Os01g0928700

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Revision as of 05:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0928700| Description = Similar to Serine palmitoyltransferase| Version = NM_001051813.1 GI:115441996 GeneID:4326965| Length = 4445 bp| Def...")
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Gene Name

Os01g0928700

Description

Similar to Serine palmitoyltransferase

Version

NM_001051813.1 GI:115441996 GeneID:4326965

Length

4445 bp

Definition

Oryza sativa Japonica Group Os01g0928700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42562017..42566461

Sequence Coding Region

42562017..42562112,42562216..42562323,42562460..42562626,42563158..42563284,42563373..42563534
,42563723..42563886,42564049..42564142,42564224..42564348,42564792..42564937
,42565284..42565372,42565941..42566006,42566312..42566461

Expression

GEO Profiles:Os01g0928700

Genome Context

<gbrowseImage1> name=NC_008394:42562017..42566461 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42562017..42566461 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgagggtgccgttcgtgaccgcggtcaccacggtgttcagctacggcgtcatcttcggcttcggccacctccgcgattggttccgcgccctcctccgctccctcttctccggccactcgccggcggcagccggtaccaacctcaagggttacgcgccaatttgcggaggacaggaggatttctattaccgacgattcgttcgtcgcgttcaggactgcttttggcgaccaatagccagcaagccggacgcatggttcgatgtggttgagcgctactcaaatgacagcaacaagacactccaccgtaccacaaaaacatccaggtgccttaacttaggttcctacaattaccttggctttgctgcggcagatgaatactgcactcctcgtgttattgagtcactaaagaaatactctgctagtacttgcagtgtccgagtcgatggaggcaacactaagctgcatgtggaacttgaagaactggttgcaagatttgttggcaagcctgcagctattctcttcggcatgggttatgtgacgaactctgcgatcattcctgccttgattgggaagggaggcctcataatcagtgattcactgaaccataattctatagtgaatggagcaaggggttcaggagctagtgttcaagttttccaacataacaatcctgcacacttggaagaggtattgagagagcagattgcaggaggccagcctcgcacacaccggcgatggaagaagattattgtgattgttgagggaatatatagcatggaaggggagctatgcaaactccctgagattgtagctgtctgcaagaaatataaggcttacacatatttagatgaggcacacagcattggggctgttggtaagacagggagaggtgtttgtgaattacttggagtggacccagcggatgttgatattatgatgggaacatttactaaatcatttggatcttgtggaggttacattgcagcatcaaaagagattattgatcatctgaagcacatatgccctgcccatatctatgcaacatccatgtcacctcccgctgtccagcaggtcatctctgcaatagaagtaatccttggtgaagatggatctgacagaggagccaagaagcttgctcagattcgggagaacagcaatttcttccgttcagaacttgagaaaatgggttttgaagttcttggagacaacgactcgcctgtcatgcctatcatgctttacaatcctgctaaaatgcctgcattctcaagagagtgcctgaggcaaaaggttgccattgttactgtttcatttccggcaacgccactgctacttgccagagctaggatatgcatatcagcttcccactctagggaagatcttattaaaggattggaggttatcagcaaagttggtgacctcgtgggaatcaaatatttaccagtggagcatgaaaagactacatctgctgagaaactgaagaagattcagtga</cdnaseq>

Protein Sequence

<aaseq>MVRVPFVTAVTTVFSYGVIFGFGHLRDWFRALLRSLFSGHSPAA AGTNLKGYAPICGGQEDFYYRRFVRRVQDCFWRPIASKPDAWFDVVERYSNDSNKTLH RTTKTSRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELE ELVARFVGKPAAILFGMGYVTNSAIIPALIGKGGLIISDSLNHNSIVNGARGSGASVQ VFQHNNPAHLEEVLREQIAGGQPRTHRRWKKIIVIVEGIYSMEGELCKLPEIVAVCKK YKAYTYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEI IDHLKHICPAHIYATSMSPPAVQQVISAIEVILGEDGSDRGAKKLAQIRENSNFFRSE LEKMGFEVLGDNDSPVMPIMLYNPAKMPAFSRECLRQKVAIVTVSFPATPLLLARARI CISASHSREDLIKGLEVISKVGDLVGIKYLPVEHEKTTSAEKLKKIQ</aaseq>

