Os01g0918500

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Revision as of 05:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0918500| Description = Conserved hypothetical protein| Version = NM_001051743.2 GI:297598194 GeneID:4324361| Length = 2933 bp| Definition ...")
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Gene Name

Os01g0918500

Description

Conserved hypothetical protein

Version

NM_001051743.2 GI:297598194 GeneID:4324361

Length

2933 bp

Definition

Oryza sativa Japonica Group Os01g0918500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41826668..41829600

Sequence Coding Region

41826939..41827475,41827575..41828222,41828422..41828478,41829302..41829574

Expression

GEO Profiles:Os01g0918500

Genome Context

<gbrowseImage1> name=NC_008394:41826668..41829600 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41826668..41829600 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccgcggcggcgtcctcctcctcctcctcgtcggcgacgatggcggcggcggcggcgtcggccgcggaggcgtcgttgtccggctcgcctgcttcttcgaggaacgctcgccatcggcagcgtaagggggtccggctccggatgctgcgacggcgggggcggcagcctgtggaggccgagcgcgccccgggcgatgggggcggtggcgccgtgcaggaggatctcgcgctgcctctcggaatgtccttcgccgccgtcctcgcgcaggttataaatacaaagaatatttcaggacaaagattacatcctgatttcctctccaagatatatggtgacagttccaacagtttcatcaaaaatttcgaaaaatctttcagcagcacttttaggacgcttcatcttgttaatgaaatacctgtgaatgagagaagtcatattcctgaatgttcttttaaacatgatgattctgtggctgtggacagcttgagctcatctgatttgcaaaatcagacaaacagaatagagcatgaccttgtgaacacagtggaaagtcaactagttctctttgccagtgacaatcagcagttaacgcatcttcggcatagcagatcctctcctgaagctgataatcgcattcttaatgccattgatcgctcgaacgaactcaaggaatttgaaatagggcttaccatgagaaagttgcaactcaaacagtcacagttagctcttagttcccattcacacatgttagagaagattaagctatctttcggatttcagaaagcttccttcaaaggagagaaattcaagactcgcatgcaggagacaagagacgcagaaatccttaggacgctaatagattttcttgttagtgctgtgatagttatgtcagcgtgctttggatatggaacttatatttattcgtatcaaaggataacggatgttacgtcagcttgttctgccacatcaaagggatctaagtcatggtggatgccaaattcagtgtcgaacttcagttctgggtttctttttctcaggtgtcatgtaattgccgtaacacgtatgtgctttggcatactaatgatcctggcaattgcttggttagcatttcagcgttcctcaactactgggtcaaatatgcctataacattcaatctcattttgctgggaattatctgcggctttgctggaaggttttgtaccaatacactaggtggcgatggaaacacttggctcatgtactgggaggttctttgttctatccacttacttggaaatctttttccatctcttttataccacgttctacatggacctatttcagtatctcacagagagcaagttgtctggttaccatactgggttcgccggtgcttgttttatgctgcggtggggcttattcttccagccttgactggcttgctcccgtttgcctctctttctgactggaaggatcattttgtggaagagataaaatccattgttatcggtgacaagattgaagcatga</cdnaseq>

Protein Sequence

<aaseq>MDAAAASSSSSSSATMAAAAASAAEASLSGSPASSRNARHRQRK GVRLRMLRRRGRQPVEAERAPGDGGGGAVQEDLALPLGMSFAAVLAQVINTKNISGQR LHPDFLSKIYGDSSNSFIKNFEKSFSSTFRTLHLVNEIPVNERSHIPECSFKHDDSVA VDSLSSSDLQNQTNRIEHDLVNTVESQLVLFASDNQQLTHLRHSRSSPEADNRILNAI DRSNELKEFEIGLTMRKLQLKQSQLALSSHSHMLEKIKLSFGFQKASFKGEKFKTRMQ ETRDAEILRTLIDFLVSAVIVMSACFGYGTYIYSYQRITDVTSACSATSKGSKSWWMP NSVSNFSSGFLFLRCHVIAVTRMCFGILMILAIAWLAFQRSSTTGSNMPITFNLILLG IICGFAGRFCTNTLGGDGNTWLMYWEVLCSIHLLGNLFPSLLYHVLHGPISVSHREQV VWLPYWVRRCLFYAAVGLILPALTGLLPFASLSDWKDHFVEEIKSIVIGDKIEA</aaseq>

