Os01g0917900

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Revision as of 05:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0917900| Description = Zinc finger, RING-type domain containing protein| Version = NM_001051739.1 GI:115441848 GeneID:4324357| Length = 140...")
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Gene Name

Os01g0917900

Description

Zinc finger, RING-type domain containing protein

Version

NM_001051739.1 GI:115441848 GeneID:4324357

Length

1401 bp

Definition

Oryza sativa Japonica Group Os01g0917900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41791888..41793288

Sequence Coding Region

41792216..41793157

Expression

GEO Profiles:Os01g0917900

Genome Context

<gbrowseImage1> name=NC_008394:41791888..41793288 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41791888..41793288 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcggcggccggagctgcggcggacgatgacgctctcggagcagctgtccgcgcccgaccaggccatccgcgacttcctcaagatcccacacgacggcctcggcggcggcgacggcgagggagggaggatccccgccgccgcgggcgcctccggtggcggcggtggcgtcggtggcatgatcaactggaagccgctgcgtgaccggctccggctacgccgcgccgcgagcgcgtggatgtccgcgtcgcccaagcccgccgcgtcgaacagcggcggcggaggcggcggcggcgcgacgctgagcagcagcaacagcggcagcaaccacagcaacaagtacaactactcccccggcgaggccgcggcggcgttctcgcgcaccttctcccgcacgcggtcgctccgcccgacgccgaccttctcgcgcgccacctccacccgcctcggagccacagccttctccagcggctccaggcgcgccgcggtcgacggcggcggccacgccaatgaggacgacgacgaggaccacaccgacgacgacgacgacgacgacgaagaggagcaaggcaaggacgacgcgcccgcggcgcagatgtcgctgatggcgctactggagcaatcggacagccagtgggactcggaggacgaggacgaccaaggccacggcggtggcggcggcggcgggggcaacggcggcggcggcggcggcggcggcgcgcgcaagaacggcgacggcgacgacgacgaggacgacggcgaggggcgggaggaggagatggtgcacgtgtgctgcgtgtgcatggtgcgccacaagggcgccgccttcatcccgtgcggccacaccttctgccgcctctgctcccgcgagctctgggtcagccgcggcaactgccctctctgcaacggtttcatccaagaaatcctcgacatcttctaa</cdnaseq>

Protein Sequence

<aaseq>MERRPELRRTMTLSEQLSAPDQAIRDFLKIPHDGLGGGDGEGGR IPAAAGASGGGGGVGGMINWKPLRDRLRLRRAASAWMSASPKPAASNSGGGGGGGATL SSSNSGSNHSNKYNYSPGEAAAAFSRTFSRTRSLRPTPTFSRATSTRLGATAFSSGSR RAAVDGGGHANEDDDEDHTDDDDDDDEEEQGKDDAPAAQMSLMALLEQSDSQWDSEDE DDQGHGGGGGGGGNGGGGGGGGARKNGDGDDDEDDGEGREEEMVHVCCVCMVRHKGAA FIPCGHTFCRLCSRELWVSRGNCPLCNGFIQEILDIF</aaseq>

Gene Sequence

<dnaseqindica>132..1073#gcggccataagacgccacctccccttcccaccacgccatcaccaccaccaccaccacctcaccgccgcctcgcacgcagacggcgaggcttccggcgcggcggcggaagagtagcgcgagcgagctgagagatggagcggcggccggagctgcggcggacgatgacgctctcggagcagctgtccgcgcccgaccaggccatccgcgacttcctcaagatcccacacgacggcctcggcggcggcgacggcgagggagggaggatccccgccgccgcgggcgcctccggtggcggcggtggcgtcggtggcatgatcaactggaagccgctgcgtgaccggctccggctacgccgcgccgcgagcgcgtggatgtccgcgtcgcccaagcccgccgcgtcgaacagcggcggcggaggcggcggcggcgcgacgctgagcagcagcaacagcggcagcaaccacagcaacaagtacaactactcccccggcgaggccgcggcggcgttctcgcgcaccttctcccgcacgcggtcgctccgcccgacgccgaccttctcgcgcgccacctccacccgcctcggagccacagccttctccagcggctccaggcgcgccgcggtcgacggcggcggccacgccaatgaggacgacgacgaggaccacaccgacgacgacgacgacgacgacgaagaggagcaaggcaaggacgacgcgcccgcggcgcagatgtcgctgatggcgctactggagcaatcggacagccagtgggactcggaggacgaggacgaccaaggccacggcggtggcggcggcggcgggggcaacggcggcggcggcggcggcggcggcgcgcgcaagaacggcgacggcgacgacgacgaggacgacggcgaggggcgggaggaggagatggtgcacgtgtgctgcgtgtgcatggtgcgccacaagggcgccgccttcatcccgtgcggccacaccttctgccgcctctgctcccgcgagctctgggtcagccgcggcaactgccctctctgcaacggtttcatccaagaaatcctcgacatcttctaatcatcttcttcagaattcagatgcaaaccaagaaatcctcgacatcttctaatcttcttcagaattcagatgcagatagaacgatcatgcagcatggcggtagtagctataagatttgttggttggattggttgatggcgtacgagtggccaattcatgcgccgctccgctgaaaattaacctgaaaaaaaaattgaaacttataggggattcgatcgatcgattgatttgtgtgcaagtgcaacatgaaacgctgaaaacacttgtaatttattggcgttgctgaaagataaataattaataggcggcactgtctcattgatgaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0917900, RefSeq:Os01g0917900