Os10g0524600

From RiceWiki
Revision as of 08:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0524600| Description = Proteinase inhibitor, propeptide domain containing protein| Version = NM_001071644.1 GI:115483031 GeneID:4349163| Le...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0524600

Description

Proteinase inhibitor, propeptide domain containing protein

Version

NM_001071644.1 GI:115483031 GeneID:4349163

Length

2541 bp

Definition

Oryza sativa Japonica Group Os10g0524600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20844926..20847466

Sequence Coding Region

20845170..20847449

Expression

GEO Profiles:Os10g0524600

Genome Context

<gbrowseImage1> name=NC_008403:20844926..20847466 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20844926..20847466 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtggtcgtcgatgcggtggtggtgcctcgccgtggtgctcctcctgtccacgccgctgctcgccgcgggttacctgcaggagaggaagaactacatcgtgcacctcgagccgagggacgaggccgccgccgccgctggcgacgcctccgtcgaggagtggcaccgctcgttcctgccgcaggtggccaagctcgattccgactccgacggcgccgacggaggcccgcgcattgtgtactcctacagcgacgtgttcaccgggttcgccgcgcggctcacggacgaggaggccgaggcggtgagggccacggcggggtgcctcaggctgtaccccgaggagttcctgccgctggcgacgacgcgctcgccggggttccttgggctccacctcgggaacgaggcgttctggagccactcggggtttggccgcggcgtcgtgattgggatcttggacaccgggatcctgcccagccacccgtcgttcggcgacgacggcctccagccgccgcccaagaactggaagggcacgtgtgagttcaaggcgatcgccggcggcggatgcaacaacaagatcatcggcgcccgcgcgttcgggagcgccgcggtgaactcgtcggcgccgccggtggacgacgcggggcacggcacgcacacggccagcacggccgcgggcaacttcgtggagaacgccaatgtccggggcaacgccgacggcacggcctccgggatggcgccgcacgcgcacctcgcgatatacaaggtgtgcacccgcagccgctgctccatcatggacatcatcgccgggctggacgccgccgtgaaggacggcgtcgacgtgctgtcattctccatcggcgcgtcctccggcacgcagttcaactacgaccccatcgccatcgccgggttcaaggccatggagcgtggcatcgtcgtcagctgcgccgcgggcaactccggcccggaccccggcacggtcggcaacggcgcgccgtggatgctcaccgtcgcggccggcaccatggaccgcgcgatacgcaccaccgtgaggctcggtaacggcgacgaattcgacggcgagtcactgttccagccggggaacaactccgccgcgaacccgctcccgctcgtgtaccccggcgcagacggctccgacacaagccgcgactgcagcgtgctccgcgacgccgaggtgaccggcaaggtggtgctctgcgagagcagaggcctgaacggccgcatcgaggccggccagaccgtggcggcgtacggcggcgccggcatcatcgtgatgaacagagcagccgaggggtacaccaccttcgccgacgcgcacgtgctcccggcgtcgcacgtcagcttcgacgccgggaccaaaatcgcggcgtacgtgaactccacggacaacccgacggcgagcatcgcgttcaaggggacggtgattggctcgtccccgtcgccggccgtcaccttcttctcgtcgcgtgggccaagcaaggccagcccgggcatcctgaagccggacatcaccgggcccggcatgaacatcctcgccgcgtgggcgccgagcgagtcgcacacggagttctccgacggcgtcggcctctccttcttcgtcgagtccggcacgtccatgtcgacgcctcacctgagcggcattgccgctctcctcaagagcctccacccggactggtcccccgcggcgatcaagtcggcgatcatgacgacgtcggacgccgtggaccgcaccggcgtccccatcaaggacgagcaataccgccacgccaccttctacgccatgggcgccggctacgtcaacccggcgctcgcgttcgaccccggcctagtctacgacctccacgccgacgactacatcccctacctctgcgggctggggatcggagacgacggcgtgaaggagatagcccaccggccggtcacctgctccgacgtcaagaccatcaccgaggcagagctcaactacccatccctcgtcgtcaacctgctcgcgcagccgatcacggtgaaccggacggtgaccaacgtcgggaagcccagttccgtgtacacggccgtcgtcgacatgcccaaggacgtgtccgtgatcgtgcagccgccgatgcttcggttcacggagctgaaggagatgcagagcttcaccgtgacggtgcggtgggccggccagccgaacgtcgccggcgccgagggcaacctgaagtgggtctcggacgaacacatcgtgaggagccccatcatcatcccagccacggccgcgtag</cdnaseq>

