Os01g0926200

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Revision as of 05:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0926200| Description = Similar to RING-H2 finger protein RHF1a (Fragment)| Version = NM_001051795.1 GI:115441960 GeneID:4327238| Length = 2...")
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Gene Name

Os01g0926200

Description

Similar to RING-H2 finger protein RHF1a (Fragment)

Version

NM_001051795.1 GI:115441960 GeneID:4327238

Length

2758 bp

Definition

Oryza sativa Japonica Group Os01g0926200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42402401..42405158

Sequence Coding Region

42403551..42403670,42404172..42404604,42404705..42404814,42404943..42404969

Expression

GEO Profiles:Os01g0926200

Genome Context

<gbrowseImage1> name=NC_008394:42402401..42405158 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42402401..42405158 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggattttgctgttgcctctgcactgacgatttcgaggagtacgctcatccaaataaccctatctataggcaaggtgtatgcctaaggaattttttccacaacttttttggcgggtatactgccacattccagaggctcgaatctagacctagcaacccagctcaaggggctgctccattggcatccactaatccaagtaccaatataactgacaattcattatccgaaacttatcaccttgtgtccagacctccaccgtatgatactgatcctagatatgcccgtgttcaaagagagggtttggtatctaggcgtgaaaagtctataaatctaacacaagaagagtcactggctcttaggcgaaatggcagcagctctggcattgaacatttagctgctcagaagaaatggagcagcactgaacctgagggtgaatataaagtccatcgctctgaatccaccaagagtttatccgcaaaatcgtataacagcagttttgcagttgtcacttcagaagatgaagatgtctgccctacttgtctagaagaatacactccagacaatccgaagattatagctaaatgctcccatcattatcatcttagttgtatctacgaatggatggaaagaagtgatacttgtccgatttgtgggaaggaaatggagttttgtgaaaccccatga</cdnaseq>

Protein Sequence

<aaseq>MGGFCCCLCTDDFEEYAHPNNPIYRQGVCLRNFFHNFFGGYTAT FQRLESRPSNPAQGAAPLASTNPSTNITDNSLSETYHLVSRPPPYDTDPRYARVQREG LVSRREKSINLTQEESLALRRNGSSSGIEHLAAQKKWSSTEPEGEYKVHRSESTKSLS AKSYNSSFAVVTSEDEDVCPTCLEEYTPDNPKIIAKCSHHYHLSCIYEWMERSDTCPI CGKEMEFCETP</aaseq>

Gene Sequence

<dnaseqindica>1151..1270#1772..2204#2305..2414#2543..2569#ccccacgacgccaccgagcccgggagggagaggccgacgcgacgcgacaagtccacacccacacacgcaccagcaccagcccaactcactcctcctcccccagattccgccgctccctccccctcgccgcgcggcgccgccgccgccgcggtggccaccagcaacgtcgagctcgccgtcgcccaggccggcggatgagagccaggtgagtggagctccacgaacccaccccacccttcccgctgcgggttcctgacctgatcgaccaaaggatcgctcgcggatgttgttggtgctgctgcggaatgcgatttgaggctgtagctgcggttctccgtccggcttttgcctgctggcctgtgtgcctgtgccgcgagagagcgcgagatgtggatcggctagtctctccatggtctcgtgctcctcgtcccatggtgttttgcttacttgcccgtgtgtgtgctgatgctgctgaaatgctcatctggaaatcggaatggtgcgggtgggaaatgtgggaggatgaggaggaaggagggaagtagcgcgactcatgcccatcctagaattgaccttcaggtagagatagataggaattgcgcacgaccctattacaggatgaaaaattccaaatccagagttaatcacttcaactaacaagagtattatgcaatgtttttttcctttgtcggccgttcacactcatgatctaccaacgatggtttagattctaaccttagcagctgaaatcaaccgaggaataggcttatgcgcgcatcaattggcacccctatatatttttctttcattcatgaacaaacgtccaatggtagtatgatacatcgatgaacaactgaacacatgctactagttatctttcttggcaactgcagacgtgcaaatggcaagtagaggactgctctgcaagcacatgttatgattttctactcctgttttcattagtccttcttataatacattagtgtagcggagcgtattatgcagttttgctgtttcagaattatggaacacccttttgcccatggaaacaatgcgacacatggttttatactaatgtatatgtctctctttgttaccttttagcatgttggatcatgctgatgctaatctctgctatttgcagtgaaccatgggaggattttgctgttgcctctgcactgacgatttcgaggagtacgctcatccaaataaccctatctataggcaaggtgtatgcctaaggaattttttccacaacttttttggcggggtaaagttatcctatgttgtttccagcattttgcattatcttcccaaccagttgattgaagtgccacacctagtagattcatcacttttggttacatgacgtgttagggaaagtgccaccttgctagcttatggttaggagtttttagtataagatgtcaccgccaatatcttctggttgaaaataattgcatcggcagtgatctaaagaagcaaaaaaattcttttgagagaccataagcttttgagctttttctctaccttgcataagttttgattgcatttgatcgcatatatatgttagattgacttgtgatttatggtctatggacattctttgggcatattcaaaattgtagtagagagaaatcatagatgcaatatgaaacatagtgtggctaattgctattttccatcgaacaatcagattgtgatatattcattttgatcactggatattttgttctaacaatattacttccattttcttttatctatgcagtatactgccacattccagaggctcgaatctagacctagcaacccagctcaaggggctgctccattggcatccactaatccaagtaccaatataactgacaattcattatccgaaacttatcaccttgtgtccagacctccaccgtatgatactgatcctagatatgcccgtgttcaaagagagggtttggtatctaggcgtgaaaagtctataaatctaacacaagaagagtcactggctcttaggcgaaatggcagcagctctggcattgaacatttagctgctcagaagaaatggagcagcactgaacctgagggtgaatataaagtccatcgctctgaatccaccaagagtttatccgcaaaatcgtataacagcagttttgcagttgtcacttcagaagatgaagatgtctgccctacttgtctagaaggttagagtgctatgtaatttagtctacacacacagagcaaatgcctttggtgtatgaaaatttctcatactgctccatttgcattgcattcatcatgcagaatacactccagacaatccgaagattatagctaaatgctcccatcattatcatcttagttgtatctacgaatggatggaaagaagtgatacttgtccgatttgtgggaaggtatgatattacaaacttccagtattcttagtttaagaagaccttttcatctgcgcaccggttaccagttcctaggaaatgttttttctacgcttgacaaatttcccttcaatgttatgccatttcaggaaatggagttttgtgaaaccccatgagagatttctcgctggttgtatcagtggaaggcaaaagatctacagtgtgatatgctggagagtctgtaaataatactagttgtccagatagatctcttttttgagatcaaattcttatgtgtactgaaatcatggcctacaaaaaagaaaatgcgctagaatttgatatatgaatatatttttgaatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0926200, RefSeq:Os01g0926200