Os01g0923800

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Revision as of 05:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0923800| Description = Similar to Chaperone protein dnaJ| Version = NM_001051777.1 GI:115441924 GeneID:4327255| Length = 4212 bp| Definiti...")
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Gene Name

Os01g0923800

Description

Similar to Chaperone protein dnaJ

Version

NM_001051777.1 GI:115441924 GeneID:4327255

Length

4212 bp

Definition

Oryza sativa Japonica Group Os01g0923800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42233080..42237291

Sequence Coding Region

42234640..42236874

Expression

GEO Profiles:Os01g0923800

Genome Context

<gbrowseImage1> name=NC_008394:42233080..42237291 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42233080..42237291 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtgcaacagagatgatgcaattcgatcaaaggagattgctgaaaggaagttcaatgagaatgatatcgctggtgcgaagaggtttgccttgaaagcaaagactcttttcgactcgcttgaaggtattgataatatgatttctgccttggatatccacataagggcacagacgaagattgaaggggagaatgatttgtatggaatattagatatatcggcctctgatgacgatgaaaagatcaagaagcagtacaggaagttggccttacaaactcatcctgacaagaataaattttctggtgctgaaagtgccttcaagctcatccaagatgcttgggatgttctgtctgataaggacaagaagagatcatatgatcagaagaggtttggtggttcctcaagagtatatcagaatggctttgcggaaaatgctaatgccactcctggttccactatgtcaagtatgaatggtttcttctggcaaaattctggtaggcacccttcttatgcaacagacacattttggacatactgtgattcttgtcaaatgagttttcagtactccagggaatacgtcaaccgaaatctggcgtgtagtttctgccaaacagaatttgttgctgttgaaactccacccccaactgctccagtttactataatgtgaccaatttaatggacactagcagtaatatggatgacccacaaggaacaggagtaccttatagcagcaacaagatttttgatcctgtgctgcagccagttttcggttctgtaggcggtgcacacgcctctagatatccagttcaacagacatgcaagcctgctagaaaggaggaggtagctgaagttaatgtagccagaagagaagaggcaactaaaaggaaacatgaacaagcaagttcttcccttggatcatcaagttcagctgcaaaagtcatccacagaagaaaagcagtgacaaaggaaatggaagctgaaaagaggagatgcatcaacaacaaaagtaaagtttctggtcaaaagaacaacacaaataaagttgttgggaagtcaacaagttctgccgctgatggtgattcaggtccacagatgcatccagcaaaaagaaaatctgcttcttccattggaacatcaggaacaaagaggcgtaaaatgccttctgatcataattctggtaatgctaggactagctttggaaaagtgttcctgcagttggagacagagatcccaggcttaaaaatggagaagatgaaacttcaaattcgggacaaactagaagaattcaaaagtagaagggccaacgtagaaaataaaggaaacgtgcatgtgagtttagaaaaaaagaagacatggaagtggaagaaacctgcaacactctttgtatacacaaggagaaaccgtaaggaacacaggaaagagcctggagtggatgccattggtgctggttcttctcacaagcatttggatggcaaatatagttgcttggatcaagtgccatcttctgatgaaggatcttgtgtaatgccggtccccgaagcagatttctacacttttggtgatcatcctgaaacttcttttcaaaatggccaaatatgggctgcatatgatgaagaagatggtatgccacgctactatgctttgattcagaaggtgctctcgagacatccttttaaagttagactggctttcctcaaagcaaaggactgcagtgaatttgtaacttcaaattggatctcatatggttactccaagacctgtggtgatttcatagttggtacgccaaaaaatactgaccaactgaatacattttctcatgttgtcacatgggagaaaggcccaggtggtatcatcagaatttttcccaggaaaggtgatatctgggccctatatcagaactggtctcctgaatggaatacatgtacacctgatgataccatatacaagtatgacttggtccaggttcttgatagctacaacccaagtgcaggcatttctgtcatgcctatagtgaaggttccggggttcgtttcagtgtttacgccccttcttgacccaacgaaaagcaggacaattccgaaggaggagatgctgcgattttctcaccaggtgccattccatgtccttactggagaagaagctaagaattctcccaagggatgctatgaattggatcctggttctactccgaaggaacttcttcaagttgttccacaatctgacggcgtataa</cdnaseq>

