Os01g0911100

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Revision as of 05:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0911100| Description = DEAD box RNA helicase| Version = NM_001185776.1 GI:297720686 GeneID:9271802| Length = 4161 bp| Definition = Oryza s...")
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Gene Name

Os01g0911100

Description

DEAD box RNA helicase

Version

NM_001185776.1 GI:297720686 GeneID:9271802

Length

4161 bp

Definition

Oryza sativa Japonica Group Os01g0911100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41444242..41448402

Sequence Coding Region

41444530..41444618,41444703..41444967

Expression

GEO Profiles:Os01g0911100

Genome Context

<gbrowseImage1> name=NC_008394:41444242..41448402 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41444242..41448402 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttacatactcatcattttcttgttatttttgcagatgtcaaggatattaagtgtgtgataaattttgattttccaacaactcttgaagattatattcacagaataggtcgaactggccgcgctggtgctagtggaactgcattcacctttttcacactctccaatgcaaaattctccaggaatcttgttaagatcttgagggaagctggccaggttgtgaatccagcgctagaatctatggctaaatctgccagttctatgggaggaggcaatttccggtcaagggggcgtggtgggtttggtaacagatctggctcaaatagcattcccataagaggaagaaggccatactga</cdnaseq>

Protein Sequence

<aaseq>LHTHHFLVIFADVKDIKCVINFDFPTTLEDYIHRIGRTGRAGAS GTAFTFFTLSNAKFSRNLVKILREAGQVVNPALESMAKSASSMGGGNFRSRGRGGFGN RSGSNSIPIRGRRPY</aaseq>

