Os01g0926300

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Revision as of 05:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0926300| Description = Similar to Transaldolase (EC 2.2.1.2)| Version = NM_001051796.1 GI:115441962 GeneID:4327239| Length = 2897 bp| Defi...")
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Gene Name

Os01g0926300

Description

Similar to Transaldolase (EC 2.2.1.2)

Version

NM_001051796.1 GI:115441962 GeneID:4327239

Length

2897 bp

Definition

Oryza sativa Japonica Group Os01g0926300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42405397..42408293

Sequence Coding Region

42405731..42405979,42406105..42406287,42406384..42406572,42406732..42407082,42407173..42407344
,42408071..42408225

Expression

GEO Profiles:Os01g0926300

Genome Context

<gbrowseImage1> name=NC_008394:42405397..42408293 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42405397..42408293 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccggcgccgtctccaagctcgccgccccgaggccggcggccgccgcgccgctcccgccggcgtccgtccgctccgcgttcctcgcctccgccccctccccgcgccgcttctccgtctccatcgccgccggccgcgccaggagccccatcattgcgatggcttctgccaaggaaggaaatggtgccccaacgaagaggacaacccttcatgatctctatgatctccagggtcagtccccgtggtacgacaacctctgccgtcctgtcaccgatttgctgccccttattggcagcggcgtccgtggagtcaccagcaacccatcaattttccagaaagccatctcgacttccaatgcatacgatgaccagttcaagcagcttatattagctggaaaggacgcagagagcgcttattgggaacttgtcatcaaggatatccaagatgcgtgcaaactttttgagcctatctacgaccagaccgatggggcagatgggtatgtttctgtggaggtctcccctaggctggcaaatgatacccagggaactgttgaagctgcaaaatggttgcacaaagtggtcgacaggcccaatgtctacataaagatccctgctaccgcagaatgtgttccttctatcaaggaagttattgctaatggcattagtgtcaacgtcacacttatcttctcgattgcaagatacgaggctgtgattgatgcttacattgatggacttgaggcctctggtttgagtgacctatcccgagtgaccagtgtagcgtccttctttgtcagccgagttgacacacttattgacaaaatgctcgagaagatcggaacacctgaggcacttgccctcagaggaaaggctgctgtagcacaggcaaagctagccaaccagctttaccagaagaaattctctggcccgaggtgggaggctttggtcaagaaaggtgccaagaagcagaggttgttgtgggcatctaccagtgtgaagaaccctgcatacccagacactctttacgtggatcctctcatcggacctgacaccgtttctaccatgcccgaccaagctctgctggcattcatcgaccacggcacagtttcgaggacaatcgacgcaaacgtttcggatgctgaaggtgtatacagtgccctggagaagctgggtatagattgggatgaggttggcaagcagctagagctggaaggtgtggactccttcaagaaggccttcgacagcctgcttgggagcttggaggagaagggcaattccctcaagaagaccgtgagcctgtag</cdnaseq>

Protein Sequence

<aaseq>MTGAVSKLAAPRPAAAAPLPPASVRSAFLASAPSPRRFSVSIAA GRARSPIIAMASAKEGNGAPTKRTTLHDLYDLQGQSPWYDNLCRPVTDLLPLIGSGVR GVTSNPSIFQKAISTSNAYDDQFKQLILAGKDAESAYWELVIKDIQDACKLFEPIYDQ TDGADGYVSVEVSPRLANDTQGTVEAAKWLHKVVDRPNVYIKIPATAECVPSIKEVIA NGISVNVTLIFSIARYEAVIDAYIDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLE KIGTPEALALRGKAAVAQAKLANQLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNP AYPDTLYVDPLIGPDTVSTMPDQALLAFIDHGTVSRTIDANVSDAEGVYSALEKLGID WDEVGKQLELEGVDSFKKAFDSLLGSLEEKGNSLKKTVSL</aaseq>

