Os01g0930300

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Revision as of 05:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0930300| Description = Polynucleotidyl transferase, Ribonuclease H fold domain containing protein| Version = NM_001051822.1 GI:115442014 Gen...")
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Gene Name

Os01g0930300

Description

Polynucleotidyl transferase, Ribonuclease H fold domain containing protein

Version

NM_001051822.1 GI:115442014 GeneID:4326944

Length

7957 bp

Definition

Oryza sativa Japonica Group Os01g0930300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42617837..42625793

Sequence Coding Region

42617857..42618825

Expression

GEO Profiles:Os01g0930300

Genome Context

<gbrowseImage1> name=NC_008394:42617837..42625793 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42617837..42625793 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggagagctgtcactaacagtctggcaactatggtgaataagaagaaaaggaatctagagcaaaactccttgtgtaccatctgtggaacagaggaagaggatgttgctcacgctctgtgtcgttgtccgcatgcgaagtacctgtgggaagccatgggaaacaccaatgccatctcctgcaaaccggacagcaactggaaagattctgactggatccttgacatttcagggagagtttcaaaggaggagcgcatggggctcatgatgctgctgtggcgaatttggtatgtacgtaatgggattactcatggaaaggcagcaattccggtggaggtttcccaacgttttatcatcagttatatggcatcactgttggagattcgacaacacccgaatgccaatttgattaaagggaaacatgtggttcaatatgggtcgtcaatgcctttgccaagacaatgcaagccaagtgcagaatccagctcttggataagaccacaggaaggctggatgaagctaaatgttgatggctcatattaccctagtgatgggaagggaggaactggcgctgttctcagggacagctctgggaacctaatttttgcggcttgtggtgttttgcacagaccggcaagtgctctggaagctgagatggtagattgtagggaagggatcagcatggcgctacaatggacgctgctgcccatcattgtggaaacggactgcttggagatggtgcaattgattcactctgatgagaaggccatgtccgatttggcattcctgatcagggaagttaagctccttcttaaaggaaatagggagattgtcataaaaaaagttagtcgtggtcaaagcagagactgtcatgtcttagcaaataaaggtagatgtgagtccttaactgccttttggccggatgataattgtaactttatcccgcacgttttgggtgcggatgagtaa</cdnaseq>

Protein Sequence

<aaseq>MWRAVTNSLATMVNKKKRNLEQNSLCTICGTEEEDVAHALCRCP HAKYLWEAMGNTNAISCKPDSNWKDSDWILDISGRVSKEERMGLMMLLWRIWYVRNGI THGKAAIPVEVSQRFIISYMASLLEIRQHPNANLIKGKHVVQYGSSMPLPRQCKPSAE SSSWIRPQEGWMKLNVDGSYYPSDGKGGTGAVLRDSSGNLIFAACGVLHRPASALEAE MVDCREGISMALQWTLLPIIVETDCLEMVQLIHSDEKAMSDLAFLIREVKLLLKGNRE IVIKKVSRGQSRDCHVLANKGRCESLTAFWPDDNCNFIPHVLGADE</aaseq>

