Os01g0919500

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Revision as of 05:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0919500| Description = Zinc finger, RING-type domain containing protein| Version = NM_001051746.1 GI:115441862 GeneID:4324365| Length = 508...")
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Gene Name

Os01g0919500

Description

Zinc finger, RING-type domain containing protein

Version

NM_001051746.1 GI:115441862 GeneID:4324365

Length

5081 bp

Definition

Oryza sativa Japonica Group Os01g0919500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41871756..41876836

Sequence Coding Region

41873861..41874160,41874295..41874370,41876193..41876323,41876406..41876624

Expression

GEO Profiles:Os01g0919500

Genome Context

<gbrowseImage1> name=NC_008394:41871756..41876836 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41871756..41876836 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctctcatgattttgcaagaagggttccgaagaggcggcggactaacaagttgctttcgcaacttcttccggacctgaactcactcccagctgaaggagctgatgatgggggatcaccttccagtagtgtgctcgtctcacacgcccagacttctgctgtagctgtggctggaacctcgcagtatttggtgccagcagttgttgcggggccgcacattggaatgagtagttgtcccattatcgtggatgatatcaatgatgatgttgtgatttattctgcaagctcgttccctcaagtgaggcagcaggctccaaggacagaacctgttgtgaccatagaagatgattctgaaactacccctggacaagcaggggatgcagttgatgagcatgtggatatactactatctctgactctgggcaggtatcctaggcatggtcatcagagatcctccaacatcagcaccagccctgtgatacatataattgacacacctagcaatgcactccctgaacccgagaaggccgttccgaaggaaccaactttcaattgccctgtctgcatgaacgagctggtcgaaccgtcatcgaccatctgcggtcacattttttgcaagcagtgtatcaaggcctcaatccaggctcagaagaagtgccctacctgccggaggaagctgaccatgaacaacttccaccgcgtgtatctcccttctgcggagtaa</cdnaseq>

Protein Sequence

<aaseq>MSSHDFARRVPKRRRTNKLLSQLLPDLNSLPAEGADDGGSPSSS VLVSHAQTSAVAVAGTSQYLVPAVVAGPHIGMSSCPIIVDDINDDVVIYSASSFPQVR QQAPRTEPVVTIEDDSETTPGQAGDAVDEHVDILLSLTLGRYPRHGHQRSSNISTSPV IHIIDTPSNALPEPEKAVPKEPTFNCPVCMNELVEPSSTICGHIFCKQCIKASIQAQK KCPTCRRKLTMNNFHRVYLPSAE</aaseq>

