Os01g0922600

From RiceWiki
Revision as of 05:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0922600| Description = Similar to SBP-domain protein 4| Version = NM_001051768.1 GI:115441906 GeneID:4327245| Length = 3360 bp| Definition...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0922600

Description

Similar to SBP-domain protein 4

Version

NM_001051768.1 GI:115441906 GeneID:4327245

Length

3360 bp

Definition

Oryza sativa Japonica Group Os01g0922600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42127113..42130472

Sequence Coding Region

42127113..42127225,42128409..42128539,42129360..42130051

Expression

GEO Profiles:Os01g0922600

Genome Context

<gbrowseImage1> name=NC_008394:42127113..42130472 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42127113..42130472 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tccaagtgcgtccgcgactaccaccggcggcacaaggtgtgcgaggcgcactccaagacggccgtcgtcaccgtcgccggccagcagcagcgcttctgccaacagtgcagcaggtttcatttgctcggggagttcgatgaggagaagaggagctgcaggaagcggctcgacgggcacaacaagcggcgtcggaagccgcagcctgatcctctcaaccccggcaaccttttcgccaatcaccacggagcggcaagattcacctcgtacccgcagatcttctcgacggcggcgtccatgtcgccgcaggagacgaagtggccggcgaacgtggtcaagacggaggccgccgacgtgttccaagagccgtactaccacgccctccacctcaacggcgccggcgccgccgcggccgcctccatcttccaccacggcggcaacaaggcgaggaagcaccacttccctttcctgacggccgaccacggcggcggcgccgccgcggcgtcgccgttgttcgggtgccagccgttcaccatcacgccttcctcggagagcaggagcagcagcagcagccggcacagcaacggcaagatgttcgcccacgacgggggtctggacaactgtgctctctctcttctgtcagacaaccccacacccacggcgcagatcaccatcccacagcctctcttcgccggcggcgggcagtacggcggcggcggcggcggcgacgtgtcgctcaccggcctgtcctacgtcagaatggccggcaaggacacgtccatcttggcaaaatctgccactaccactgctactactgctactactcctactaccacaagtgcacagctgcaataccatggctactaccaccaccatgtcagcgccgatcagggtagctccgatgctgcaatccaggctcttcctttctcatcgtggtag</cdnaseq>

Protein Sequence

<aaseq>SKCVRDYHRRHKVCEAHSKTAVVTVAGQQQRFCQQCSRFHLLGE FDEEKRSCRKRLDGHNKRRRKPQPDPLNPGNLFANHHGAARFTSYPQIFSTAASMSPQ ETKWPANVVKTEAADVFQEPYYHALHLNGAGAAAAASIFHHGGNKARKHHFPFLTADH GGGAAAASPLFGCQPFTITPSSESRSSSSSRHSNGKMFAHDGGLDNCALSLLSDNPTP TAQITIPQPLFAGGGQYGGGGGGDVSLTGLSYVRMAGKDTSILAKSATTTATTATTPT TTSAQLQYHGYYHHHVSADQGSSDAAIQALPFSSW</aaseq>

