Os01g0926600

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Revision as of 05:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0926600| Description = Similar to Pectin-glucuronyltransferase| Version = NM_001051798.1 GI:115441966 GeneID:4327242| Length = 3032 bp| De...")
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Gene Name

Os01g0926600

Description

Similar to Pectin-glucuronyltransferase

Version

NM_001051798.1 GI:115441966 GeneID:4327242

Length

3032 bp

Definition

Oryza sativa Japonica Group Os01g0926600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42421282..42424313

Sequence Coding Region

42421633..42422146,42422249..42422490,42422666..42423054,42424074..42424176

Expression

GEO Profiles:Os01g0926600

Genome Context

<gbrowseImage1> name=NC_008394:42421282..42424313 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42421282..42424313 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgcggctgtcttcggcggccgtggcgctcgcgctgcttctggccgccaccgccttggaggacgttgccaggggccaggacaccgagaggatcgaagggagtgcgggtgatgtgctggaagatgaccctgtcgggaggcttaaggtgtatgtctacgagttgcccactaaatacaacaagaagatggtggcaaaagattccagatgcctcagccacatgtttgctgcagagattttcatgcatcgattcctcttgtcaagtgcgatccggactttaaatccggaggaagctgattggttctatactccagtatacacgacgtgcgatcttactccatggggtcatcccttgcccttcaagtctccaaggattatgagaagtgcaattcagttcatttcctcgcattggccctattggaacaggacagatggggcagaccatttctttgttgtgccacatgatttcggagcatgcttccattatcaggaagagaaggccattgagcggggaatcctgccattgcttcgccgtgcgacgctggtccagacttttgggcagaaggatcatgtctgcctcaaggaagggtccatcacaatcccaccatatgctcctcctcagaagatgaaaactcaccttgttcccccagagacacctcgatcaatctttgtctatttccgtggtttattctatgataccgcaaatgatcctgagggtggttactatgcaagaggtgcccgtgcatcggtgtgggagaacttcaagaacaatcctctttttgacatctccacagaccacccaccaacctactacgaggacatgcagcgttccatcttctgcttgtgccctctaggctgggctccgtggagcccccggttggttgaagccgttgtgttcggctgcattccagtgatcattgcagacgacattgtcctaccttttgcggacgcgatcccgtgggatgagatcggtgtatttgtggcggaggacgacgtcccaaagctggacaccatcctgacatcgataccaatggatgtgatcctgcggaagcagaggctgctagcgaacccgtcgatgaagcaggccatgctgttcccgcagcccgcccagccaggtgacgccttccaccagatactcaacgggctgggacggaagcttccacacccgaagagcgtgtacctggacccggggcagaaggtgctgaactggacccagggcccggtgggtgacctgaagccatggtag</cdnaseq>

Protein Sequence

<aaseq>MAMRLSSAAVALALLLAATALEDVARGQDTERIEGSAGDVLEDD PVGRLKVYVYELPTKYNKKMVAKDSRCLSHMFAAEIFMHRFLLSSAIRTLNPEEADWF YTPVYTTCDLTPWGHPLPFKSPRIMRSAIQFISSHWPYWNRTDGADHFFVVPHDFGAC FHYQEEKAIERGILPLLRRATLVQTFGQKDHVCLKEGSITIPPYAPPQKMKTHLVPPE TPRSIFVYFRGLFYDTANDPEGGYYARGARASVWENFKNNPLFDISTDHPPTYYEDMQ RSIFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVAEDDVP KLDTILTSIPMDVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQILNGLGRKLPHPKS VYLDPGQKVLNWTQGPVGDLKPW</aaseq>