Gene Sequence

<dnaseqindica>2106..2405#2540..2615#4438..4568#4651..4869#agtcgtcgacccccgcgtcccccttcctctgctgggttcgcccgcacgcccgcccgcaccgccgcacgccgccggtcgcccctcctccccgccgacgctgagcaccgccggtccccgtcccgctaggcagcggcgccgccgtcctccgaccgagcccctcgccggtgagcacccgcgcgcagaccctctttaccattcctctacacccacgcgctttctccttgacttaaccttagctttcccttgtaaataaatccgggagattttctcccccttgtcttaaccctagtgctaatggatgtttgggggggttcagatgaaacccccatgcgtgacgttggatccgccgctgcgtaggaacatgtaggtaggggagttgctatgtgtgtggtctagggtatgagccgaataaaccagcggaaatggataatcggcttgttaggtccgccccctttgcataagaattttgtaggtaggaggtgctatgtatgtgggtctaggatatgagccgagtaaagctgcggaaacgattaatcggataattaggttgggaaatttcatagtttgcgatatcactttaggatacgccacagcgcctgttttctaaatgttgaaatgctacctattagtttatgatagctctatgcaagatattttccatcttcaagtagagggattttgatgttctcatgcaataaaatggcaaaacgcgatccaaaaagtatcttgatattgaagcaaaacatcaagaaggccagcttacagtgggttctaacaaacctcaatgcgcgctaataaaccctagacaaacctctacccgtgcgccttccaagatcatgaacaaaacaggtctcctgcggggatcaagtgatgcaaccaggaactaaccaccctggactcgcccccttcaccaaactgtagagtggtagaggcggcagcaatcttcaacttatagcagatggaactggcgaactgccatagtgccatctatctttgtactggggagacatgcttgatgacagccatgcaaaaacgaataaaacaaaccctaggctacaatagttgcagtatatatgacgcaagccctagcgtcttcagcaagaaaaacaaactgcgaatcgtaacataaacgtgtaggacctcctaataaatccattctggttttatgtggtactcacttttgtacagcggctctagtaaaccaactcgagttagttcatgtaccaaggacatgcactctatttaggaaataaatagataaaaggaaacgacaaaagctaaccaattggataactactagacacaactcttgtgccttcctatcttgcgcacgcagagataggatctattttgttcgattctgctcccagctcacaaagatatctactgcatgatcacctttgtgtcaatgcgtgctacagctcctttattgcgcatcaaaatagtgtggtctgtatactcagcccttggattgtcaggcacatttagctcaattcaccaaaataggaagaattccaacttgattaaatatgaaggtttcacatcaagtttctggtatgctagttcgattatctacgccttgcgcgttggacagaccacttggaccttagtgatgaggatgacttagtatcttggcctcttgggacctaggtgaatggaaggttggtgatgctgcctttcgccagtggcaaaatgtgtacaccaaacttgccatttgttcaaaagagaaaaatggaagtggaaaatattttgcaaagatgcccaaagtggcataccccagggctttgatgacaaaacactagacagtggcattttaacaattagaatggaaacgatgggttgatggcatatcctagaccgagaggctagaataccaaagtgggtggtggaaaatcatgaagtttccctattaggttgggtttttggattttgaagtgataggtgggtgtagactgagagcagggcataatccctagctcatacttttaaaagagtaaaggcgtattcaatcctaatagttggaattgtggtttttttatgttgaggtttgaaacttgcaggttcctgctcctattgctcaagccattaggttgcatcgaaacagtatgagctctcatgattttgcaagaagggttccgaagaggcggcggactaacaagttgctttcgcaacttcttccggacctgaactcactcccagctgaaggagctgatgatgggggatcaccttccagtagtgtgctcgtctcacacgcccagacttctgctgtagctgtggctggaacctcgcagtatttggtgccagcagttgttgcggggccgcacattggaatgagtagttgtcccattatcgtggatgatatcaatgatgatgttgtgatttattctgcaagctcgttccctcaagtatgatccttgtgcttggttcttatttctgcatgcacacatatttgttttcttgctcttttattttattatatgattgttcaagttcagtatgaaagaatcattgttgcgctgttgcttcctttatttttcaggtgaggcagcaggctccaaggacagaacctgttgtgaccatagaagatgattctgaaactacccctggacaagcaggtaccccagcacgtccttttccccgtccatattgttggcatttgaacggaactagttattcataccttttgttttctatagtgatcagtttctctcaaataacattatttatctggcatcagattagtgtgaattgttatgctagttacattgtgtgtatccaacataggatagcaattcgtacccattccacattccctagcaggaaattcctcttttagggtatggagatatgggatttgttgcctcccaacattatgctatctgggaatagtctacccctgttgggtgagtcgtggtggtgggaacgtccccatattccatatccctgatccccacttgccccccattaaactcagcgtggtagcccatgtaattgtacaagcatctaaggtatgagagattttacatctatggttagtgcgtcttccacttgttggtttctgagcatcaagaattataacagttacatgaataactgttgaggctgttgccaacttaggtgcccatttgttatgagcccctgcaagaatggaaactagccaactatacacaatattcttgtacagctccgcactcctatcagaaccaaagttttatacacgcgctatttggttgtaagataaacagattcaggctgctgcttgatattgcccattgactataggatataaataatgtgtaggaactcacaccaccgcttgagattgccttgtgtggtagtggggagaagagtgccacaaacacaaagtagtctttctgacttcagaaagttcagttttcttacaactgctatctgtagatgtcactgggttgggtcattagacatagcaagttaccatgtaagattcattagcagaaaaatcagcactaaggatcatttattttattctaatgcttcctagcctttggcaaagtgtgacttgccacctcccccaccccccaaaaaaaagtgccataagagggctaaagctaagcctaagtatgaagctctggcacatggaccatagtggaaaaaaccggaccggtgagtgacccggaggacctctcggttcaccggtccaacggtctgaccagggaaccgctggttgaaccgcggttcaataacttatgtaagcaatgtgtattttctttatcacacaagtgaaagaacggtgggatggctagagccaagcgctctaacctagtagaccctaacctagtagaccaaggttcgagtcctcgcgcctgcaagtatttctctgatttttgtaaaaaacaaccgcgtgggctaggactgggccttactggagcccatgtatatctcctttaccggtccgaccaaggcggtttaatgcccggtttattcaaaacccggccggttcagccggttcaatccgggttggatgcatgtccagtctttcagctggaccgaactgtggagacttctggttccggttttttcaggttgaaccgccggcccggtccggttttttccactatgacatggaccataggaattgaaaaaacgaggttctgtgtaagtcaaggttgtgagaagtaaccgaacacctgtcaaaatgtgtaggatagttcaagttaggtgttgcaaagatgttttaggtctctttgagacatgtactcttttagtatgccatattgccatggcttataaactacaagctggatatgataaatgctattcaatctcacagtatctgccaattctcctcaaaataaaccataggcactaattctcgcagcttttcttctttaaagtttcccgcatgtgtttagaccacattttccatttattaatgtggtgtgtgttgctttgttccaggggatgcagttgatgagcatgtggatatactactatctctgactctgggcaggtatcctaggcatggtcatcagagatcctccaacatcagcaccagccctgtgatacatataattgacacacctagcaatgtactcaaacttgaatttcttcaatacacctatcaggtctgtgatgttcagttaaataatgcagcgtttggtggtaatgcaggcactccctgaacccgagaaggccgttccgaaggaaccaactttcaattgccctgtctgcatgaacgagctggtcgaaccgtcatcgaccatctgcggtcacattttttgcaagcagtgtatcaaggcctcaatccaggctcagaagaagtgccctacctgccggaggaagctgaccatgaacaacttccaccgcgtgtatctcccttctgcggagtaagccggtttccaccattctggaaatcagcgtccctcctcccaccctgactctcgccacattggcgttctgatgattgtatctgaaaatgtttgacaggcttgctagcataccgttttgctggagcagttttaacaggtgttgtactgttgttggatccgttaaaagaatacgattgtatgtcctgtggaaatgatccatgctattaaaggtct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0919500, RefSeq:Os01g0919500