Os01g0917500

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Revision as of 05:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0917500| Description = Protein kinase-like domain containing protein| Version = NM_001051737.1 GI:115441844 GeneID:4324355| Length = 5453 b...")
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Gene Name

Os01g0917500

Description

Protein kinase-like domain containing protein

Version

NM_001051737.1 GI:115441844 GeneID:4324355

Length

5453 bp

Definition

Oryza sativa Japonica Group Os01g0917500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41774248..41779700

Sequence Coding Region

41775540..41779424

Expression

GEO Profiles:Os01g0917500

Genome Context

<gbrowseImage1> name=NC_008394:41774248..41779700 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41774248..41779700 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtatccaatagtttctggcttttcatcctgctagtgagcttcatccccatttctgcttgggcagaatcacgtgatataagtactctgttcactctgagggattcaatcaccgaaggaaaaggctttctccgtaactggtttgattcggaaactcccccatgcagctggtcaggcataacttgcataggacataatgttgtggcgattgatttgtcctctgttccactctatgctccgtttccattatgcattggggcattccagtcacttgttcggctcaacttcagtggatgtgggttttccggagagcttccggaagctttgggaaatttgcagaatctccagtacctagacttgagcaataacgagcttactgggccaatacctatctcactatataacctgaagatgctgaaggaaatggtgcttgactacaactccttgtcaggacaacttagtcctgctattgctcagctgcagcaccttactaagctatctatatccatgaattccatctccggaagccttccaccagatctgggcagcctgaagaacctggagttgttggacattaagatgaacacattcaatggatctataccagcaacttttgggaacctgtcttgtctcttgcactttgatgctagccagaataacctaactggatcaatattccctggaataacctcgttgacaaacctattgacacttgatctatcatcaaacagttttgagggaacaattcctagggagattggtcaactggaaaatctggaattactgattctaggaaagaatgatctcactggaaggattccacaagagattggtagtctgaagcagcttaagttacttcatctcgaggaatgtcagttcacaggcaaaataccttggtcaatcagtggactcagcagcttgacagaacttgacatatcagataacaactttgacgctgagctcccatcatccatgggtgagcttggcaatctaacacagctgattgcaaagaatgctgggctcagtgggaacatgccaaaagaacttgggaattgcaagaagcttactgttataaacctgtcattcaatgcccttattggacctattcctgaagaatttgcagatttagaggctattgtctcattttttgtggaaggaaataaactatcgggtcgtgtcccagattggattcagaaatggaaaaatgcaaggtccatcaggttgggacagaacaaattcagtggacctttgccagtgctgccattgcagcatctgctaagtttcgctgcagaatccaaccttctctcaggttctataccttctcacatatgccaagccaactccttgcattcactcttattgcatcataacaatctgactgggactattgatgaggcatttaaagggtgcacgaacctcactgaattgaacttgttagacaaccatattcatggggaggtaccaggatatttagcagaattacccctggttactctggagttgtcacaaaacaaattcgcagggatgttacctgcggagctgtgggagtcaaaaacccttctagagatatctctcagtaacaatgaaattaccggcccaatacctgagagtattggtaaactctctgtattgcaaaggttgcatatagacaataacttactcgaagggcctatccctcagtctgttggtgatctaaggaatctgaccaatctatccctgcgtggcaataggttatctgggatcattccactagcacttttcaactgcagaaaacttgccacgctggacttgagctataacaatctgactgggaacattccaagtgccatatctcacttgacattgcttgatagcttgattttgtcttccaaccagctgtctggttctatccctgctgagatttgcgtgggatttgagaatgaggctcaccctgactcagagtttcttcagcaccatggtcttcttgatctgtcatacaaccaattgactggtcagatcccaacatctataaagaactgtgcaatggtgatggtgctcaacctccaaggcaatttgctgaatggcaccattcctgtggagcttggcgagctaacaaatcttacatccattaacttgtcatttaatgaatttgttggaccaatgcttccatggtctggacctttggttcaattgcaaggccttattctgtccaataaccacctagatggctccattcctgctaagataggccaaatccttcccaaaattgcagtgctagacttgtcaagcaatgcactcactggcactctaccacagtctttgctctgcaacaattacctaaaccatctggatgtcagcaacaaccacctatctgggcatatccagttctcttgccccgatggcaaagaatactcaagtacactgctcttcttcaattcaagcagcaaccatttctcagggagcctagatgagtctatctcgaacttcacacaattgtctactcttgatatccacaacaatagcctcactggaaggttgccttcagcactttctgatctcagttctttgaattatcttgatctgtcgagcaacaatctctatggtgccataccctgtggaatctgcaatatatttggcctctcatttgccaacttctcaggtaactatattgacatgtacagcttggcagattgtgctgcaggaggcatttgttctactaatggtactgatcataaagcattgcatccatatcatcgggttcgaagggcaattaccatctgtgcctttacattcgtcatcatcattgttttagtgcttctggctgtttatctgagacggaagctggttagaagcaggcctttggcttttgaatctgccagtaaggccaaggctacagttgagcctacctcaactgatgaactgctaggaaagaagtcaagggaacctctgagtatcaatcttgcaacatttgagcatgcacttctgagggtcaccgcggatgatattctgaaagccacagaaaacttcagtaaggtgcacataataggtgatggtggatttggcactgtctacaaggcagcgctccctgaaggccggagagtcgcgatcaagaggctccatggtggccatcagttccaaggtgaccgtgagtttctagctgagatggagacaattggaaaggtgaaacatccaaacctcgtccctctacttggctactgtgtttgtggcgatgaacgattcctgatctacgagtacatggagaatgggagcctcgagatgtggctgagaaaccgagcagatgcacttgaagctcttggatggccggaccgtctcaagatctgcctcggttcagcccgtgggctcgccttcctgcatcatggctttgtgccccatatcatccaccgggacatgaagtcgagcaacattctactggatgagaacttcgagccgagggtctctgacttcggccttgcaaggatcatcagtgcctgtgagacccatgtcagcactgacattgccggtacatttggatacattcctccggagtatggcctcacaatgaagtccaccacgaaaggcgacgtctacagcttcggcgtcgtcatgctggagctcctcaccggacggccacctacaggccaggaggaggtgcaagggggtggaaacctcgtcggctgggtgcggtggatgatcgcccgcggtaagcagaacgagctgttcgatccatgcttgccggtttcaagcgtgtggcgggagcagatggcgcgcgtgctcgccatcgcccgggactgcaccgccgacgagccgttcaagaggccgacaatgctggaggtggtgaaggggctcaagatgacccacggcatggaatgtggacctctggtggtgaccgtctccagggacatgtaa</cdnaseq>

