Os01g0925800

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Revision as of 05:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0925800| Description = Similar to Ubiquitin conjugating enzyme| Version = NM_001051794.1 GI:115441958 GeneID:4327237| Length = 3000 bp| De...")
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Gene Name

Os01g0925800

Description

Similar to Ubiquitin conjugating enzyme

Version

NM_001051794.1 GI:115441958 GeneID:4327237

Length

3000 bp

Definition

Oryza sativa Japonica Group Os01g0925800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42390917..42393916

Sequence Coding Region

42391099..42391206,42391300..42391389,42392454..42392613,42393035..42393083,42393646..42393826

Expression

GEO Profiles:Os01g0925800

Genome Context

<gbrowseImage1> name=NC_008394:42390917..42393916 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42390917..42393916 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggacgtgtcgagggtgcagaaggagctgacggagtgcaaccgggacagggaggtctccggggtgtccatcgcgctccacgacggctccaccatctcccacctcaccggcaccatcgccgggccccaaggcacgccctacgagggcggcaccttcgtcatcgacatccgcctcccaggtggttacccctttgagcctcctaagatgcagtttatcaccaaagtatggcaccctaacattagcagccaaaacggagcaatctgcttggacatactgaaggaccaatggagcccagcccttacattgaagacggcactgctttccctccaagctctgctttctgcccctgcacctgatgatcctcaggatgctgtcgttgcacaacagtacttgcgtgactattccacattttctgctactgctcgctactggacggaggcctttgcaaagaattcctccaccggcatggaagaaaaggtgcagaagctggttgagatgggcttccctgaagacatggtgagaagtgttctgaagagtgtcaatggcgacgagaacatggctcttgagaagctctgctctggctga</cdnaseq>

Protein Sequence

<aaseq>MVDVSRVQKELTECNRDREVSGVSIALHDGSTISHLTGTIAGPQ GTPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISSQNGAICLDILKDQWSPALT LKTALLSLQALLSAPAPDDPQDAVVAQQYLRDYSTFSATARYWTEAFAKNSSTGMEEK VQKLVEMGFPEDMVRSVLKSVNGDENMALEKLCSG</aaseq>

Gene Sequence

<dnaseqindica>2711..2818#2528..2617#1304..1463#834..882#91..271#gcgttcgattcgattcgcatcggcgttgcttccaacgagagggagggagggaggagaggcgaatcgcggcgagcggcggcggcggcggcgatggtggacgtgtcgagggtgcagaaggagctgacggagtgcaaccgggacagggaggtctccggggtgtccatcgcgctccacgacggctccaccatctcccacctcaccggcaccatcgccgggccccaaggcacgccctacgagggcggcaccttcgtcatcgacatccgcctcccaggtactcaatccccacccctcttcctcgccgccgccggcggattccttccgttcgtgtttgggcggcggcgcgatcggcttttgcccccgtcgcatctccggagtagattgatgatgcgtagagggatttagtgtgggggaggtaggttagggcaagtcagggtgggatttggttccggattaggatttcaggatttggttcaatgcgtgttcgtcatagtgattatatttgtgtgccatggagaagtttgcatttgagcatgcggatttttgttgagatttccagcctgttaaatatatagctcaaggtgtattatttcatttccgtcgtttataatttcaaaactgagatactgcaagagcatttgcttatagggtctcaattgtgtttcaacttcctaccgtgacgatgagaacggagtttccatgtcgaatctttgtttacttggaattccgtggccttgttcgcatcaccatatggttttaaactgaaagccaagcaagagttgcgatgcattggaaagattgttggtgtcatctattgattgtgctctgattggcaggtggttacccctttgagcctcctaagatgcagtttatcaccaaagtatggtatgcaagctttccttctcccttttgttttttgcttgttgcttgtgttccttgcttatatgaatccttccttcgcccttttgtttactgcttgtgttccttgcttgtatgaagccatcactcccggagctaactgttgccaacaatttttattggttcacattagttgatctgttgttgtttggtcaataagcgataacagcaatggtacattgtgacacagtatctggaaatatatgccgttccagtgttgataaattctaagtgctgcaatgagttcactcttcatgtgctgcttatctgcccatgtccagaaaaaaattgtgacttatcagttgcgagtttgggattacttgaactttactggcgcttctttactgataactacaagtcttgatttctactccaatctatgttgaaggcaccctaacattagcagccaaaacggagcaatctgcttggacatactgaaggaccaatggagcccagcccttacattgaagacggcactgctttccctccaagctctgctttctgcccctgcacctgatgatcctcaggatgctgtcgttgcacaacaggtctggactacttgactatttagcttcatattttttagcataccaccttgttttgaactattatgcattaagagtaaatttacattgcctcttcttggaacattctatatccccacgaggcaagctcagttttgtgtatatatgcatgactacctcatattgcacctggtaaggtagcagcaaagagtgctacaacatattaaatatgagttatccaagtgatatgatggcatcaattacatgagatctgtgtttgtacctgtcacataattggtaaactttgtacatcttctgagctctgggttactgcatttatgtacctattccagtatctatgttcagttggtacctggtaaagtgatacacaattgttttcacttttcacctctatagctggcattttttttatagatacacgttttgtattggacacattgtgtgtgccgtgtagagttgatgctagatgagtagatgacaagcaaggtgcaaaggttgttctgatcacatgagctcatcaagcttttctgcactttgttctaaatatgctctgtgtcctgtgtgttactaatgatggtgtgcaaaaagatatgtataaaatgttgcattatgcgacctgattgtttattagtccggctagcctggactggactggagtatagggaagtccaataaaacagttctatctggtgtcctgtttgtgagtaaaacttgccaatattcaagcatagcaacatgactcagctagatgctttaattgtcattgtgccttactattagagagtcacttggctattcagtctaggcaggtccagagtctggactgtaccttatgtccttatctaggttacataatgagttcaagtgagtcaatccttgactaaagcaatgactaaagcaatgtagagtgtaagtatagatgggacaaattcactagaattttcatttatgattggagcaacaccagaaattcccaagttcaggacatgctcggaacttacaggtttaaggaatcagtgtcaagcttgtcttctgatcattatgtctgttttcatccatttttgcagtacttgcgtgactattccacattttctgctactgctcgctactggacggaggcctttgcaaagaattcctccaccggcatggaagaaaaggtattgttattgaggagtactcatatttattgttccagtgggtatacagaagttgtagataccgtagtaaaatactccattctgcaatcacaggtgcagaagctggttgagatgggcttccctgaagacatggtgagaagtgttctgaagagtgtcaatggcgacgagaacatggctcttgagaagctctgctctggctgaggccctataagccgatatgaactgtaaattgaatccccattcgttataagacaacagtgcttgctaatgctcctgttctgccatttaagtgtggctttatgacactcttctatataggggattggaccatgggacgttgggactgaactgaacctatcctaacttgacagagttcggtcatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0925800, RefSeq:Os01g0925800