Gene Sequence

<dnaseqindica>3785..3873#3436..3700#gcacgccgccttcctcccagatccaaacctccctcgtcgtctccccttcccctcctcctcctcgacccccacggcggcggcgccaccggactccggcgaaccctcgcgcgcgcgcgcacgcaccgagacgtaccgtaccggcgacatgaatccctacgacctccgctacgccgacccttcctcctaccgcgacaggcgcaggtacgctaaccctaaccctaaccctagcttagctcacggctcgatgtggatctgcgttgagatgggactgaatcgattggtttggttgttccgtgcagcgaccttgccggggctcccgtgctcgccgcgtcggcccccgcggccgccaacccctacgccgccgcgtacgcgcccgcgccggctgctcccgtggcccccgctggtggcgacttctcgcgcttcggcgggagaggccgtggtggaggcgcgggcggcggtgggtggggtagaggtggtggtggtggtggtggcgctggcggataccgaggcggcggtgggagaggaggtggaagggacgcgctggactcgctctccttgccgaagcctgacttccggagccttatacccttcgagaagaacttctatgtggagtgccccgccgtgcaggccatgtcagacatggatgtgtcgcagtatcgtcgccagcgtgatatcactgttgaaggccacgacgtgcccaagccggttcgctacttccaggaggccaacttcccaggtttgctatttcaaatcggggttctgttaactgttatagcaatctgtatctctggataatacggcaacatgtcttggatgaaataatcgttctatttttttttcattttttaacagattactgtatgcaagcaatagccaagagtggattcgtagagcccacgcctattcagtcacaaggttggccaatggctttgaagggcagggacatgatcggtatcgcacaaactggctctgggaaaacactatcttaccttctccctgggttggttcatgttggtgcacagcctcgactaggtttgtttctgttacggaattgatgtacgtgctctctattttaaattgtcaattgaatgaatgcattgtaacgggtgcagaacaaggtgatggcccaattgttctgatccttgctcctacaagagaactggctgttcaaatacaacaagaatctggcaaatttggatcatactcaagaactagaagcacttgtatctatggtggagcacctaagggaccacaaatacgtgaccttaggagaggtatttgtcccatcttaccgaaaataattttggacataaggttttgtaggctaagtctcttgcgtctacttccaggggttgagattgtcattgcaacacctggtcggttgatcgatatgctggaaggtggtcacactaacctgcgaagagtaacatacctcgtcctggatgaggctgaccgcatgcttgacatgggttttgagccccagattcgtaaaatagtggcacaggcatggcttgttttagaatgcttatatcagttctggtgttttggctaactctccattttttctattgtgctaaacgtttttgttgttaatagatccggccagacaggcaaaccttgtattggagtgccacttggccaagagaagtagaatccttggctagacaatttctgcagaacccatacaaggtgcgaataacttgtgccatcgccatgccatcttttgaaaagtatttttgtgttctattattttctttcttggtactaacattttgcacatgtcgtaactcaggtaatcataggatcacctgatctgaaagctaatcattccatacagcaaattattgaggtcatatctgaacacgaaaagtatcccaggtatctactaataacactattatttacaaagttgtaccatgagctgttcctccaactaaaaatttccatgagttaagttaatgttaacttgtttcttacagactcagtaaacttttatctgatctaatggatggaagcagaatcttgatatttttccaaactaaaaaggactgtgacaaggtcactcgtcaacttagaatggatggatggccagcattatctattcatggtgacaaagctcaagcagaaagggactatgttctggcagagttcaagagtgggaaaagtcctataatggctgccacagatgtagcggcacgtggtcttggtatggtgacttgtttgaaaattagaattaggttgtagttccaagtgctcaaggatgataagtcggagggctgtcagctgtttttggttgagtgaactgaacttgtggattgatggtgtatgcaaggtgccatcatgtcagaggtagatcgtcttttctcctgtttatttccctcgagagtaagcgatggcagtgttaccagggcacttcaacctaatgttgacatttagtcttggttaggaattatttgaaaattacttggcttttggtctttcactcttaggggaacttatcttcaggtagaaatatagaatcgatgagagtctatggccattatcattagcactattttttttttcatctgttgacctctaaatttgttttgtatttttatgtttgaaaatttagagctctaggtgctttcgctttcaggcctgttaattttcctgcgctaaaattcatatggttatatgaatctattctctcctcaaggaattactttcttttgcatctttagttatttattattcatgtgttacttagttccctttttgctgtggacttgtgatctcgtagatctatgtgtggcttaacaacaatttcagctcgcatgcatgcatacatgaaaatgtctactaattattatttgtctaagtcactagtgtaaattcaactaaatttacaaatgaagtaatttagaagtgtggatctcgctgttatgctttcccttgttttccatgaatttttagaagtttatatgctgctattttaaacgtgtgccctggtcttatcactgccaactggtcccaagatgtttgtagagctattgcctactactgtattgttcttgacagtgtgaagtgtgatcctcatattgacctctgatgcagcaccttaagcattgcagcctgtgttggaattggttacagattttcattgggttcatttggatagttatggatactggtatgttattggataactttcagtattgtgagttaaggctgacagatcaatcaccatcatatccacatccaacagttattgatgcccagttcagtttttcagccccttcgacttgtattagttgtagaacttgaaagtgcatccatgggcagtttttgttcttcggctctggttcaagccatgcgctgacttctatggagatcgacaatgttgatatcccagtttggtctgctgtggtcttcagggcaaaagtattatcttgattacatactcatcattttcttgttatttttgcagatgtcaaggatattaagtgtgtgataaattttgattttccaacaactcttgaagattatattcacagaataggtcgaactggccgcgctggtgctagtggaactgcattcacctttttcacactctccaatgcaaaattctccaggaatcttgttaagatcttgagggaagctggccaggttgtgaatccagcgctagaatctatggctaaatctgccagttctatgggaggtaggtgcctctctatttcagtttttcttttggatagtattatgttatttccttattttctaatcgatttgtatctgtgtttaggaggcaatttccggtcaagggggcgtggtgggtttggtaacagatctggctcaaatagcattcccataagaggaagaaggccatactgagggcggcaaaaagattaaaacttttactgtataccgataggtattaaatgcattctttggtaaatttcctttgagattccctcgactgcttgattgacataagtcaattttcattgattggaggtggaacatgtcacacgaatggccaaatatacttatccaacagcgtaggatatgtgttccaagtttagcttcgacttggagaatggtttgtccagtgttattttgactattgaggcaacgtcctcgtgcggtactggttattgtttactattgttgggttacttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0911100, RefSeq:Os01g0911100