Protein Sequence

<aaseq>MECNRDDAIRSKEIAERKFNENDIAGAKRFALKAKTLFDSLEGI DNMISALDIHIRAQTKIEGENDLYGILDISASDDDEKIKKQYRKLALQTHPDKNKFSG AESAFKLIQDAWDVLSDKDKKRSYDQKRFGGSSRVYQNGFAENANATPGSTMSSMNGF FWQNSGRHPSYATDTFWTYCDSCQMSFQYSREYVNRNLACSFCQTEFVAVETPPPTAP VYYNVTNLMDTSSNMDDPQGTGVPYSSNKIFDPVLQPVFGSVGGAHASRYPVQQTCKP ARKEEVAEVNVARREEATKRKHEQASSSLGSSSSAAKVIHRRKAVTKEMEAEKRRCIN NKSKVSGQKNNTNKVVGKSTSSAADGDSGPQMHPAKRKSASSIGTSGTKRRKMPSDHN SGNARTSFGKVFLQLETEIPGLKMEKMKLQIRDKLEEFKSRRANVENKGNVHVSLEKK KTWKWKKPATLFVYTRRNRKEHRKEPGVDAIGAGSSHKHLDGKYSCLDQVPSSDEGSC VMPVPEADFYTFGDHPETSFQNGQIWAAYDEEDGMPRYYALIQKVLSRHPFKVRLAFL KAKDCSEFVTSNWISYGYSKTCGDFIVGTPKNTDQLNTFSHVVTWEKGPGGIIRIFPR KGDIWALYQNWSPEWNTCTPDDTIYKYDLVQVLDSYNPSAGISVMPIVKVPGFVSVFT PLLDPTKSRTIPKEEMLRFSHQVPFHVLTGEEAKNSPKGCYELDPGSTPKELLQVVPQ SDGV</aaseq>