Gene Sequence

<dnaseqindica>4350..4445#4139..4246#3836..4002#3178..3304#2928..3089#2576..2739#2320..2413#2114..2238#1525..1670#1090..1178#456..521#1..150#atggtgagggtgccgttcgtgaccgcggtcaccacggtgttcagctacggcgtcatcttcggcttcggccacctccgcgattggttccgcgccctcctccgctccctcttctccggccactcgccggcggcagccggtaccaacctcaaggttggcttactacgtgtgtaccccctccgtttcatattatataattaagtcgtttaatttttttctatattattaaaatatattcaatgttaaatttaatgaaactaatttggtattataaatattgctaactttttttataaatttaattagtaaaaaaaaactttaataaaaaaaagttaaacgacttataatatgaaacggatcgagggagtagcttatcatcatcatcatcatcatcattactactactacataggttgtcatgctaaatgtatagactcgatcaatctatatgtatgtagggttacgcgccaatttgcggaggacaggaggatttctattaccgacgattcgttcgtcgcgttcaggtaagctatagtaacctacatttcctatatttctaaagatgattaataaaaccctatatttctgaagaggattaataaaagtgtacatgtgcacacagatatattaatttaaactttaaattttaatttgatgtttttactttttttttttctttttaagtcggtaaaaacaaacatatataaaaattttacatatgaattagtttttaatcagtaataagtactccctccatttcgaaatgtttgacaccgttaattttttagcacatgtttgaccgttcgtcttattcaaaaacttttgtaaaatatgtaaaattatatgcctacataaaaatatatttagcaatgaatcaaatgataggaaaagatgtaataattatttaaaatttttgaataagacaaacggtcaaacatgtgctaaaaagttaacggtgtcaaacattttgaaacggaggaagtttacagattataattagctatttagacttttaaattattagatgttttattgagatttgtgttttaattggcttatgtttatcaactatatatatgttgtcacatgcaggactgcttttggcgaccaatagccagcaagccggacgcatggttcgatgtggttgagcgctactcaaatgacagcaacaagacactccagtacgtattatactcctctctcgtataaaatatcacttttgctacaaatctaaagttgttttttataagacaaagagatatgtctttgtcacactatatatattttatacctaattgttaaaaactatatgatttatgttaactcgatatttcattttatttttaactctaaaacttattggttatatgcatgtcggcagaggacatagatgtaaaccatttttatcattttaagaaaattctgcacctaataagcataagcaaatgctgcggatatatatcttaattatattagaggatgcatgctagaaattaatctgacccaatgcttctctgatatatgcagccgtaccacaaaaacatccaggtgccttaacttaggttcctacaattaccttggctttgctgcggcagatgaatactgcactcctcgtgttattgagtcactaaagaaatactctgctagtacttgcagtgtccgagtcgatggaggtatgtctaatgtctctactttgttgccattggtgtccaagtagcatgtaaatatggtccatggaaggagttgaggatttttctcatcactctgtacctttttttagtgccaacaacgcaattggttatgtttgtcaatggcgaccagagatgtactcctgtatttaaaatatatggcactataaattttatttgatcaaattactaaaattttgatcactctcgaaatcttgaaatatttggtttcaaaacataaaaaattatatggagattttttttacaatattataattttcctagatattatcgttacgtactaatagaaaaatagcgaccatagttacgcaccaaagatcaaaagaaggtaacaacgctataaatttaaatcgtaattattgtaaaagcaagagcttactgcagctaatttatttcaatgatgttaggcaacactaagctgcatgtggaacttgaagaactggttgcaagatttgttggcaagcctgcagctattctcttcggcatgggttatgtgacgaactctgcgatcattcctgccttgattgggaaggtcagtggcagagaaactgccatgttttcataattcctgttctttctgtacattatggagctaatatattattgatttcagggaggcctcataatcagtgattcactgaaccataattctatagtgaatggagcaaggggttcaggagctagtgttcaagttttccaacataacagtaagcgagctcactgataattgctaattactcccctgtttttgaacatacggcattgttaatttttaaacatgatgcctgagaatgtttgcaactttgcaaatggcgtgtgccgaacaatatggatcacagaacttaattcttcccttcaatttcttgtagatcctgcacacttggaagaggtattgagagagcagattgcaggaggccagcctcgcacacaccggcgatggaagaagattattgtgattgttgagggaatatatagcatggaaggggagctatgcaaactccctgagattgtagctgtctgcaagaaatataaggttcaagaatttcttacactgacttcttgtatatgttctttcttcagatcattaagcatgtaaatctttttttaatcaaaagcttgtaaatctgtttactgtcatatacattacttcaacttttatcagctattaaaatcgataaatatttactgagttttgactattgtacttaaatttctggacaggcttacacatatttagatgaggcacacagcattggggctgttggtaagacagggagaggtgtttgtgaattacttggagtggacccagcggatgttgatattatgatgggaacatttactaaatcatttggatcttgtggaggttacattgcagcatcaaaagtatgaagcatattaacgtactatttagatgaacaactttagtctgtagattttaaatctgacccatggattactctatgtttatcaggagattattgatcatctgaagcacatatgccctgcccatatctatgcaacatccatgtcacctcccgctgtccagcaggtcatctctgcaatagaagtaatccttggtgaagatggatctgacagaggtataccagaatttgttgatttcttatttcttctcactctctttttgatttagattattgagagaattattgccatggattatctaattgactatagggacaaattataaatactttgagaaattgacttaacaaatactacttccgttttaggttataagacgttttgactttggtaaaagtcaaactgcttcaagtttgactaagtttgtagaaaaaaataataacgttttcaacccaaaacaaatttattatgaaaatatattcaattatttatttaatgaaactaatttggtattataaatattattatatttatctataaacttagtcaaactcttgactttgactaaagtcaaaacgtcttataacctgaaacggatggagaagcttaaaacaagtgggctaagtggtgcagtagaagtttttgagacaacatattttttaaagtacagaacaaatcatccgtttcaatgttcctaatactttagataatgaggagattcctaatgtaattattgttataaacaggagccaagaagcttgctcagattcgggagaacagcaatttcttccgttcagaacttgagaaaatgggttttgaagttcttggagacaacgactcgcctgtcatgcctatcatgctttacaatcctgctaaaatgcctgcattctcaagagagtgcctgaggcaaaaggttagttttattttcttcaataactaataattcattgttttagttttgaattcggtaatacacccagaatctcttctattaattgcaaattttttttctgattgaccaatgtgacaacatattttcataattctaggttgccattgttactgtttcatttccggcaacgccactgctacttgccagagctaggatatgcatatcagcttcccactctagggaagatcttattaaaggattggaggtaaattggtcaattttactggtgttatggcttgttgtgacaagtttgatttagttgcaaattaaccacatgcagttgctaattttcatgttaatttggttaggttatcagcaaagttggtgacctcgtgggaatcaaatatttaccagtggagcatgaaaagactacatctgctgagaaactgaagaagattcagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0928700, RefSeq:Os01g0928700