Protein Sequence

<aaseq>MVSNSFWLFILLVSFIPISAWAESRDISTLFTLRDSITEGKGFL RNWFDSETPPCSWSGITCIGHNVVAIDLSSVPLYAPFPLCIGAFQSLVRLNFSGCGFS GELPEALGNLQNLQYLDLSNNELTGPIPISLYNLKMLKEMVLDYNSLSGQLSPAIAQL QHLTKLSISMNSISGSLPPDLGSLKNLELLDIKMNTFNGSIPATFGNLSCLLHFDASQ NNLTGSIFPGITSLTNLLTLDLSSNSFEGTIPREIGQLENLELLILGKNDLTGRIPQE IGSLKQLKLLHLEECQFTGKIPWSISGLSSLTELDISDNNFDAELPSSMGELGNLTQL IAKNAGLSGNMPKELGNCKKLTVINLSFNALIGPIPEEFADLEAIVSFFVEGNKLSGR VPDWIQKWKNARSIRLGQNKFSGPLPVLPLQHLLSFAAESNLLSGSIPSHICQANSLH SLLLHHNNLTGTIDEAFKGCTNLTELNLLDNHIHGEVPGYLAELPLVTLELSQNKFAG MLPAELWESKTLLEISLSNNEITGPIPESIGKLSVLQRLHIDNNLLEGPIPQSVGDLR NLTNLSLRGNRLSGIIPLALFNCRKLATLDLSYNNLTGNIPSAISHLTLLDSLILSSN QLSGSIPAEICVGFENEAHPDSEFLQHHGLLDLSYNQLTGQIPTSIKNCAMVMVLNLQ GNLLNGTIPVELGELTNLTSINLSFNEFVGPMLPWSGPLVQLQGLILSNNHLDGSIPA KIGQILPKIAVLDLSSNALTGTLPQSLLCNNYLNHLDVSNNHLSGHIQFSCPDGKEYS STLLFFNSSSNHFSGSLDESISNFTQLSTLDIHNNSLTGRLPSALSDLSSLNYLDLSS NNLYGAIPCGICNIFGLSFANFSGNYIDMYSLADCAAGGICSTNGTDHKALHPYHRVR RAITICAFTFVIIIVLVLLAVYLRRKLVRSRPLAFESASKAKATVEPTSTDELLGKKS REPLSINLATFEHALLRVTADDILKATENFSKVHIIGDGGFGTVYKAALPEGRRVAIK RLHGGHQFQGDREFLAEMETIGKVKHPNLVPLLGYCVCGDERFLIYEYMENGSLEMWL RNRADALEALGWPDRLKICLGSARGLAFLHHGFVPHIIHRDMKSSNILLDENFEPRVS DFGLARIISACETHVSTDIAGTFGYIPPEYGLTMKSTTKGDVYSFGVVMLELLTGRPP TGQEEVQGGGNLVGWVRWMIARGKQNELFDPCLPVSSVWREQMARVLAIARDCTADEP FKRPTMLEVVKGLKMTHGMECGPLVVTVSRDM</aaseq>

