Os01g0916400

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Revision as of 05:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0916400| Description = Similar to Selenium binding protein| Version = NM_001051729.1 GI:115441828 GeneID:4324333| Length = 3406 bp| Defini...")
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Gene Name

Os01g0916400

Description

Similar to Selenium binding protein

Version

NM_001051729.1 GI:115441828 GeneID:4324333

Length

3406 bp

Definition

Oryza sativa Japonica Group Os01g0916400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41703961..41707366

Sequence Coding Region

41704070..41704196,41704890..41705085,41705189..41705416,41705745..41705976,41706064..41706171
,41706284..41706556,41706849..41707133

Expression

GEO Profiles:Os01g0916400

Genome Context

<gbrowseImage1> name=NC_008394:41703961..41707366 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41703961..41707366 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcgaacggggcggcgtgctgcggtggcgcgacggggccagggtacgcgacgccgctggaggccatggagaagggcccgagggagaagctcctctacgtcacctgcgtctacaacggtactggaattaacaagccggattacctgggtacggtggacgtggaccccaattcccctacatactcccaagtgatccacaggctcccagtcacccatgtcggcgatgagctgcatcactctggatggaacgcttgcagttcttgccatggtgatccatcggctagccgccgtttcttgattctgccttcgttgctgtctggccgtgtgtatgtcgttgacacgctgaaggacccaagggcgcctgccttgcataaggtggtcgaggctgaggacattgctgagaagacagggcttggatttcctcatacatctcattgcctggcatctggggagataatgatttcttgccttggggataaggagggaaatgctgctggcaatggcttcctcctgctggattctgaattcaatgtcaaaggacgttgggaaaagccaggtcacagccccttgtttggctatgattattggtatcaacctcgtcacaagacaatgatcagttcatcatggggagcacctgcagctttcaggactggttttgatcttcagcatgtgcaggatggtctctatggaagacatctgcacgtgtatgactggcctggtggtgagctcaagcagacactagatttaggcagtacaggtcttcttccacttgaggtgaggtttttacatgatccatcaaaggatactgggtatgtgggctgtgctctgacaagcaacatggtcagatttttcaagactgcagatggatcatggagccatgaggttgctatatctataaaaccattgaaagtgcgcaactggattctgcctgaaatgccaggactgataactgattttgttatctctctggatgatcgctatctctacttggtcaactggcttcatggtgatatcaggcagtacaacatcgaggaccctgcgaagcctgtgttggctggacaagtatgggcaggaggccttcttcaaaagggcagtgaggttgtgtatgtaactgaggatgacaaagaagagcagtacagtgtgccccaggtcaagggtcatcgacttagaggtgggccacagatgattcagctgagcctggatgggaagaggatatatgtgaccaactctcttttcagccgatgggacgagcagttctatggccaagatcttgtcaagaagggctcccacatgttgcagatcgacgtcgacactgagaaaggaggactatcgatcaaccctaacttctttgtagattttggtgctgagccagagggtccctccttggcccatgagatgagatatcctggtggagattgcacctctgatatatggatataa</cdnaseq>

Protein Sequence

<aaseq>MAAAANGAACCGGATGPGYATPLEAMEKGPREKLLYVTCVYNGT GINKPDYLGTVDVDPNSPTYSQVIHRLPVTHVGDELHHSGWNACSSCHGDPSASRRFL ILPSLLSGRVYVVDTLKDPRAPALHKVVEAEDIAEKTGLGFPHTSHCLASGEIMISCL GDKEGNAAGNGFLLLDSEFNVKGRWEKPGHSPLFGYDYWYQPRHKTMISSSWGAPAAF RTGFDLQHVQDGLYGRHLHVYDWPGGELKQTLDLGSTGLLPLEVRFLHDPSKDTGYVG CALTSNMVRFFKTADGSWSHEVAISIKPLKVRNWILPEMPGLITDFVISLDDRYLYLV NWLHGDIRQYNIEDPAKPVLAGQVWAGGLLQKGSEVVYVTEDDKEEQYSVPQVKGHRL RGGPQMIQLSLDGKRIYVTNSLFSRWDEQFYGQDLVKKGSHMLQIDVDTEKGGLSINP NFFVDFGAEPEGPSLAHEMRYPGGDCTSDIWI</aaseq>