Gene Sequence

<dnaseqindica>2126..2662#1379..2026#1123..1179#27..299#gcggcgctttctctctctcccgcgagatggacgccgcggcggcgtcctcctcctcctcctcgtcggcgacgatggcggcggcggcggcgtcggccgcggaggcgtcgttgtccggctcgcctgcttcttcgaggaacgctcgccatcggcagcgtaagggggtccggctccggatgctgcgacggcgggggcggcagcctgtggaggccgagcgcgccccgggcgatgggggcggtggcgccgtgcaggaggatctcgcgctgcctctcggaatgtccttcgccgccgtcctcgcgcaggtgcgtcatggcgggtggatttccttataggcaaaccctgaagaaagtagtagtactagtacttttttcttccttggcgctgttcgtgatcctctctgcgatgttcgtgccatcaaatgtactagcatattgcgtgtagattctgttgctagcgtctcacgaacacggtaatctgagaggttgcgtgctctggatggtagcttagaatgggaaatggaacgttagacgcggcagcttggggccgaggaaattctttgtgctatacttccctcaatggaaatgtcattgagccaaaataaaaaaaagtcattttagttcacagctatatgctcagatttttcacaaataaggggaaaaactaggatgcaaaatgatgagaacaaggaatgattatgaataagacagcagagaaattgggcttgacaatgttgtggctttatgggttatgcaagccttgtacttttgtcaaataagtagtgtggcatttaccgtcttattgcaaaattcaacttcattgctactattattcttcatttccatacttatagtggacatgaaattaaatagtcatttcgataatactaccccgtcatcctgtcattggacattaaattagtcacagttcagcatctcttcatccgaaagcttgcactatagcagcattttgaacacagatgcatatgcatgtgcaaagtctatctaatattcacctgcgtacatctggacatttgcattagtaattataaataaacatgtttgtacaccggtttagccctatgcccttattgttcaggtaacaaggagctgctttcgttgaccgcaggttataaatacaaagaatatttcaggacaaagattacatcctgatttcctctccaaggtacgtgctttctaatttgatttatgaactctgttatccataaacccacaaattgatggtctgaaattgggtttgagtgtagatctgtacatcagcagtcaaggaatctctgacaaatgtaagcccggctaccactattattcagttctcattgtctcttagtattcattgtaatatcctttaattatcgtttctgtagatatatggtgacagttccaacagtttcatcaaaaatttcgaaaaatctttcagcagcacttttaggacgcttcatcttgttaatgaaatacctgtgaatgagagaagtcatattcctgaatgttcttttaaacatgatgattctgtggctgtggacagcttgagctcatctgatttgcaaaatcagacaaacagaatagagcatgaccttgtgaacacagtggaaagtcaactagttctctttgccagtgacaatcagcagttaacgcatcttcggcatagcagatcctctcctgaagctgataatcgcattcttaatgccattgatcgctcgaacgaactcaaggaatttgaaatagggcttaccatgagaaagttgcaactcaaacagtcacagttagctcttagttcccattcacacatgttagagaagattaagctatctttcggatttcagaaagcttccttcaaaggagagaaattcaagactcgcatgcaggagacaagagacgcagaaatccttaggacgctaatagattttcttgttagtgctgtgatagttatgtcagcgtgctttggatatggaacttatatttattcgtatcaaaggataacggatgttacgtcagcttgttctgccacatcaaaggtatgtttatgtagtacatctgttatcactgagtagttttcacttatcgtgtctctttagtaatcggaagctgtttttttcccaccctgtctctttcagggatctaagtcatggtggatgccaaattcagtgtcgaacttcagttctgggtttctttttctcaggtgtcatgtaattgccgtaacacgtatgtgctttggcatactaatgatcctggcaattgcttggttagcatttcagcgttcctcaactactgggtcaaatatgcctataacattcaatctcattttgctgggaattatctgcggctttgctggaaggttttgtaccaatacactaggtggcgatggaaacacttggctcatgtactgggaggttctttgttctatccacttacttggaaatctttttccatctcttttataccacgttctacatggacctatttcagtatctcacagagagcaagttgtctggttaccatactgggttcgccggtgcttgttttatgctgcggtggggcttattcttccagccttgactggcttgctcccgtttgcctctctttctgactggaaggatcattttgtggaagagataaaatccattgttatcggtgacaagattgaagcatgaaatttcttggatgtaaggtggcgcaatacttgtcctgttgtatcttttgaagaagtgaagtttgttcagtttgagattagcctcagagtttagcttggtattgtatgaactccaaaggagattatgctcaagttggttgcacgtagactgacctgttagctgccagcctgccactttgttgtagttggagtgttattttaaacttttttctagttttattcttactttgttgtaaatactcaatagcaagagatgctgtttatctttgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0918500, RefSeq:Os01g0918500