Os01g0921600

From RiceWiki
Revision as of 05:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0921600| Description = Similar to Mitochondrial import receptor subunit TOM20 (Translocase of outer membrane 20 kDa subunit)| Version = NM_0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0921600

Description

Similar to Mitochondrial import receptor subunit TOM20 (Translocase of outer membrane 20 kDa subunit)

Version

NM_001051764.1 GI:115441898 GeneID:4327752

Length

3827 bp

Definition

Oryza sativa Japonica Group Os01g0921600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41996657..42000483

Sequence Coding Region

41996793..41996894,41997042..41997120,41998195..41998364,41998545..41998592,41998880..41998960
,41999987..42000115

Expression

GEO Profiles:Os01g0921600

Genome Context

<gbrowseImage1> name=NC_008394:41996657..42000483 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41996657..42000483 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacatgggagcgatgagcgatcctgagaggatgttcttcttcgacctggcatgccagaacgccaaggtcacctacgaacagaacccgcacgacgccgacaatctcacgcggtggggaggcgcgctgctcgagctctcgcagatgcggaacggccccgagagcctcaagtgcctagaagatgcggaatccaagctggaggaagcactgaaaattgatcccatgaaggcggatgcgctttggtgcttgggaaatgcacagacctctcatggattcttcacttcagacactgtcaaggccaatgaattctttgaaaaggcaacccagtgtttccagaaggctgttgatgtggaacctgcgaatgatctttacaggaagtcattggatttgtcatccaaggcgccagaactgcacatggagattcataggcaaatggcatctcaggcttcacaagctgcatcctcaacctcgaatacaaggcaatcaaggaagaagaagaaggatagcgacttctggtatgatgtcttcgggtgggtggttcttggggttggcatggttgtctgggtgggtcttgccaaatctaatgccccgccccaagctcctaggtga</cdnaseq>

Protein Sequence

<aaseq>MDMGAMSDPERMFFFDLACQNAKVTYEQNPHDADNLTRWGGALL ELSQMRNGPESLKCLEDAESKLEEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANE FFEKATQCFQKAVDVEPANDLYRKSLDLSSKAPELHMEIHRQMASQASQAASSTSNTR QSRKKKKDSDFWYDVFGWVVLGVGMVVWVGLAKSNAPPQAPR</aaseq>

