Os01g0918300

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Revision as of 05:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0918300| Description = Ubiquitin-like protein SMT3| Version = NM_001051742.1 GI:115441854 GeneID:4324360| Length = 1968 bp| Definition = O...")
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Gene Name

Os01g0918300

Description

Ubiquitin-like protein SMT3

Version

NM_001051742.1 GI:115441854 GeneID:4324360

Length

1968 bp

Definition

Oryza sativa Japonica Group Os01g0918300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41820255..41822222

Sequence Coding Region

41820492..41820560,41820659..41820808,41822037..41822120

Expression

GEO Profiles:Os01g0918300

Genome Context

<gbrowseImage1> name=NC_008394:41820255..41822222 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41820255..41822222 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggccgccggggaggaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaagggacaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggtcgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacggggacgagatcgacgccatgctccaccagactggaggctgcctgcctgcctag</cdnaseq>

Protein Sequence

<aaseq>MSAAGEEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLK KLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGCLPA</aaseq>

Gene Sequence

<dnaseqindica>1663..1731#1415..1564#103..186#accagcacagggtcgtcgtcgtctccttcctctcgccagtgccaccacagctcaagcgtgatccagcgtcgggccgcgcgtgcgagcgagcgagcgtgcgagatgtcggccgccggggaggaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaagggacaggtctgcctctcttcttgctctcaaactcgtagccttattatccagtagtacataggagtaagtttgttccatagtggatgtatggattgtagaattgagatttgagggttaggttcgattggtaagcccgcaagcgatatagtggcggttgttatgttcggcgatggattcggattgctttgcggagctattagcgtggctgcgaccaagcacttggttcgatggtttgactttgcttgattcgtccagatagggaacgttttgttttatgttgtgctgatgctagtgtgaagttcaatttatgcatgaatcgatcttttgttaggttgttgagtgatgagtttcctgtggatttataatgggaattcgtatttagttgaatgagcatcatcagcgcttggtagtctcacggagtttatggataagggttttatttatggaaggatttgagcttggattactttcatcctaagtttgcagcaacatcttttagatgatttgacaataatgttaactcagtaacactgctagtgtagggtacataaactcaggtttgatgccagcaatctgaggacactgaaattttgatttttgatttttgccataaaaatgctaacttttcagcaaacaagatgaaaaatatggtcagtattgctcgtttaatctgctagagtttgcaaattagtatccatcttccattctttaacttgtatgatatcttgtaaaaatgtggtcagtattccttgtaaaaacttactgtgggttttatgaactgtggggattgtatggttaatactaccttcactaactcttctgttgttcatgctaatgtgtatgctggtctattgaatttgtagcaatagttggaagaatcactcgctcattcatttcaacagattgtatgtttttgttgcatgcaactattgttctgaacgttgtcgtactgcatttttcagtaatgggctaatcttttgcttcctgaaaagtgtggcacaatcgagagcgtactttgttaaatatatcagtttacagtagaaatacgtatcttacaagttacagtcaagtctagagaccataacttcagatgcctttgtttttttccccttgagcatcagaatttcctctgtacatgatattttggttatgcagcactctcgaatgagaaattatttgacaatagttgtgtttttttgtgctcgattcgttaacaatttcctttgttctgtaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggtcgtaggctccgtggcgagcagacccctgacgaggtgcgtagcttatcttctcttcatactcaattcagtatttgcggagcctagcaaatcatcaccaatccattactgatgaccattgcaaacttgttcagctcgagatggaagacggggacgagatcgacgccatgctccaccagactggaggctgcctgcctgcctagaagcttaggagttcttgcagcctcgtaaaattgtgcctttagtaggctcaatatctagaagtacatgaaaaaaaagaagcctaaaagaacttgtgaggctttggtcctgtgccatagctgaaggacattagaagagctttgtttggcaaaaatattttggtacttcggctgttatgactcgtttatccataccctaatatgtccatcgttgctggtgcttggcatgttttcttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0918300, RefSeq:Os01g0918300