Gene Sequence

<dnaseqindica>2315..2563#2007..2189#1722..1910#1212..1562#950..1121#69..223#agctcaaaaccccgcaacaacccaaccctcgtgaccaacccatctccccaccaaccccggccgccgccatgaccggcgccgtctccaagctcgccgccccgaggccggcggccgccgcgccgctcccgccggcgtccgtccgctccgcgttcctcgcctccgccccctccccgcgccgcttctccgtctccatcgccgccggccgcgccaggagccccatcatgtgagtcacccgcgaatccgcgatcgccctcctcccttttttgcttcccttttgccctagttccatcgtgattgctttgctattcgagtgctcgattgctcgactcggcgaggtttggttgcggtagagctccgctaatctgtgctatgggagcgaggaggattggattggttggatcgcgtgcctgctctgccgcgtagatgcgtagccagccgccggatccgcggtcaaaacgacgccgtctgtgcagggggcatggacgcgtgtgcggctgtccgactgattagtgggtcgtcgggatcgtgcgttttcccgaaccatctcgctagctcgagcagatagggatggcatgcgtcgccgtgcgggatccgtcgctggatgatggcgaagcgctcctataatgattatctgggttttagcgggaaggttaggcaggaggttgcgacttagcaacggctaactgggaaagcaaaagggggcaaccttttcagtttggcgtctgaggaattcggctgcgtgcgtgccaccctactctgcaatcagcgtgaaaaataaaattactcgttttccctttcgtttcaggggtaacatgggattcatataaggatccatagtgttcacttgcttacttgcgtgtgcatcttcgaattctgtggaattgtgcagagtttttagttgtaactcacatgtctcgtttctcatactcatgaattcgacaattttcagtgcgatggcttctgccaaggaaggaaatggtgccccaacgaagaggacaacccttcatgatctctatgatctccagggtcagtccccgtggtacgacaacctctgccgtcctgtcaccgatttgctgccccttattggcagcggcgtccgtggagtcaccagcaacccatcagtacgctacactacttatttcttttgctctcttgcaccttgttctgaatctgcaatcctcattgctgactgtgtccctatggcaatgcagattttccagaaagccatctcgacttccaatgcatacgatgaccagttcaagcagcttatattagctggaaaggacgcagagagcgcttattgggaacttgtcatcaaggatatccaagatgcgtgcaaactttttgagcctatctacgaccagaccgatggggcagatgggtatgtttctgtggaggtctcccctaggctggcaaatgatacccagggaactgttgaagctgcaaaatggttgcacaaagtggtcgacaggcccaatgtctacataaagatccctgctaccgcagaatgtgttccttctatcaaggaagttattgctaatggcattagtgtcaacgtcacagtaagtcctgattcctagtatttccattgttttttttccaccttagtcattatcagctgtgctgtgtttatttgactgctcaagacatacaaccgctgagcttgccataacccttgatgctaagcttgttgataacaaattcattgcttgtcgctgcagcttatcttctcgattgcaagatacgaggctgtgattgatgcttacattgatggacttgaggcctctggtttgagtgacctatcccgagtgaccagtgtagcgtccttctttgtcagccgagttgacacacttattgacaaaatgctcgagaagatcggaacacctgaggcacttgccctcagaggaaaggtacgcacaatcaaaattacatgcctcctaagtcctagcattaggaatttccaaactagcagttctaatctgcattttggtcactctgtattacaggctgctgtagcacaggcaaagctagccaaccagctttaccagaagaaattctctggcccgaggtgggaggctttggtcaagaaaggtgccaagaagcagaggttgttgtgggcatctaccagtgtgaagaaccctgcatacccagacactctttacgtggatcctctcatcggacctgacaccgtgagtttccacagcaaatttacttcatcttatcatctagattgttggaatagctgaatagagctcgacattccatcatacacatgggcataatttcgaagcaaatgctaactgtgcgctttcaggtttctaccatgcccgaccaagctctgctggcattcatcgaccacggcacagtttcgaggacaatcgacgcaaacgtttcggatgctgaaggtgtatacagtgccctggagaagctgggtatagattgggatgaggttggcaagcagctagagctggaaggtgtggactccttcaagaaggccttcgacagcctgcttgggagcttggaggagaagggcaattccctcaagaagaccgtgagcctgtaggtgcaaagatagctgaaatgttttgaacgctggcaatggcaagtgaacgattactaaataaatgctctaccttgctggctctctccctctctcaaactctcttgtgatgtgctgctctcgaatttctgggtcagcttttgtattctaggcgctcttggctgctatttgtgtaactgaggttgcgaactgctatgcattttctgataaattgttgggcaagttgatttcatgtgtacatctagactgtaattttttttctggtcaacattgcgagactgaattaatgatgcatctcggagaggttaaaatgacatgtaaaatactgtaataaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0926300, RefSeq:Os01g0926300