Os01g0925300

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Revision as of 05:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0925300| Description = Zinc finger, DHHC-type domain containing protein| Version = NM_001051790.1 GI:115441950 GeneID:4327233| Length = 308...")
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Gene Name

Os01g0925300

Description

Zinc finger, DHHC-type domain containing protein

Version

NM_001051790.1 GI:115441950 GeneID:4327233

Length

3087 bp

Definition

Oryza sativa Japonica Group Os01g0925300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42361530..42364616

Sequence Coding Region

42361911..42362351,42362447..42362680,42363034..42363330,42363536..42363718,42364339..42364425

Expression

GEO Profiles:Os01g0925300

Genome Context

<gbrowseImage1> name=NC_008394:42361530..42364616 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42361530..42364616 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacggagcaagctccggcggcggcggcggcgccggtgccggcggggatgggccgttggtgtaccagcgctggaaagggaacaatgtgtttgttcttcaggggaggtttatatttggacccgatgcaagatccttgtacgtcaccatgttcctcatcatcgcgccagcgtcaatcttttgtttgttcgttgccaaagaactgatgaataacttttcttatggtctgggattaccagtaatgatttcagcagttgtgttcacggcatatgacttgagccttctacttctcacttctggtagggatccaggtataatacctcggaatgcacaccctccagaacctgaaggtttggatggcaatgcagaggttggatctaaccagactccaccaatgcgtttgccccgagtgaaggatgttgttgtcaatggaatcactgtgaagacaaaatactgtgatacctgcatgctgtaccggcctcctcgttgctcccattgctctatctgcaacaactgcgttgaacgttttgaccatcactgcccatgggttgggcaatgcataggacttaggaattacaggttcttttatatgtttgtcttctcaacaactctgctctgcctctacgtctttgggttctgctgggtatacattgttaagatcagaaactctgagcagataacaatatggaaggctatggcaaagacccctgcttctattgctctgctagtctacacatttattgccgtttggtttgttggtggcctctctgtatttcacttgtatctcatgagcaccaaccagacaacatatgagaacttcaggtatcggtatgatcaacgggccaacccatacaacaggggagtcatggagaacattaaagatatattcttctctgcaattcctgcctccaagaacaacttccgcgccagagtcccagttccacaggagcaaggtctgaggcctcgcccaaccaatggtttcatgagtccaaacatggggagagccgtcggtgacattgagatgggtagaaagccggtggcatgggatgagccaaggatggcagccgatatcggcgatctgggagcaggcctgggcaacttgttggaggacaaggatggcaggtttcgcagtgcatctccagatctaagccgtgacgccctcgcaatcggaggcctggatgatcaaggatcctcagtgatgaacccagggcgtacaagctggggagttgaggcaggtcgatga</cdnaseq>

Protein Sequence

<aaseq>MNGASSGGGGGAGAGGDGPLVYQRWKGNNVFVLQGRFIFGPDAR SLYVTMFLIIAPASIFCLFVAKELMNNFSYGLGLPVMISAVVFTAYDLSLLLLTSGRD PGIIPRNAHPPEPEGLDGNAEVGSNQTPPMRLPRVKDVVVNGITVKTKYCDTCMLYRP PRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFYMFVFSTTLLCLYVFGFCWVYIV KIRNSEQITIWKAMAKTPASIALLVYTFIAVWFVGGLSVFHLYLMSTNQTTYENFRYR YDQRANPYNRGVMENIKDIFFSAIPASKNNFRARVPVPQEQGLRPRPTNGFMSPNMGR AVGDIEMGRKPVAWDEPRMAADIGDLGAGLGNLLEDKDGRFRSASPDLSRDALAIGGL DDQGSSVMNPGRTSWGVEAGR</aaseq>

