Os01g0910400

From RiceWiki
Revision as of 05:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0910400| Description = Protein of unknown function DUF707 family protein| Version = NM_001051689.2 GI:297598162 GeneID:4324871| Length = 31...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0910400

Description

Protein of unknown function DUF707 family protein

Version

NM_001051689.2 GI:297598162 GeneID:4324871

Length

3188 bp

Definition

Oryza sativa Japonica Group Os01g0910400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41422502..41425689

Sequence Coding Region

41422502..41422530,41422783..41422894,41422936..41423121,41423506..41423610,41423735..41423818
,41424004..41424119,41424224..41424325,41424404..41424517,41424911..41424977
,41425045..41425098,41425487..41425561,41425645..41425689

Expression

GEO Profiles:Os01g0910400

Genome Context

<gbrowseImage1> name=NC_008394:41422502..41425689 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41422502..41425689 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaaagcttgccattctaggccgcagcagtggcttgccaagatcaaatgagggcatgaggctcctattctcagcagttattggtgttatgctaggttacttgtttgggatttcatttcctactgtcaatgtaaccaagccgcttttgttcagggaaaaaagaactgattgtatcttgcagctccacttcccttccagtattatctcatatattgaagacaaagactctggtatcacaacccaaacattgttgaatcatgcatggacatctgcaaatagtaaaaagaggaacaattctgagtctaactctgacgaaattcctaagatttatgtgccaacaaaccctaaaggtgctgaaggccttgcacctggcattgttgtgcctgaaacagacctttatcttcgaagattgtggggtgaacctagtgaggatcttactagccagccaagataccttattaccttcacagttggatactctcaaaaggcaaatattgatgcagcagtcaaaaagttttcagaaaacttcacaattatgttgttccactatgatggtcggactaatgactgggatgaatttgagtggtcaaaaagggccattcatgtgagtgtcagaaggcagactaaatggtggtatgccaagagatttttacatcctgatattgttgccccgtatgactacatatttatctgggatgaggatctaagtgtacaacatttcaatgcagaggcgtacattaagcttgttaggaagcatgggttggagatctctcagcctggtttggaacctgataaaggtctgacatggcaaatgaccaaacggctaggagatcaagaagttcacaaatttgttgaaattatggcaactgtgttctctagggatgcatggcgctgtgtatggcatatgattcagaatgacttagtccatggatggggcctcgatttcgctcttagaagatgtgttgagccagctcacgagaaaatcggagttgttgattctcagtgggttattcatcaggttattccgtcactggggaaccagggcacggctgagaatggaagaacaccatgggaaggggtaagctag</cdnaseq>

Protein Sequence

<aaseq>MSKLAILGRSSGLPRSNEGMRLLFSAVIGVMLGYLFGISFPTVN VTKPLLFREKRTDCILQLHFPSSIISYIEDKDSGITTQTLLNHAWTSANSKKRNNSES NSDEIPKIYVPTNPKGAEGLAPGIVVPETDLYLRRLWGEPSEDLTSQPRYLITFTVGY SQKANIDAAVKKFSENFTIMLFHYDGRTNDWDEFEWSKRAIHVSVRRQTKWWYAKRFL HPDIVAPYDYIFIWDEDLSVQHFNAEAYIKLVRKHGLEISQPGLEPDKGLTWQMTKRL GDQEVHKFVEIMATVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS QWVIHQVIPSLGNQGTAENGRTPWEGVS</aaseq>