Gene Sequence

<dnaseqindica>2168..2681#1824..2065#1260..1648#138..240#gctcgcctccctcctctcccctccccgtgttcctctccttcctcctcctcctcctcgattggccagccgcatccagcatccttcttgggggtttcgtcgaggtcggtggttggaagggaggagaggtggggggagccatggcgatgcggctgtcttcggcggccgtggcgctcgcgctgcttctggccgccaccgccttggaggacgttgccaggggccaggacaccgagaggatcgaaggtacgcaccgcacgcgctcgcgagcggttcaagtagcgatttctttttctttttcttcttttttttggcgatggttgattgcttgctccgttgctcgatgcgtgcttttcgcaatgtttgtgtcggtgcatttgatccgtggttgctgctgcattctgatggctggaatctgaccaatctgttgtggggattgagtgaagcgagcagtttaatttagggcgtatcttgcagataatcacttgcctcccgcgaccttggggacaaggggatctgctgttgcttggatatcaactgttaatcgtagcactatttgttctaggtccaatttccagttaatataaacttccccggggaccgggagagtctgctactagctacttacttcatgcccaacacgcagccacctctgctagtagtagattcatgtgttatccaacatctttggtttagcctctacgcgatcgttccgcgttccatgttccgcggcctcgattcagttgccatggaataatttatgctcatgtgtgagtgtgatgtgtggttgagtgtagctcaagctcgattctttctcaattactccggtcaaaactcgatgcataatgaggtgaacagtaagcatgtgaatcaatgtagtattagttgatatataagcaagtggctgaaattactgaactataccgacgactatcatactcggtcaatctactggatctgatgagtttctcaaatagaattgacatgtgctttcgcattcttgcattccttttttatgtcatttttttaacgattttttgagtcatttttatgcaataataacatactagtagtactaaaaaaactctggttggcaagctactcctaagtcttatccactccataactaattgccgcagtttgacttatgatttgcttaccaaaaagagaaacttatgggaagctgttaggcctgtcaaattatggtggctgctaggacactacataattctcactttttcattgtacatatgaccatatcttagggagtgcgggtgatgtgctggaagatgaccctgtcgggaggcttaaggtgtatgtctacgagttgcccactaaatacaacaagaagatggtggcaaaagattccagatgcctcagccacatgtttgctgcagagattttcatgcatcgattcctcttgtcaagtgcgatccggactttaaatccggaggaagctgattggttctatactccagtatacacgacgtgcgatcttactccatggggtcatcccttgcccttcaagtctccaaggattatgagaagtgcaattcagttcatttcctcgcattggccctattggaacaggacagatggggcagaccatttctttgttgtgccacatgatttcggagcatgcttccattatcaggtaaatcaaggaatcattaaccttgaactattgtatatcaaatcatggaaacatacgatgagcctcatctacatactcaatacaacgaaatcattcagctccaatgtaccaattgttacccttttacatgttcaaccatgggatcttatttgcatttggtttttccatgattcaggaagagaaggccattgagcggggaatcctgccattgcttcgccgtgcgacgctggtccagacttttgggcagaaggatcatgtctgcctcaaggaagggtccatcacaatcccaccatatgctcctcctcagaagatgaaaactcaccttgttcccccagagacacctcgatcaatctttgtctatttccgtggtttattctatgataccgcaaatgatcctgagggtggttactatgcaaggtgagcaccaagaacatgcaatcactcgatgcttcctcataagcattgttgatgaattattgtaacccaaaagtcttgatgaacctgctttatgcaatgcagaggtgcccgtgcatcggtgtgggagaacttcaagaacaatcctctttttgacatctccacagaccacccaccaacctactacgaggacatgcagcgttccatcttctgcttgtgccctctaggctgggctccgtggagcccccggttggttgaagccgttgtgttcggctgcattccagtgatcattgcagacgacattgtcctaccttttgcggacgcgatcccgtgggatgagatcggtgtatttgtggcggaggacgacgtcccaaagctggacaccatcctgacatcgataccaatggatgtgatcctgcggaagcagaggctgctagcgaacccgtcgatgaagcaggccatgctgttcccgcagcccgcccagccaggtgacgccttccaccagatactcaacgggctgggacggaagcttccacacccgaagagcgtgtacctggacccggggcagaaggtgctgaactggacccagggcccggtgggtgacctgaagccatggtaggtcagatgcacccacccaccatacatagttgctgctgtcctcgcttgtttgtgcgcacagcacattcttcagaagatcagatgagagactgatgatgatcagtaaaagaaaaccaagccaatccgttaaatgtaaagcctcctttcttccttcctcctactacctttgcttctttttgagacgatgtgccctgcctgccctgcgcccttgccagtgacattcccttggtttttatgttgttgttgctgtagtagtattagacaactggtacctataggcgatgaaggtgttgtatcatatacttaagtgctacctccgttttttaatagatgacgccgttgactttttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0926600, RefSeq:Os01g0926600