Os01g0916600

From RiceWiki
Revision as of 05:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0916600| Description = RNA-binding region RNP-1 (RNA recognition motif) domain containing protein| Version = NM_001051730.1 GI:115441830 Gen...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0916600

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001051730.1 GI:115441830 GeneID:4324334

Length

1895 bp

Definition

Oryza sativa Japonica Group Os01g0916600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41710446..41712340

Sequence Coding Region

41711069..41711195,41711282..41711350,41711447..41711553,41711845..41711994

Expression

GEO Profiles:Os01g0916600

Genome Context

<gbrowseImage1> name=NC_008394:41710446..41712340 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41710446..41712340 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccttcaacaagctcggtagcttcctcaggcacagtggcttgacaagcagtgcctcggccggctcttcccctgccatgttcaatgctgctcgtctgatgtccaccaagcttttcgttggtggtctttcttggaatactaatgacgattcgctgaaagaggcattcaccagcttcggggatgtgactgaagctcgggtgatcaatgacagagaatctggaaggtcaagagggtttggctttgttagctttgccaatggcgatgatgccaagagtgccatggatgccatggacggtaaggaacttgagggacggagtatccgcgtgaacttcgcgaatgagagacctccagggaaccgaggtggcggcgggtatggtggtggtggcggtggttatggtaaccaaggaggctatggtgatggcaaccgaggctatggagggcagtactaa</cdnaseq>

Protein Sequence

<aaseq>MAAFNKLGSFLRHSGLTSSASAGSSPAMFNAARLMSTKLFVGGL SWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDAMDGKE LEGRSIRVNFANERPPGNRGGGGYGGGGGGYGNQGGYGDGNRGYGGQY</aaseq>

Gene Sequence

<dnaseqindica>624..750#837..905#1002..1108#1400..1549#aaaaccctcaggtcggcctccctcctctcctcgtccctcctccccgccgccgccgcagcaggtacgtcggcatctcgcctcgttcctcttggattccggatgctcgttccccgacggatctggatgatccattgacccccttcgctggattcggggtcaaatcggtcgttaaggggaggggggggggatggttggttcatatgtacatgcgtgttgttgatggattctactcgttccaccactaggtagaggtgggatttgtttgttgttgatagattctactcgttccaccgctaggtggaggtggggatttgttctctgtatttggttagctattttgtaactagttatgcgattttcggcctctgatttggcttagatccatgcatgaaattggtcaaatcgtttgatttgttatgatttgtggttcgtttgtagttggtcctggttggtttagattagattggtcgaagaccgctgtgagatgaataatcggcggaaaccattttttatggtagggtttccccgtaggccctggattgtttggctgcttatgattaaaaatcactgtgtactgatggttaacaatgcgcggctacgggttttcgcagatttaatcctcaatggcggccttcaacaagctcggtagcttcctcaggcacagtggcttgacaagcagtgcctcggccggctcttcccctgccatgttcaatgctgctcgtctgatgtccaccaagcttttcgttggtggtgagttttttgttttgttgtgttgattctgatggtatgcaaagtagcattttttttacattgacttattccctcttgtctcttaggtctttcttggaatactaatgacgattcgctgaaagaggcattcaccagcttcggggatgtgactgaaggtcagatttctgaataatgtggatacatcttttttctgatgtggtcaatgttgtacttgtttcgggatctaatcagttatagtttacgtgttgcagctcgggtgatcaatgacagagaatctggaaggtcaagagggtttggctttgttagctttgccaatggcgatgatgccaagagtgccatggatgccatggacggtaaggtgagtcaagacaagatccactgctactccttttcaatttgagctactgtcctgtatcattgtgttagtttgagtatgtaagtgtattagaatgttgtggaatatgtttcagttctataacatgtgaatacggtttgttttgagatgcatgcttttctggaagtgtgttttactctctttttttggttttgcctcaccgatgaatgttctgtctagttgtgcctaaattgttgaggacagacatgtacccttgctaggcctcattttgttttgcatttccattgcttgcaggaacttgagggacggagtatccgcgtgaacttcgcgaatgagagacctccagggaaccgaggtggcggcgggtatggtggtggtggcggtggttatggtaaccaaggaggctatggtgatggcaaccgaggctatggagggcagtactaaagtgggcactgacttgcttaaataatgagcttaggacctgatgtggcttatgtgaagccttattattgtttacttttgtaccgtttagtatccgtcgtcgttgaaattctaggtgaagattaaatcttcatattgcactttatatgcttggcgtgaaggcctaggatgcgaatggtgcttttttgtgagtgagaactgagaacacatgcatgtcttcatatctattgcaatgtgtagagggtcattactcgagtgtgtcagcaagtcttattatttcatatttgatctgcatcgagcattcgttcacaagacaaatcgcctgagcagcgtccgtgaacatttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0916600, RefSeq:Os01g0916600