Gene Sequence

<dnaseqindica>1..29#282..393#435..620#1005..1109#1234..1317#1503..1618#1723..1824#1903..2016#2410..2476#2544..2597#2986..3060#3144..3188#atgtcaaagcttgccattctaggccgcaggtatgtttttattttctactacttcctccgtttcataacgtaagtcattctagcatttcccacattcatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggtagtagtacgtagctgatgtactgtactaatgtctgatcactattagcaatatgtttatttttttctgtagtgctcataaatatgcgtcataattttattattactattattattttgtcaatcttcaacagcagtggcttgccaagatcaaatgagggcatgaggctcctattctcagcagttattggtgttatgctaggttacttgtttgggatttcatttcctactgtcaatgtaaccaaggtaaatatggatcatttgcttctcttgttttcttctaccagccgcttttgttcagggaaaaaagaactgattgtatcttgcagctccacttcccttccagtattatctcatatattgaagacaaagactctggtatcacaacccaaacattgttgaatcatgcatggacatctgcaaatagtaaaaagaggaacaattctgagtctaactctgacgaaattcctaaggtactttgccaaactgtgatttatgccatcattattttagttttgtgagtaaaggctgattctattacattctgcattattatttcctggtcaatgtcttttatattactcaacttatgtattccactatttctcatgcatggtgtgtgaagtttcaactttcaagatatgaggttgcatgaaggatgtaaatataggaatttatgcctatgttaagtttggcactgtatattaggtcctcatttacctgtgtactttgatatctcctttactggagtgtatgccatcatgtgctaaatcaacgttgttgctaatgatttctttcttcatttctattatttctgtattactgttctggttaatctacataattctttgctcaagatttatgtgccaacaaaccctaaaggtgctgaaggccttgcacctggcattgttgtgcctgaaacagacctttatcttcgaagattgtggggtgaacctagtgaggttagttaccatttcactttttcagtacttgtatcaaccaatacctttgaatggtgggtcttttaacctcttctgttttgtatgtggacgtgtggtttatgatctgaaccatatgaaccatcaggatcttactagccagccaagataccttattaccttcacagttggatactctcaaaaggcaaatattgatgcagcagtcaaaaaggtaattacttagacaactagcatgtgtaaactgattgcattgaataagcatacaattgctttgttcaaaatagtcttcagaatagaaaaaaaaaacttatgttcaactataaggcatctatcatgcttaaacagttaactgagacatctatcattcacttcaaatttacatgccttattatatagttttcagaaaacttcacaattatgttgttccactatgatggtcggactaatgactgggatgaatttgagtggtcaaaaagggccattcatgtgagtgtcagaaggcagactaaatggtaaattattgtaacagatcctgttgtgttttttcatcttctagtttagcactatgtatttgacaaccaaaggctaagtgttttactctttttttttatacaaggtggtatgccaagagatttttacatcctgatattgttgccccgtatgactacatatttatctgggatgaggatctaagtgtacaacatttcaatgcagaggcgtaagcatacaccaccttccccccttgtttgtttattttcggtctgctaaggaagagtatttcaacatgaatttttaggtacattaagcttgttaggaagcatgggttggagatctctcagcctggtttggaacctgataaaggtctgacatggcaaatgaccaaacggctaggagatcaagaagttcacaagtgagctgatgaatctacaatgcttcattgttgcttgatcatcacctacttgtattagtttcttgagtgatacttctctatgtacagagtaaccgaagagaggccaggctggtgcactgatccacatctaccaccatgtgcagcgtaatggctcagtcatttatcatgatgttttcttttctttttttttctttttttttttgaaacgatcgcggcaagaaccttgccgaatatattagaagagtgaaataaacagttttacattagacgattacaaaccagacggataagcgacatgaaggaaaaacagcaacggcataacaaaacggaaggaggatcagatgttttctttttcttaaaactatccgtcttcacattctgtttcacatgcagatttgttgaaattatggcaactgtgttctctagggatgcatggcgctgtgtatggcatatgattcaggtggagtggcatctgcactgttcttagctttgcttgaagctgtatgcttatgcccggctttttgcagaatgacttagtccatggatggggcctcgatttcgctcttagaagatgtgttgaggtatctttttttttttacattaataagactctgccctactgcattgttatatagtcctaaccagcagaaggtctaggttttcttaattttaagattctttttaaatttaattatcttggggactagtggtgtgccaatctattaagagcaaggaaaatgtgggggctaagtgattcatgtagcgaactaatacagatgacagggcagtaggtttttctcgataaacggagggcatgttaactgttttattcatgctcctagcaagctagcacaatctattatgtactggttgccaactttgttatgacagttatctggttttctccactccacatttatttatttcaaatcagtcatgttttattgagtcagaactttggtttgacagccagctcacgagaaaatcggagttgttgattctcagtgggttattcatcaggttattccgtcactggggaaccaggtatatgcactgcttatctcacttctcactccatacaattatatgatgttgtaagttgtaacattatctcctggtactggtagggcacggctgagaatggaagaacaccatgggaaggggtaagctag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0910400, RefSeq:Os01g0910400