Protein Sequence

<aaseq>MEWSSMRWWCLAVVLLLSTPLLAAGYLQERKNYIVHLEPRDEAA AAAGDASVEEWHRSFLPQVAKLDSDSDGADGGPRIVYSYSDVFTGFAARLTDEEAEAV RATAGCLRLYPEEFLPLATTRSPGFLGLHLGNEAFWSHSGFGRGVVIGILDTGILPSH PSFGDDGLQPPPKNWKGTCEFKAIAGGGCNNKIIGARAFGSAAVNSSAPPVDDAGHGT HTASTAAGNFVENANVRGNADGTASGMAPHAHLAIYKVCTRSRCSIMDIIAGLDAAVK DGVDVLSFSIGASSGTQFNYDPIAIAGFKAMERGIVVSCAAGNSGPDPGTVGNGAPWM LTVAAGTMDRAIRTTVRLGNGDEFDGESLFQPGNNSAANPLPLVYPGADGSDTSRDCS VLRDAEVTGKVVLCESRGLNGRIEAGQTVAAYGGAGIIVMNRAAEGYTTFADAHVLPA SHVSFDAGTKIAAYVNSTDNPTASIAFKGTVIGSSPSPAVTFFSSRGPSKASPGILKP DITGPGMNILAAWAPSESHTEFSDGVGLSFFVESGTSMSTPHLSGIAALLKSLHPDWS PAAIKSAIMTTSDAVDRTGVPIKDEQYRHATFYAMGAGYVNPALAFDPGLVYDLHADD YIPYLCGLGIGDDGVKEIAHRPVTCSDVKTITEAELNYPSLVVNLLAQPITVNRTVTN VGKPSSVYTAVVDMPKDVSVIVQPPMLRFTELKEMQSFTVTVRWAGQPNVAGAEGNLK WVSDEHIVRSPIIIPATAA</aaseq>

Gene Sequence

<dnaseqindica>18..2297#attgtattgtacacacgatggagtggtcgtcgatgcggtggtggtgcctcgccgtggtgctcctcctgtccacgccgctgctcgccgcgggttacctgcaggagaggaagaactacatcgtgcacctcgagccgagggacgaggccgccgccgccgctggcgacgcctccgtcgaggagtggcaccgctcgttcctgccgcaggtggccaagctcgattccgactccgacggcgccgacggaggcccgcgcattgtgtactcctacagcgacgtgttcaccgggttcgccgcgcggctcacggacgaggaggccgaggcggtgagggccacggcggggtgcctcaggctgtaccccgaggagttcctgccgctggcgacgacgcgctcgccggggttccttgggctccacctcgggaacgaggcgttctggagccactcggggtttggccgcggcgtcgtgattgggatcttggacaccgggatcctgcccagccacccgtcgttcggcgacgacggcctccagccgccgcccaagaactggaagggcacgtgtgagttcaaggcgatcgccggcggcggatgcaacaacaagatcatcggcgcccgcgcgttcgggagcgccgcggtgaactcgtcggcgccgccggtggacgacgcggggcacggcacgcacacggccagcacggccgcgggcaacttcgtggagaacgccaatgtccggggcaacgccgacggcacggcctccgggatggcgccgcacgcgcacctcgcgatatacaaggtgtgcacccgcagccgctgctccatcatggacatcatcgccgggctggacgccgccgtgaaggacggcgtcgacgtgctgtcattctccatcggcgcgtcctccggcacgcagttcaactacgaccccatcgccatcgccgggttcaaggccatggagcgtggcatcgtcgtcagctgcgccgcgggcaactccggcccggaccccggcacggtcggcaacggcgcgccgtggatgctcaccgtcgcggccggcaccatggaccgcgcgatacgcaccaccgtgaggctcggtaacggcgacgaattcgacggcgagtcactgttccagccggggaacaactccgccgcgaacccgctcccgctcgtgtaccccggcgcagacggctccgacacaagccgcgactgcagcgtgctccgcgacgccgaggtgaccggcaaggtggtgctctgcgagagcagaggcctgaacggccgcatcgaggccggccagaccgtggcggcgtacggcggcgccggcatcatcgtgatgaacagagcagccgaggggtacaccaccttcgccgacgcgcacgtgctcccggcgtcgcacgtcagcttcgacgccgggaccaaaatcgcggcgtacgtgaactccacggacaacccgacggcgagcatcgcgttcaaggggacggtgattggctcgtccccgtcgccggccgtcaccttcttctcgtcgcgtgggccaagcaaggccagcccgggcatcctgaagccggacatcaccgggcccggcatgaacatcctcgccgcgtgggcgccgagcgagtcgcacacggagttctccgacggcgtcggcctctccttcttcgtcgagtccggcacgtccatgtcgacgcctcacctgagcggcattgccgctctcctcaagagcctccacccggactggtcccccgcggcgatcaagtcggcgatcatgacgacgtcggacgccgtggaccgcaccggcgtccccatcaaggacgagcaataccgccacgccaccttctacgccatgggcgccggctacgtcaacccggcgctcgcgttcgaccccggcctagtctacgacctccacgccgacgactacatcccctacctctgcgggctggggatcggagacgacggcgtgaaggagatagcccaccggccggtcacctgctccgacgtcaagaccatcaccgaggcagagctcaactacccatccctcgtcgtcaacctgctcgcgcagccgatcacggtgaaccggacggtgaccaacgtcgggaagcccagttccgtgtacacggccgtcgtcgacatgcccaaggacgtgtccgtgatcgtgcagccgccgatgcttcggttcacggagctgaaggagatgcagagcttcaccgtgacggtgcggtgggccggccagccgaacgtcgccggcgccgagggcaacctgaagtgggtctcggacgaacacatcgtgaggagccccatcatcatcccagccacggccgcgtagtaattttttgcaacttcagcatgtacagtatgtcagtaaatagctaagatcaataaagatccatcaccttggtttgacctgtgttctgttggtcaagatgtgaagaatgtagcactccttgactagttggccgatcctgtcaactttgacagctactactggagtactactaattaatttccatcttattcatcagaaactatacatcagagattatcattaatagatgagtcaatgctcattc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0524600, RefSeq:Os10g0524600