Gene Sequence

<dnaseqindica>1293..5177#tggatgtttcatgggcttcttgatcctatctccaggtttttaggctttacgatgagtggtttgcgtaacttctgcttttattcttgctgatcagagagcagttcctggtttttgttatgatggtgttgtttcttttgggggctaagaccaagataatagtattagtatatccttgtggagttgttggagctatagtggcaactgccaaacacagcccaaccagcattgcttcgagtccttccactagatgttgattcaagtaggataggtttgcttgtttcatgttcttgtacatttgagctgacaatcgcatgaaagctgagtgttcctgttcttttctaattgttcaggatgcatttctgagagggcgtaatggttcagactgcagaaggtaatgaaattgaagttcttcctttgtgctgaatgttcgtagagcttacagtagtgcacctggcatgaattacatgaatcttgcatttcctcttgctcatttgagagaagtggtatcaactctaacgaattctttgcgtcaaaaaaaaaaaactctaacgaattcatttcatgaaaaaaaagttctctactctttgattattttccatctgatctttgtataatgacatagcattaacctttttccaggatgtgtattgcacagttttatctgtcagtcatctatatcctacttgaagttacaaggctacatcttataaggtattcatatacaactacttactgtattctatggtaattgccttcttcttagagtagatgatactgttacagaattctcctgtgtattattggaaattaccgactgttcctgtcttctttccttgcccaacttcaacttggtagacagtttgtatctatagttcggccattacatgttcaagttttaaaaccaagagattcaaggtataaacataatttccctactactaaggaagtcactgttattgtgattgccattatgtctcattgttggtgctttggaggcatagacaagttttaaaaatctacgtttgtcaaatcttctaatctgttgcaggatataaagcagcaatttggccttgacatctatcctggcataaaacaaacaaaacctgattgccacttttgggtgaaattatctttagttctgcagagtagtaatgtatcatttgttgactaattacagtaaacgtaattgaataatttccagacttggtgatatgtggttcttttgcagctactgacatggttaacctcttcatgcagataattgttacagtcccaaaaagaataacgtggaaatggtatccaatagtttctggcttttcatcctgctagtgagcttcatccccatttctgcttgggcagaatcacgtgatataagtactctgttcactctgagggattcaatcaccgaaggaaaaggctttctccgtaactggtttgattcggaaactcccccatgcagctggtcaggcataacttgcataggacataatgttgtggcgattgatttgtcctctgttccactctatgctccgtttccattatgcattggggcattccagtcacttgttcggctcaacttcagtggatgtgggttttccggagagcttccggaagctttgggaaatttgcagaatctccagtacctagacttgagcaataacgagcttactgggccaatacctatctcactatataacctgaagatgctgaaggaaatggtgcttgactacaactccttgtcaggacaacttagtcctgctattgctcagctgcagcaccttactaagctatctatatccatgaattccatctccggaagccttccaccagatctgggcagcctgaagaacctggagttgttggacattaagatgaacacattcaatggatctataccagcaacttttgggaacctgtcttgtctcttgcactttgatgctagccagaataacctaactggatcaatattccctggaataacctcgttgacaaacctattgacacttgatctatcatcaaacagttttgagggaacaattcctagggagattggtcaactggaaaatctggaattactgattctaggaaagaatgatctcactggaaggattccacaagagattggtagtctgaagcagcttaagttacttcatctcgaggaatgtcagttcacaggcaaaataccttggtcaatcagtggactcagcagcttgacagaacttgacatatcagataacaactttgacgctgagctcccatcatccatgggtgagcttggcaatctaacacagctgattgcaaagaatgctgggctcagtgggaacatgccaaaagaacttgggaattgcaagaagcttactgttataaacctgtcattcaatgcccttattggacctattcctgaagaatttgcagatttagaggctattgtctcattttttgtggaaggaaataaactatcgggtcgtgtcccagattggattcagaaatggaaaaatgcaaggtccatcaggttgggacagaacaaattcagtggacctttgccagtgctgccattgcagcatctgctaagtttcgctgcagaatccaaccttctctcaggttctataccttctcacatatgccaagccaactccttgcattcactcttattgcatcataacaatctgactgggactattgatgaggcatttaaagggtgcacgaacctcactgaattgaacttgttagacaaccatattcatggggaggtaccaggatatttagcagaattacccctggttactctggagttgtcacaaaacaaattcgcagggatgttacctgcggagctgtgggagtcaaaaacccttctagagatatctctcagtaacaatgaaattaccggcccaatacctgagagtattggtaaactctctgtattgcaaaggttgcatatagacaataacttactcgaagggcctatccctcagtctgttggtgatctaaggaatctgaccaatctatccctgcgtggcaataggttatctgggatcattccactagcacttttcaactgcagaaaacttgccacgctggacttgagctataacaatctgactgggaacattccaagtgccatatctcacttgacattgcttgatagcttgattttgtcttccaaccagctgtctggttctatccctgctgagatttgcgtgggatttgagaatgaggctcaccctgactcagagtttcttcagcaccatggtcttcttgatctgtcatacaaccaattgactggtcagatcccaacatctataaagaactgtgcaatggtgatggtgctcaacctccaaggcaatttgctgaatggcaccattcctgtggagcttggcgagctaacaaatcttacatccattaacttgtcatttaatgaatttgttggaccaatgcttccatggtctggacctttggttcaattgcaaggccttattctgtccaataaccacctagatggctccattcctgctaagataggccaaatccttcccaaaattgcagtgctagacttgtcaagcaatgcactcactggcactctaccacagtctttgctctgcaacaattacctaaaccatctggatgtcagcaacaaccacctatctgggcatatccagttctcttgccccgatggcaaagaatactcaagtacactgctcttcttcaattcaagcagcaaccatttctcagggagcctagatgagtctatctcgaacttcacacaattgtctactcttgatatccacaacaatagcctcactggaaggttgccttcagcactttctgatctcagttctttgaattatcttgatctgtcgagcaacaatctctatggtgccataccctgtggaatctgcaatatatttggcctctcatttgccaacttctcaggtaactatattgacatgtacagcttggcagattgtgctgcaggaggcatttgttctactaatggtactgatcataaagcattgcatccatatcatcgggttcgaagggcaattaccatctgtgcctttacattcgtcatcatcattgttttagtgcttctggctgtttatctgagacggaagctggttagaagcaggcctttggcttttgaatctgccagtaaggccaaggctacagttgagcctacctcaactgatgaactgctaggaaagaagtcaagggaacctctgagtatcaatcttgcaacatttgagcatgcacttctgagggtcaccgcggatgatattctgaaagccacagaaaacttcagtaaggtgcacataataggtgatggtggatttggcactgtctacaaggcagcgctccctgaaggccggagagtcgcgatcaagaggctccatggtggccatcagttccaaggtgaccgtgagtttctagctgagatggagacaattggaaaggtgaaacatccaaacctcgtccctctacttggctactgtgtttgtggcgatgaacgattcctgatctacgagtacatggagaatgggagcctcgagatgtggctgagaaaccgagcagatgcacttgaagctcttggatggccggaccgtctcaagatctgcctcggttcagcccgtgggctcgccttcctgcatcatggctttgtgccccatatcatccaccgggacatgaagtcgagcaacattctactggatgagaacttcgagccgagggtctctgacttcggccttgcaaggatcatcagtgcctgtgagacccatgtcagcactgacattgccggtacatttggatacattcctccggagtatggcctcacaatgaagtccaccacgaaaggcgacgtctacagcttcggcgtcgtcatgctggagctcctcaccggacggccacctacaggccaggaggaggtgcaagggggtggaaacctcgtcggctgggtgcggtggatgatcgcccgcggtaagcagaacgagctgttcgatccatgcttgccggtttcaagcgtgtggcgggagcagatggcgcgcgtgctcgccatcgcccgggactgcaccgccgacgagccgttcaagaggccgacaatgctggaggtggtgaaggggctcaagatgacccacggcatggaatgtggacctctggtggtgaccgtctccagggacatgtaatgctctctgcttgatcttcctgaaactaatgtagtaataatgtagtcagtagggagtaggctaatggtagttaggagtaactcgtagctatagagtaaccgagctatctggaggctgtaatgagggaaactagagttactcatgttcaggctgtagttggaactagtattaagaccttttatcttgtactattgtcactggtggttcctgtggcaatgtgagtgcttaatgtgctgtcgtttgaataaaagtactgcttgcctgtttctaagtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0917500, RefSeq:Os01g0917500