Os01g0928600

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Revision as of 05:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0928600| Description = Similar to Serine palmitoyltransferase (Fragment)| Version = NM_001051812.2 GI:297598235 GeneID:4326964| Length = 45...")
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Gene Name

Os01g0928600

Description

Similar to Serine palmitoyltransferase (Fragment)

Version

NM_001051812.2 GI:297598235 GeneID:4326964

Length

4580 bp

Definition

Oryza sativa Japonica Group Os01g0928600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42554179..42558758

Sequence Coding Region

42554812..42555159

Expression

GEO Profiles:Os01g0928600

Genome Context

<gbrowseImage1> name=NC_008394:42554179..42558758 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42554179..42558758 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acaggggccaagaagattgctcagattagagataacagcaatttcttccgttcagagcttcagaaaatgggctttgaggttcttggagataatgactcacctgtcatgcctttcatggtctacaatcctgctaaaatgcctgcattctcaagagagtgcctgaagcaaaatgtgagtttttttcaagtgcaccacaaatctattaaaaacctgataaaacaatcttgtccgtttagtaaatctctaatgcaaatttgtctcaaaatagtccaaagttttgtactatttgagttacaccctgtaactcttttttgtgttattaaaaaaaagttttgcagttttaactaa</cdnaseq>

Protein Sequence

<aaseq>TGAKKIAQIRDNSNFFRSELQKMGFEVLGDNDSPVMPFMVYNPA KMPAFSRECLKQNVSFFQVHHKSIKNLIKQSCPFSKSLMQICLKIVQSFVLFELHPVT LFCVIKKKFCSFN</aaseq>