Gene Sequence

<dnaseqindica>137..238#386..464#1539..1708#1889..1936#2224..2304#3331..3459#ctcctccgtcctcctctctctccccaaatcgaacatcgagagagagagagagagaggtctaaaaccctaacccccgaatcgaatctcgtcggaagccgccgccgccgccgccgccgacgacgacgcccgcgacgccatggacatgggagcgatgagcgatcctgagaggatgttcttcttcgacctggcatgccagaacgccaaggtcacctacgaacagaacccgcacgacgccgacgtaagccccttcctcgcctcgagcctttttgagactctgcttgattgcttgcttgcttttcctgatggtttgggttgcttctgattggatgcgacgcgacgcgatccgatctgatggtgggtttgtctttgttgttcttcgtcgcagaatctcacgcggtggggaggcgcgctgctcgagctctcgcagatgcggaacggccccgagagcctcaagtgcctagaaggtataccgtgagatctcgaaacttggttgtgcggattattcggtgatttggactgtttacttgtagagatgttggagttgatgcttcctaggggctattgtaaccaatgggattgagatttctgtgtgtgttattcagcattaatggattcggttggtctggaagggccaaatctttgcaaatcgtgttctacaagtcaagctaatccttagcaattagattgacttttgttctcatgataattgaaaagctcaaacctaatatattgtttgcttaaagtaaaaggtacaatgttcttaaaggaaaatttgtcatgctgttttattaacaataagaaaaggataaaatcctgctggtatgacatgggaaggtaatcacaacttgttctgcctagtttagtgactggataactgttctacccacggttatgtggtttttcatttcagtacctcaaacatttagggcactcgtaggtggtgcattcaatttcattatatgcagtttaggaaccgctactgttttctgatggtgcttgtctatccattcatgagtttagacaactttgcatgtttgatgttttcctttttaaggtattatttgggatgaaaaaaagaagatgatgacgggattcatcaaaatcattcaataatccagcagtgcactacacatcagatgattaatgagaagaatgctattcttcacccaattgttcagactgaatagtttttcctgggcctactgacataattttatcaagttatatgtaaatgctgggagctgttcgtttgcttgatgtattttgttgattctttgttaaagttaagagtatgatcacattttagctaggaagtaggataatatggtgggtgcataatcaagtattggaatggaaagcaattgattgttcttgtgccgtctgggctgttcaattgaagtaacagtactttgttggtggcttaacatgcacatgtgttatgagttttgttgcacattaatttgtgtattttgatgtcagtagaagttactcaatttgttcaaattgaagtatactgatccagttaattttatttatagatgcggaatccaagctggaggaagcactgaaaattgatcccatgaaggcggatgcgctttggtgcttgggaaatgcacagacctctcatggattcttcacttcagacactgtcaaggccaatgaattctttgaaaaggcaacccagtgtttccagaaggctgttgatgtggtatgtgtagtttgctagtatgcttccgcaaacacatttccttgttccatggtggaggctgacctgcagtcctgaagttgtgtggcctaaaaccgtcacaggagcctcctgatgttcttttgctgtaaaataagtgcctttttttatctggaaactaatgtacagtcctgtttcttgtaggaacctgcgaatgatctttacaggaagtcattggatttgtcatccaaggtgctgacaacactttatgtttagcactatttgtgcgatctttgttacaataatgctaccattggtttatacgctgcaaatagaacatttgaggtctctagttaacaactctgattacagcaagttctgactacacctttcaaaggatttcataatcctaactgcttcacatcttaaccttgtactccctccagtcatgacagattgacgccctataatacatgcagatgttatgttaagaagtgcttgtatcatactgtacttacactatttgtttcaaatctcaggcgccagaactgcacatggagattcataggcaaatggcatctcaggcttcacaagctgcatcctcaacctcgaatacaagggtattctgtcttaacattgcaggactttactctcttacctgtcagaaataagaattgcacagctactcttttttcttccaaaatttatatggctatcaatttttgttatgtttgctgcctattttcgaatcttgcatgcatcttcttattaagcatttttcagtaggcaaattagtaaattattatttttacttcctaatgtacctgttttgggttggctacacttacattggtatgtgctctttagagatgaatgtaagttggagattttcttcctgagcatatattggctttgttactatttctcaaataacaaagatgataatctgtattgtggaaaatagagcagcccaccccacatacaattgtgaactggatatactatggttattattaactagtagaataaggtaacagtagtagggaggcagtacaaattgatttggcgcgtcattactgttctgagcaattgagccaatctatctgcaaggatctcagtaactctttgtgttggatatatctgtgttggtacttactaccttgttgagttgttggcctatacacatctcattgtagtcatttgctagaaagttgaaaattagtccctgggctctattctgacaacctgcataatcaattgtgtactcggagcataaagctttgactctaagcgttttcagttttagccataagttgatatagtagtttggttcaatatactcccaagtaatattatcttacttacattgatttgattgtattgatctgatcccagaagatttggcataattttcacatggtagattttaaaatatatgtagacaatgatcctacattttccatccctgcaaagaacccatacccaagtcaggctcgtgattctgaaatcctttgggtatatgagtatattttctgatgaaaactgctagctgactttgatttttaacgttattctgtagcatgtataactgttgcctgatccccttatctttcccttatccaaactgataacgtggtggtttgcagcaatcaaggaagaagaagaaggatagcgacttctggtatgatgtcttcgggtgggtggttcttggggttggcatggttgtctgggtgggtcttgccaaatctaatgccccgccccaagctcctaggtgaggtgggtcgtcttccaacactacctgcagaaggcagcgtgcctatgttaggtgcctcagacttcaaatcttgctagtggctagttaatcatggagaggaactggtgtttccatgttacagtttggtcagattttcaatgcctgatatccttttccagctttgatgaggtttagatgagtcataaatcaacacttattgatacttgtttatcccggtattgttttgaggcaaaaactattattactatgttttgatcgttttatcaatgctatctgcattatatatactgccacactgggtgctattgtatggtgaacggcatcctttcttttattaagcacataatgctcagctgttgtctgaatccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0921600, RefSeq:Os01g0921600