Gene Sequence

<dnaseqindica>2266..2706#1937..2170#1287..1583#899..1081#192..278#tctctttcttcctcctctcctcttcgtgtcttgccctccggcatcagcggcggcggagtggcggggttgcggcattgggagctgacgtggccgccggaggaggagcaaggcgcgcggcgccgccggccatgtggtgatctgggggggcttgatcccgccggagtggttcttgggctgagagtgcggcgcccatgaacggagcaagctccggcggcggcggcggcgccggtgccggcggggatgggccgttggtgtaccagcgctggaaagggaacaatgtgagcgccaatgtcccgcttcttctcttcttctcgacatctttgtctctctctcttcccctcgcttcttgggtgtatgtgtggatctgtgcgtttcttaggtggtgcactcgaattgaccttttttttttctttctagggaccaggattttgttgagttatgggagtgctcggattattttgttgagctctgtactgttgatagctacttattctgacgtttatctcgtgacttttgtacttgggaatgtggattgtaggacatgtatggtgtccttggtagtgagaaggacaagaaacatgagtacttagctttggttagtcttaactaaggtgttaaatgatttttagtttatgctagctagtgctttaataatccttccacatgatatgatgttacaatgtgaaaatgattttgttccttgtccattttgagtgaggtatgcatagacaaagttggcaatagtgcccagctagctggagtgatgccagttgtatgagatcttcaaattatttcctagctggagtgatgatagctgtatgagatcttcaaatcacttctgcgaatttaagaagtaggaaggtgtgattgcagcttatagcttttgtttctttttcaggtgtttgttcttcaggggaggtttatatttggacccgatgcaagatccttgtacgtcaccatgttcctcatcatcgcgccagcgtcaatcttttgtttgttcgttgccaaagaactgatgaataacttttcttatggtctgggattaccagtaatgatttcagcagttgtgttcacggcatatgtaagtatcactgtcaaccttttcaatttaccttcttcattggtttccacaaatgtgttgcaattagtatatgtgatttttgggataggttgtaattgaataggacatgtacataattgtctttgtttggtaaacagaaaagtgtataagtgtatatatgtatacattcagacttaccactttaggaatttctggcatatttcaggacttgagccttctacttctcacttctggtagggatccaggtataatacctcggaatgcacaccctccagaacctgaaggtttggatggcaatgcagaggttggatctaaccagactccaccaatgcgtttgccccgagtgaaggatgttgttgtcaatggaatcactgtgaagacaaaatactgtgatacctgcatgctgtaccggcctcctcgttgctcccattgctctatctgcaacaactgcgttgaacgttttgaccatcactgcccatgggttgggcaatgcataggacttgtaagttcatacatatgcaaatctgataaaattccctacttacataaactgtatgtactgatgtgttagccgtttcagtccatgaggagtttatctgcttattcatcctaatgaccttcctatggttattttcgtgtaatcatgcatgcatgcatcattatcttttattgtgctttccatttgctatttttattatcttgcttatgctgaaattatcctctgttagctatttcatattgtggtaacatagagcatctctgcagttccaaaattctcgctttctaagtctcctgtttttactatagattttgaaatgcttcaacatgcttataaatttgcatatgactgtgcagaggaattacaggttcttttatatgtttgtcttctcaacaactctgctctgcctctacgtctttgggttctgctgggtatacattgttaagatcagaaactctgagcagataacaatatggaaggctatggcaaagacccctgcttctattgctctgctagtctacacatttattgccgtttggtttgttggtggcctctctgtatttcacttgtatctcatgagcaccaaccaggtaaatactgtttcctgaaactgcaagcatatattcctagtcttgcatggtgtatgtattcagttaattgtttaccttttcctctgcttctgtagacaacatatgagaacttcaggtatcggtatgatcaacgggccaacccatacaacaggggagtcatggagaacattaaagatatattcttctctgcaattcctgcctccaagaacaacttccgcgccagagtcccagttccacaggagcaaggtctgaggcctcgcccaaccaatggtttcatgagtccaaacatggggagagccgtcggtgacattgagatgggtagaaagccggtggcatgggatgagccaaggatggcagccgatatcggcgatctgggagcaggcctgggcaacttgttggaggacaaggatggcaggtttcgcagtgcatctccagatctaagccgtgacgccctcgcaatcggaggcctggatgatcaaggatcctcagtgatgaacccagggcgtacaagctggggagttgaggcaggtcgatgatgacaatgtttagttgcccatgtatgcagttatagtggaagactcagggatttttagtgccggcttgttgctaatttggtgtttgggttgagatttgaggtcactgatgttcttaggcctatgaccttgggtggttgttttcacatttccatttctccttttaattttctgttcctccttattgtcccttgtatttcctgtatcagtggtttgaagcagttggttggttgtgaggtatccagattagttcagttctaattgtgtatgtatatagctagagcactgaacttaaagggattgttttacttggctttgatgaatgattgtgaacaagattgtattttgcagtggacaaacgccactcacttgagctgccattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0925300, RefSeq:Os01g0925300