Gene Sequence

<dnaseqindica>1561..3795#gtctcgtctccttcctcggctcggcattttcgcgaaatccgcaacaaaatccacggcggcaacgaagcccgggggcggggggaccctacagcgcagccgcacagagaaggggaaggaagcctactactctactagtcctacccctaccctaccctacggcctagggggagggggggaggagagaatccaccaagtgaagggtgagctccccccccccccccccctcccccctcttcctaatttcgccaaattccgggggctaaaccggagaagaggtcgatctcgctctctctttcgcgcgcgctaaaccggggggtgctctcgcgttttggggcggcggcggaggtttcgccgccggcggcggttgtgtgtagatgggggtgggtggatgggggtttcgttcgttgatcagtggagaaataatgttggtatatgcaggtttaggaggggatcaatcgagtttttcaatctaaatgcggtcactaatattttttttcttatatgcatgtaattacctgcgtcaggagtgtgggggatgtgagctgctgtgtgtgatacacacacggattacagtttttcttgttccatttgtgtgatccatttaaccagcccgcgcatatacttgattttgatgttgggtggggggcattttttatcaactactgtagtctgtggggggtttaggtagatacaaacagcctcatggatggtaattgtaattaatctagggtgttctttcatgtttcgtaggggttggatattattactaatgataaatgtaatctagggtgttctttcatgtttcctagtagttggatgttattactgtctacttatggattgtgacatagtggtactaggggccatttatgtatgaaaatgaaaatgagtactagggggtgcatttatatgttcggattatgtgttagccccacaaagagtacacaatcactaaacaaactcattgccacctttggtgcgatagctacttctttcggaatgtgtgttgagcattttggtggaaagtgtggtagccataaacacggagtaaatgtgttgagtattaaaatttgcgctatagagaagattgtgctaccaaatgtttcatacaatccataaatgggcatagtgtttggctgttttccttgcaaagcataatgtttcaaaaataacctcatggatggtaattggagactatcgtgtttgttcatgttttcataactttcatttgatattattaaatgagttttgtgtgaatagaggatttggcgctatcaataatatctcatgcgtgggatcaataaccataatatttcattgttttccatagaagtgtattagcttgtaattgtagtcgaaagacttctagtatattcctgaaatgtagtttcactaagaatattaaatgtggcatcatagagacaagtgcacacaaagtgtgccgaacattttgtgtactgtatcaacaaagtgtttgaaaatgtcatagctgagtgttttcttttgagttataagttatgatttctttatgaaatgagactaatatatttttctacagatatggagtgcaacagagatgatgcaattcgatcaaaggagattgctgaaaggaagttcaatgagaatgatatcgctggtgcgaagaggtttgccttgaaagcaaagactcttttcgactcgcttgaaggtattgataatatgatttctgccttggatatccacataagggcacagacgaagattgaaggggagaatgatttgtatggaatattagatatatcggcctctgatgacgatgaaaagatcaagaagcagtacaggaagttggccttacaaactcatcctgacaagaataaattttctggtgctgaaagtgccttcaagctcatccaagatgcttgggatgttctgtctgataaggacaagaagagatcatatgatcagaagaggtttggtggttcctcaagagtatatcagaatggctttgcggaaaatgctaatgccactcctggttccactatgtcaagtatgaatggtttcttctggcaaaattctggtaggcacccttcttatgcaacagacacattttggacatactgtgattcttgtcaaatgagttttcagtactccagggaatacgtcaaccgaaatctggcgtgtagtttctgccaaacagaatttgttgctgttgaaactccacccccaactgctccagtttactataatgtgaccaatttaatggacactagcagtaatatggatgacccacaaggaacaggagtaccttatagcagcaacaagatttttgatcctgtgctgcagccagttttcggttctgtaggcggtgcacacgcctctagatatccagttcaacagacatgcaagcctgctagaaaggaggaggtagctgaagttaatgtagccagaagagaagaggcaactaaaaggaaacatgaacaagcaagttcttcccttggatcatcaagttcagctgcaaaagtcatccacagaagaaaagcagtgacaaaggaaatggaagctgaaaagaggagatgcatcaacaacaaaagtaaagtttctggtcaaaagaacaacacaaataaagttgttgggaagtcaacaagttctgccgctgatggtgattcaggtccacagatgcatccagcaaaaagaaaatctgcttcttccattggaacatcaggaacaaagaggcgtaaaatgccttctgatcataattctggtaatgctaggactagctttggaaaagtgttcctgcagttggagacagagatcccaggcttaaaaatggagaagatgaaacttcaaattcgggacaaactagaagaattcaaaagtagaagggccaacgtagaaaataaaggaaacgtgcatgtgagtttagaaaaaaagaagacatggaagtggaagaaacctgcaacactctttgtatacacaaggagaaaccgtaaggaacacaggaaagagcctggagtggatgccattggtgctggttcttctcacaagcatttggatggcaaatatagttgcttggatcaagtgccatcttctgatgaaggatcttgtgtaatgccggtccccgaagcagatttctacacttttggtgatcatcctgaaacttcttttcaaaatggccaaatatgggctgcatatgatgaagaagatggtatgccacgctactatgctttgattcagaaggtgctctcgagacatccttttaaagttagactggctttcctcaaagcaaaggactgcagtgaatttgtaacttcaaattggatctcatatggttactccaagacctgtggtgatttcatagttggtacgccaaaaaatactgaccaactgaatacattttctcatgttgtcacatgggagaaaggcccaggtggtatcatcagaatttttcccaggaaaggtgatatctgggccctatatcagaactggtctcctgaatggaatacatgtacacctgatgataccatatacaagtatgacttggtccaggttcttgatagctacaacccaagtgcaggcatttctgtcatgcctatagtgaaggttccggggttcgtttcagtgtttacgccccttcttgacccaacgaaaagcaggacaattccgaaggaggagatgctgcgattttctcaccaggtgccattccatgtccttactggagaagaagctaagaattctcccaagggatgctatgaattggatcctggttctactccgaaggaacttcttcaagttgttccacaatctgacggcgtataaaataagtcccgtagctgatgctgatgctagctctagcttgtacttagtggctgaactattttttcgcttttttatatcctggaatcattggggtaataccggtttctttagtattgtacaatactacaatacatacccaatgctgtgtatgttttgacctgtaagctccccatgttgttttgatgtattagtaaacatggctatctgtaagttcctagatatttctggccagttagccatattattatttcttgatgtttctcatcaagagcagtagaaactttagaatattgctgacctgttgttgtgcatggagttggtgatggtcgtcacagttggccgagatatttaactatttggaggtcaaatatctcgttcaggaaaaaagggtgagatgtggaagtatatctcgttcac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0923800, RefSeq:Os01g0923800