Gene Sequence

<dnaseqindica>3600..3947#tcatctcaccatccatcgatcacacatcagctagctcgatcacaaacaccgacgcttccgccgcattccggccaccggagtcgaggaagaagagagagagaggtagctgatcgagctaagcaatggtgatcaaggtgccgtacgtgacggcggcgacgacgctgttcagcttcggcctcatcttcggcttcggccacctccgcgactccttccgcgcccttctccgcctcctcttctcctccgccgccgccgccgactcgccggccggctgcaactccaaagttaatactccctctatccctaattataaggcctatatctttttacacggtctttaataatatattttgatcagtattttattttattctataatcccaataaatgtaaaattaaaatcacatgaaagtatttcaaaatctgaatctagtgatataacatgtataatatttagtatagatatagttagtatgattatcagttaaaaactaccgagtttaatttttcttaaaaatggacgccctaaattatttaggacgggtagtataattacctaaatgcctgcaggttagcttaattgatactccctagtactaagtaattagcttcattaatttgtctctcgcattattgattatcctacttatgtgctgagctgatctttttcgtctcgcatcacagggttacgcgccgatttgcgttgggaaggaggatttctacatccgccgcttcttccgccgcgtccaggtgagctcaccttcttctctctttctgtccaaccatgcaattttttttctaatattaatgcgcaagagccttacatgtcaatatgttatattagaaaaaaaaaagaaaattttatacaatcgtaccatgctgtaacggttagaagaggcatacacaaagaaaaaaaaccgtaaatattaaaaaatgacctaatatcaaataaataaaaagggtaaaacgttttaaatccaggctagctaacccactatcttatgaaactagccagaaaaccactagaagtttctcatatacacaaagagaaaatgacatcaacagctagcagataggcatgactgcatgagccctgagctcccaccattcactcatccatgcgtataattagtagaactaatgtgctatatgtattaatcaattattacttacttagtttacttcctgtgtttaaagttgcttttatttttgctcggccctaagttaaacgtatatactagcatctttgattattagtttatagagaaaccgtataacttaaaaacatgttaatgatatattatgaagatataattaaaaaaacataaatgttatggtgttaaattatataaatatttaggaattaatagtttgatttacaataaagttaaaacgataaataatttgaaacgaattatgtacttactaacatgcatggtgaattattaatctgtttaattctcgatctgttcttgtgtttttctgaacgaattactgttctcgctgcaggactgtttcgggcgaccgatagccagcaagcctgatgcgtggttcgatgtggttgagcgctactcgactgacagcaacaagacactgcagtatgaatacatttcttctcctgaatcccgatttcatatctgattagcatgcatgatatcctgatccaacaattaacgctgcacctctgaataactctgaatttctgatcgatgcaaatgcatatgtctacatatatatgcagctgcaccacgaaaacatccaagtgcctgaacctggcatccttcaactacctaggtttcgctgctgctgatgagtactgcacacctcgtgtcatcgagtctctgaagaaatactctgctagtacctgcagttcccgagtcgatggaggtacatttatatagcacttaattggtatagtttaactctgattaatgatctaagtatactgctagctagaattaagctttcgtttatgtttatgatctcaaggcaacactcagctgcacatagaactcgaagagctggttgcaagattcgtcaggaagccttcggctattctgcttgccatgggttatgccaccaactctgccatcattcctgccttgattgggaaggtaattagttttgttgtaaatattttttttctagataaagattttgttgtaaatatatatggagtctgtatttgtttatttctgttttttgtttcgtgcatcctggagctgattaatgtactgtaattatttcagggtggactgataatcagtgattcactgaaccataactctatagtcagtggagctagagcttcaggagctacgattcgggtgttcgaacacaacagtaagctcacaaacaactgtcaattgcatttgcaagtaattagttattagctgaacaattcatctcaccaaatttcattaatttcttttgcagatcctgctcacctggaaaaactactgagagagcagatttcaggtggacagcctagaacacacagggcatggaagaagatcctggtgattgttgaggggatatatagcatggaaggggagctatgcaaactccctgagatcatatctgtctgcaagaagtacaaggttaattggagaaattaattccacttactactaaatttctgaattcttcttatgtttcttagtttcattctgaaccatactagtaagaaaagaacagtagtaccatctttcagaaaaagagaaaaggggaaacttttgaggcattataatgctctttgcgggtagaagaacaatctagaccatttttttctaatccaatgaatcatatttatttatactacaacgtcaactactggtagtagattttttttttgtaccggtagtagagctcataaatcaaaatctaagatcatttctatcgacgataaatactaaagagcatcgtgaaggtacccaaaacttttacggtggtctcaactggtagtattttactgccattatagtactaccgatagatatcaacaaaagaaaaaaagaactcttcttctgggtatgttattactggatttttttttctgaaacttttaagagttgttcaaactggtagggatgtactatatggtattgactagtaaaacatatgaataggtttacacatacatggacgaggcacacagtattggagctgttgggaaaacaggaagaggtgtgtgtgagctactaggagtggatccggctgatgttgacatcatgatgggcacactctcaaagtcatttggatcgagtggaggttacattgcagcatcaaaagtatgaattaattaagcagattcacttaccagttcttgtctgagaagacaaaagagttgataataaaactgatccttggattattttttcatgtttaccaggagattattcagcatctcaagcttacatgtccttcacatatctatggcacatccatgtcacctcctgcagtccagcaggtcatctctgcaatgaaggttattcttggggaggatggaactgacagaggtatatatctgcttccaaaatttgaacaaattgactcataatttctcctgttttgaggaaattcatgatgcaatgttgttgtaaacaggggccaagaagattgctcagattagagataacagcaatttcttccgttcagagcttcagaaaatgggctttgaggttcttggagataatgactcacctgtcatgcctttcatggtctacaatcctgctaaaatgcctgcattctcaagagagtgcctgaagcaaaatgtgagtttttttcaagtgcaccacaaatctattaaaaacctgataaaacaatcttgtccgtttagtaaatctctaatgcaaatttgtctcaaaatagtccaaagttttgtactatttgagttacaccctgtaactcttttttgtgttattaaaaaaaagttttgcagttttaactaatgtggcatgttccatacttttaggttgctgttgttccggttggatttcctgctacaccactacttcttggcagaattaggatatgcatttctgcttctcactcaagggaagatcttatcaaaggattggaggtaaagcacataattaactgaatctatggaactaactgaattcatttttggtttgtgccgttcattcatatctgagtatgcattactttccatgaatatttttcaggttatcagcaacgttggtgatcttgttggaatcaagtacttaccagttgagcaagaggagactacatctgttgagaaaccaaagaagctttagtgaacaatctgcgtctcttgtgctagatcaagctcaattctttctgttacacaccgatatacattttagaacttccccctgttaccactcctaagtctgagaataagtatgtctgaaatcgtgtaagttcccttccaaaatgtaataatggttgcgtttatcatgtgtaaaaaataacatctttactcatacctgatgagttcagtttctgtgaccaactgatatactgagcgtcagtaacatgcaaaagcagatgactgaatctgaaatctctcaccctatcctatgtatggttaatagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0928600, RefSeq:Os01g0928600