Os01g0915600

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Revision as of 05:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0915600| Description = Similar to TA1 protein (Fragment)| Version = NM_001051723.1 GI:115441816 GeneID:4324327| Length = 2831 bp| Definiti...")
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Gene Name

Os01g0915600

Description

Similar to TA1 protein (Fragment)

Version

NM_001051723.1 GI:115441816 GeneID:4324327

Length

2831 bp

Definition

Oryza sativa Japonica Group Os01g0915600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41650537..41653367

Sequence Coding Region

41650901..41650938,41651025..41651118,41651200..41651424,41651532..41651606,41651732..41651800
,41651907..41651972,41652080..41652301,41652382..41653038

Expression

GEO Profiles:Os01g0915600

Genome Context

<gbrowseImage1> name=NC_008394:41650537..41653367 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41650537..41653367 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaactgcgggccgcccgaccagttgccgccggcgacggcgccgtcgtgcttcctcaacctcaactgggaccagtccatggacgcggcggcgggagggcacctcgacccggcgctcagctccatggtgtcctcgccggcgtccaactcgacgggcgctctccacgggatctcgccgcagccgcactacggtggcgggacgccgctcagctcgccccccaagctcaacctgtccatgatggggcagttccaccactacgccgcgccgccgcaggtgggcggcggcggaggcggaggcgggggcctgccaatcctcgagaacctgatgcccatgggccacctcgaccagttcctcgccgaccctggcttcgccgagcgcgccgcgaggctctccggcttcgacgcccgcggcggcggcggaggaggaggctacggcggcgccggcccggcgcaattcggcctccctgacgccggcgcggccggcgcatcgaaggagatggagctcgggaacacccgggacgagtcgtcggtgtctgatccggcgcccggcggcgccgagattccgcccaagggggcttccgacggcaatgcacggaagcggaaggcctccgggaagggcaaaggcaaggacagccccatgtccacctccgccgccaaggaggattccagcggcaagcgttgcaaatcgacggaggagagcaatgcggccgccgaggagaattccggcaaggggaaggccgcgcagagcaacagcgagaatggcggcggcaagaagcaagggaaggacagctcgtcgaagccccccgagccgcccaaggactacatccatgtccgcgcccggcgcggcgaggcgacggacagccacagcctcgccgagagggtgagaagagagaagataagccagaggatgaagctgctgcaggatctcgtgccgggttgtaacaaggtggttggaaaggctgtcatgctcgatgaaatcataaactatgtgcagtcgttgcaacggcaagtcgagtttttgtccatgaagttggccactgtgaatccccagctggacttcaacaatttgcctaacctccttgctaaagatatgcaccagtcatgcagcccgttacagagctcacattttccactagagacctcaggtgcgccgctgccctacattaaccagcctcagcaagggaaccctctcggttgtggcctgacgaacggcatggacaaccagggttctatgcacccattggacccggcattttgccggccaatgggctcgcaccatcctttcctcaatggggttagcgatgcggcttctcaggttggtgctttctggcaagatgatctccaaagtgttgttcagatggatatggggcaaagtcaggagatcgccacctcttccaatagctacaatggatcgttgcaaacagtccacatgaaaatggagctttga</cdnaseq>

Protein Sequence

<aaseq>MNCGPPDQLPPATAPSCFLNLNWDQSMDAAAGGHLDPALSSMVS SPASNSTGALHGISPQPHYGGGTPLSSPPKLNLSMMGQFHHYAAPPQVGGGGGGGGGL PILENLMPMGHLDQFLADPGFAERAARLSGFDARGGGGGGGYGGAGPAQFGLPDAGAA GASKEMELGNTRDESSVSDPAPGGAEIPPKGASDGNARKRKASGKGKGKDSPMSTSAA KEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPKDYIH VRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQ RQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQSCSPLQSSHFPLETSGAPLPYINQPQ QGNPLGCGLTNGMDNQGSMHPLDPAFCRPMGSHHPFLNGVSDAASQVGAFWQDDLQSV VQMDMGQSQEIATSSNSYNGSLQTVHMKMEL</aaseq>