Gene Sequence

<dnaseqindica>1..113#1297..1427#2248..2939#tccaagtgcgtccgcgactaccaccggcggcacaaggtgtgcgaggcgcactccaagacggccgtcgtcaccgtcgccggccagcagcagcgcttctgccaacagtgcagcaggtacgtgacgtcacccccatgcatttctctacttcctcctcaatttccatttcatttctttgaaaaacaaaatatacatgtttcatttccttttcagaaaacgagaatttgcatgcagatttagttggtgtaaattttttttgtgtggttattacgggtggatttgatttttggcgctgttttagtttctgtccgtttgctatcatgacgcttttttggcgtttgcaattaacaagccgacgtgcagccaccaccacaccccgaaacttctggtatccatctgtttccaaccccacagtaattcagaatttcagaccagttcaatccttttacgtacgcagccccaaaggttgaatacttgaatctttatacaaacagagcaactcaaagttcaattcttatcctttttattttttaaaaaaaactatgaagtttaattaggctagaatcaccagctagcctatccaaacagagcaactcaaagttcaattccttttgaaaaaaaaaagagaaactaacttatttagacatagcaactcaaagttcaatgtttttggttaaaaaaaaactcgagtttttgattaggctagaatgaccaactaacctttggtggagatcaattttgatttctgggtggtgatctggtccctggagcctgaagaatctgaaccagacaaagcatttgcattggccacccgtgcttcctcttcttcctcgggagggacactgtctttctgtccccacgacgacgcagcagcgcaccaccatggcagcagcagcagaataggcaagatacaatggaactggcactacttgcagggccatgccaatgcttttcccggtcgcattcgtggctcactcgcgcaacaccaacgattttggcaccttccaccctgcatctgctgctgctgctgctcctcgttccagatgctcacctggccacgacaaacgatattccagtcccatccatatgctcagcttaattctttcacagtttcactccggcaattactagcaccaaccagtagatctagctctcatttggatacttctgaatgatcattcatttgagatttgcatcacacataagtacataacaatggattcagattcagagattcagggaagcccctgtgaccggatggatgaattgattgtttgatgttgttgttttctttgacaggtttcatttgctcggggagttcgatgaggagaagaggagctgcaggaagcggctcgacgggcacaacaagcggcgtcggaagccgcagcctgatcctctcaaccccggcaaccttttcgccaatcaccacggtatgcaattgcaaaccatatgttcttgagattgttctgttcttgacagcacgaaaattatccacaacaatcctttttttttactgtcgttaagtagtaatactatttgtgatatctcctaagattaaggtgtaatatgaattaagttagaaaaatacagtatgatacactgatactgtacctgagggaccgtagaaaagctctccataattggcaagccgcatgcatcagcctacagtttggaaaggacgtgaataaagttttcgttttcatagctgacagctgaaatagcacttgaaagcgaagcagaaaattttgacatttttcatccccgttcggtttgatcgaactattttagtgcgacctactaaacctgacatttcttatctcctcccagttgactggcagtagtaaacgtttgcattacatgatacaagtaaaactactgtagctgtctgaaagcgcaaagttgacctgaattggagtcgtgtgatatatcatgtcatcatggaaaatccaccgtagtttttggaccttgcatcttggatcatctaggacaggtcattttcaacaattccctgaggaatcgttcataaactagagcattgactcgccgctgcatatctgaaaaacaatattataaaaataaatcatatcatagcgttggacgttagcagtaacaaatttatcatcagagaatatcttccaagaacaggagctgtacctgaattctgccaagaaacgcaaatagttgagtgacaatgttttggctcatgagacgtcggcctcactgttggtatccatcgctttctgtgtgcaggagcggcaagattcacctcgtacccgcagatcttctcgacggcggcgtccatgtcgccgcaggagacgaagtggccggcgaacgtggtcaagacggaggccgccgacgtgttccaagagccgtactaccacgccctccacctcaacggcgccggcgccgccgcggccgcctccatcttccaccacggcggcaacaaggcgaggaagcaccacttccctttcctgacggccgaccacggcggcggcgccgccgcggcgtcgccgttgttcgggtgccagccgttcaccatcacgccttcctcggagagcaggagcagcagcagcagccggcacagcaacggcaagatgttcgcccacgacgggggtctggacaactgtgctctctctcttctgtcagacaaccccacacccacggcgcagatcaccatcccacagcctctcttcgccggcggcgggcagtacggcggcggcggcggcggcgacgtgtcgctcaccggcctgtcctacgtcagaatggccggcaaggacacgtccatcttggcaaaatctgccactaccactgctactactgctactactcctactaccacaagtgcacagctgcaataccatggctactaccaccaccatgtcagcgccgatcagggtagctccgatgctgcaatccaggctcttcctttctcatcgtggtagtggagattccgggttccgatttcgatctcagcgaggccctgttcttgagctgaattcctgatagatcagatgctagggagatggtaatgttgttcaacaaaatatgtcagtgataatagttgtattatcttggtgatactgaaaaatattcaccacgatatgcacattttccaactttgcctggtatttccagtttatgggaaatacccccaagccagcttatgattcacaattgcattattagaactagtgctattatttttggagggttattgacttgtactgtagtggtacagcttttgttgtgtgtacatttggctatccacttgattggtgtaggggctagttcagcaggaactagacataagttaactgtacttgaatagtcaaattagcctcaaaagctggaggattactgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0922600, RefSeq:Os01g0922600