtcttaccttgtaaaaatttgatcgttcatgttctttctaggcagcttgtgaattatgtttttttccatccctttttgcctcagctcagaggtttagggttaatgcttagggtgtgactagtcactttatattcattttcttgtaatcccgacagtgtaacacggtatgcttgtagctgtggtaatgtaacagaggaacgtagattcgaagct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0524100, RefSeq:Os10g0524100