Gene Sequence

<dnaseqindica>2430..2467#2250..2343#1944..2168#1762..1836#1568..1636#1396..1461#1067..1288#330..986#aatctctacttgctgctgcttctgcttgcgattgcgagctctctcctctctctctgttttttttttttttggcttgcaaagcttttgctttgttttaggtgcttcttttccactcctttactgttcccccacttttccttgctttgtcacgcacacgaaaagctcctgcctttaccttatctccgctcgccttccctcacccccgtcgtagtgggatttggtggctgctcgcctctcgcgtttcttttgctggattggggcgttcttgggagctcgggaattcgggtggtttggttgggtttcgtggagaattgcggcagatctttgagatgaactgcgggccgcccgaccagttgccgccggcgacggcgccgtcgtgcttcctcaacctcaactgggaccagtccatggacgcggcggcgggagggcacctcgacccggcgctcagctccatggtgtcctcgccggcgtccaactcgacgggcgctctccacgggatctcgccgcagccgcactacggtggcgggacgccgctcagctcgccccccaagctcaacctgtccatgatggggcagttccaccactacgccgcgccgccgcaggtgggcggcggcggaggcggaggcgggggcctgccaatcctcgagaacctgatgcccatgggccacctcgaccagttcctcgccgaccctggcttcgccgagcgcgccgcgaggctctccggcttcgacgcccgcggcggcggcggaggaggaggctacggcggcgccggcccggcgcaattcggcctccctgacgccggcgcggccggcgcatcgaaggagatggagctcgggaacacccgggacgagtcgtcggtgtctgatccggcgcccggcggcgccgagattccgcccaagggggcttccgacggcaatgcacggaagcggaaggcctccgggaagggcaaaggcaaggacagccccatgtccacctccgccgccaaggtacgcgccgaattccgctcgccatggccgcgccgcaccattcttggaccgaaagatttcatctctcgagcgttctgcaggaggattccagcggcaagcgttgcaaatcgacggaggagagcaatgcggccgccgaggagaattccggcaaggggaaggccgcgcagagcaacagcgagaatggcggcggcaagaagcaagggaaggacagctcgtcgaagccccccgagccgcccaaggactacatccatgtccgcgcccggcgcggcgaggcgacggacagccacagcctcgccgagagggtacacacacaaaattcttgcagctctagcttccattgctcttctgatcatcatcttccctgtgcattaacatgctgtgtgtatctcctcttgttcgatcaattcaggtgagaagagagaagataagccagaggatgaagctgctgcaggatctcgtgccgggttgtaacaaggtaactgaagaaaagcactcatcatttgcatcatcgcccacctgtttgttacttgagttgctcggtgtgctcagattggaaactgggaaatgcttacttgtttcaggtggttggaaaggctgtcatgctcgatgaaatcataaactatgtgcagtcgttgcaacggcaagtcgaggtatttgtccagtgtcaaattcacagatgcagaatgattgtgaaactgcagcttttgccgatttagagcgcagcaagcgcgggcgtgcgccatctgaacctttgcctttcacatccattttgcagtttttgtccatgaagttggccactgtgaatccccagctggacttcaacaatttgcctaacctccttgctaaagatgtgagggcaagcttatgcgatctcattactacatttgtttcctctcttattgtgccaatcatacagttcccaacttacctcgtgtttccgattttctccctgatcagatgcaccagtcatgcagcccgttacagagctcacattttccactagagacctcaggtgcgccgctgccctacattaaccagcctcagcaagggaaccctctcggttgtggcctgacgaacggcatggacaaccagggttctatgcacccattggacccggcattttgccggccaatgggctcgcaccatcctttcctcaatggggttagcgatgcggcttctcaggtaaaaatgcacaccaatgtctcgatctcacaaaatgttcgaatgaatcgatgctgaatatgaggaatgaatgctttacaggttggtgctttctggcaagatgatctccaaagtgttgttcagatggatatggggcaaagtcaggagatcgccacctcttccaatagctacaatggtaggcaagtttcctcatcctattacctgatgccatagttaacgtcaccttaactgaattctgatgtgtaaactgctatggatcaggatcgttgcaaacagtccacatgaaaatggagctttgacatgaccaaataaaggttcgatccaaagctctgacgcccattgtacatacagagaagtcagcttgccgcggcagcactctgagattcaaccctaacaatgttgggccctagcagtgttttagcttctaatttcccatcttggtgtaatgattctttgaacaaaaatgaaacgcaccatgtacggtagtcgggtgtagtatatatatgtatgctacaagatcgtacataagtcgggtgcagtatatgatgcttcattcagacccttttaccctctcaagcagagagggacgacgtgtaatatcattatttgtattctcattatatttgtagctgatatatatctttaagatccttcttcctgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0915600, RefSeq:Os01g0915600