Gene Sequence

<dnaseqindica>110..236#930..1125#1229..1456#1785..2016#2104..2211#2324..2596#2889..3173#gagtgaggcggcgagcggcgagctcctccggtgatccgaggctcgccggccggcgagagcttgcctgtttcgggaggttttcagggtgatctgagagcacagcgagccgatggcggcggcggcgaacggggcggcgtgctgcggtggcgcgacggggccagggtacgcgacgccgctggaggccatggagaagggcccgagggagaagctcctctacgtcacctgcgtctacaacggtaagcgaagatttctatcccaacacagtggacatattatcccactagctacatggagcaatggagacgtctgcgattctgcgttactcacagatcttggggggtttaatcgaggattaatttagcaaggtcaattagactttgctgatgtagagtagtaccacgcgtgctcaagaactgacaactgaaatcacctggattggatggacacagttcttagtttaatcctggaagggatttctttaatactgagtgagtgcttggggtgaaagagacccgtcataaaattagcccgaattcgagtcagtactaatattctacactgtactaaacctgctttagatctccagttttgtcggaattcagttgaacagtgtgtttcgcaactttcccatgggccatattgaggcaatttttaaccacctagtatttgttgtgatgaagacaaaggattagagtgtgtgcgcgctttaatttaattcctgccactttagtggatgagtaaccaaattgattggattttcaccacaaaatgttggttctccatggcagaagaaaacaccatctatatgtccctgtatgtaagctaaggtttacatggtttattcttgacagtctgaacaaaagaataggtcagagtttcttgcaggtgtcatgaatttgttttgatggattatgaatcaacatgaacaggtactggaattaacaagccggattacctgggtacggtggacgtggaccccaattcccctacatactcccaagtgatccacaggctcccagtcacccatgtcggcgatgagctgcatcactctggatggaacgcttgcagttcttgccatggtgatccatcggctagccgccgtttcttgattctgccttcgttgctgtgagtgttaatgtggctatatttagatggatggatgaatcctcgtatctgttgatgttaaacagcgaactggatttgtaaattgctccaatgtctgttgcaggtctggccgtgtgtatgtcgttgacacgctgaaggacccaagggcgcctgccttgcataaggtggtcgaggctgaggacattgctgagaagacagggcttggatttcctcatacatctcattgcctggcatctggggagataatgatttcttgccttggggataaggagggaaatgctgctggcaatggcttcctcctgctggattctgaattcaatgtcaaaggacggtgagttcctttatcacaattctgtgcattttgacgcagaaccatagtatgttaaatgtggacaaaattatagtgggtaatctatcaacataaaaccacctcatccatattttacaacctagcaaaatcatcagtattgtgaagttacgagcatagaagttcatcaatacttgtgactattactatggatgtcaatttaaggacaaattccatcttcgtgttcatttccataatgcccattccaggatatgttccatgaaatgtcaatttatgttacacatatttgcatgacttttgaaagataaccatagtatttcccttctcgcagttgggaaaagccaggtcacagccccttgtttggctatgattattggtatcaacctcgtcacaagacaatgatcagttcatcatggggagcacctgcagctttcaggactggttttgatcttcagcatgtgcaggatggtctctatggaagacatctgcacgtgtatgactggcctggtggtgagctcaagcagacactagatttaggcagtacaggtcttcttccacttgaggtgcgtatcaaatgttgagactaaaagggatgcatcaagccgtcaacatatcaaataaccatatatcactgcttttcttctgtgcaggtgaggtttttacatgatccatcaaaggatactgggtatgtgggctgtgctctgacaagcaacatggtcagatttttcaagactgcagatggatcatggagccatgaggtttgtccataactccatgccaatgttcttgctattttcttgtataaagccctatttgtccaatttgtttagttgtttactctccttatgcttgcatgacatgacatgacaggttgctatatctataaaaccattgaaagtgcgcaactggattctgcctgaaatgccaggactgataactgattttgttatctctctggatgatcgctatctctacttggtcaactggcttcatggtgatatcaggcagtacaacatcgaggaccctgcgaagcctgtgttggctggacaagtatgggcaggaggccttcttcaaaagggcagtgaggttgtgtatgtaactgaggatgacaaagaagagcagtacagtgtgccccaggtcaaggtaattatatctcattcctcttggaattctcagttcataatattatccagaattgttggtacttataatttgttgtagttgttcaatctggttcatttgataagatatcaagtaccaaaatggacctaaaaagtatcaagctactatacttacatccacctgctatcatgctgttggaattgcgtgtacttgttctgaagaacacttcatctgcattggaattgtgtgtacttgttctgaagaacaaattttagtcgcttaaatattactcatatgaaccatcttgtatcagggtcatcgacttagaggtgggccacagatgattcagctgagcctggatgggaagaggatatatgtgaccaactctcttttcagccgatgggacgagcagttctatggccaagatcttgtcaagaagggctcccacatgttgcagatcgacgtcgacactgagaaaggaggactatcgatcaaccctaacttctttgtagattttggtgctgagccagagggtccctccttggcccatgagatgagatatcctggtggagattgcacctctgatatatggatataaagatcttgaaggatttgcatacactcaggtgttgattcatcctgtgtattcactgtaactaagactgtatgcttgctgtggtctatatgtaatttcgatggtaacaagtccccataatacctagaacattcactccatggctcatttggtaacattagcttaataaagagatgtatccaatggtgcactttctgctagtgtttggattttgagctatctgattaaatttctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0916400, RefSeq:Os01g0916400