Gene Sequence

<dnaseqindica>6969..7937#tttcgccatttgttctcgcggcggaggccagcaacggcggtgcgcgcggcggcggaggcttgccgcgccggcggcgacccctccgattccctggcggctcctggacggcgcgaccttcgccgcgaatcggtggtatacgctcttctcgccgcgcccgttcgtcgatctcctcctcctcctcctcctcctccttgtttgatctcgctggaaattatgtcggaatcgcaggaatggagacgcggattggtggcttggcaagtcgtagcggagatgggatgctggagcatgtggattggggttcctgggcggaatgcataggtacgatctctcgatgtcccgtggattttgcttctctcatcacatgcctctgaactgttcgatggaatgcctctgcgccaacttcttgctagtttcctcacctgtcccgaactcgcgttcgattggcaccatggaattgctcctgtgcatcgatttgagctttggtatactgataccgaacctggagtcaatcatgcacagttgcctttcctttcagaatcgcacacaagataaatactccctccgttctcacattcatattgatgttaatctagatagcattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaagaagtatgatatatgctggtccttcaacctttttgattatttcaacttttcaagtaccaacactcttacagtacaataaatatgctagattactatcaatctctagggacgtttcatattgatcaaaataacaagttattcttcctgtgtattagtgtatatgctatactactatacaatctatgttacatattgaagttctgattctccaaaagaaaacgtcatacgaatctccatgcatgttctgtggtatggtcaggattaggaatgctgatttctcatcccctcctttttttgcttgtgcatttcctcactcagcactgagaacaacatcttctatgcgataattagttactgagtacttactcagatttccaagaacatcaccatcagtctagatctcgtacgtcattcctacccgcaacagtctattatggggaacacatgtgatcttctctggttgcctgaagttcttcctaatgaaattgtagacataatcaactattattttcttaaggaaatcggcgtttggttctgccaccacattagtttctcccagcagatggactacaccattccccatctctttgtgaattgactgtatctcatccatgcatccatttcttggttccgtcgtgtgttggtctgaattgtttctggatgacattgcatcttgaacttcagaggtaggatccgttacacctcctatttcttttattgattctccttcaagggaatgactactttggctgtagagggattcctcgtggatgaattgcttcaagttttcaataactaagctctcaaattctgctggatcttctactttatcattgtatccatagcgcaccacacatcggaataccctgtattcttttggctccacatatcggaagagaaaccgttcctttgtttctatcttgctgatcggtaagtactttatggagataatcacaagtactgaatgaatggaaggtactttttccaccaaatgaggaagtatgggtgggatgccttgcacaagttcagagtatagaaaacctattcctggcagcctggcaagattttgctttactgccaactctgccacataattgtttgatactttgttccggagctcatatttgtaccgatgaacgtgaacataatgccatgtggccattataaacatcaaaatggctgaaaaaactagtggcaagtatccaccttgagtaaacttgtagaatgctgaagataagtatatgagctctgcaccaccaaatattactggaaagagtgcaatccacaaaagacttgtcttccatatcatgaccatcactagagtgactagtagtgttgttataaacatcacaaagacaacagcaatacctgcacaatatagtgatgatatgagatgtctgatcataaaactggtacattaataatgttatcataacatgttgacagatcatgtccatccttgctttttaaagaacatttgataaaatcgttggtgtcactggataaagggactaatctgtagaattttgttgatatatcttatgccgacaccgtcaatcttacttagaatctagattcttgctaaatactgtaatatttgttaggctgagttcacagcttaagcagtaccattctgttaatgttacgatttgcttgcagtcttgcctgatagatttgggcagttatcaggtctagagaaattatagtatatatctttttggttatttaagacacagtaacatcaaattacctcaaataattgatgattttagatgggtttgtggaattaagagaaactgtaccaaacaggaaacatatggttcttgagaaagaatattctctatcttagagtaaaaatgctctgagttcaagtattgaatcacttgttccatgtttatattgggttagaacttagaaggaagggatacttgtttctcgagctgaggcttaccgtatgcattgccgatcttgtctgtagtttggaaaatagctgtaacagctacacataaaaccatcaatacataattgatctctggaatgtacacttgcccatgaaacttcgttgaggtgtggatcacacgaactcgtggaaaacaacctagaatttgggactgagcaatgattgcgaatgcaccagatatcatagcctggcttgcaattatggcagctgcgactgccaccacaaatgttggccaatataatgggtctgataacaatgccaatgagttctttgttagttctaatatttcaaatgtgcaaatcatggcatttgtttgctgtctttagttattgtttgtacctggaattgatttgtagaatgtatctgcaacgtgttctggatagatgcgaagatatgcagcttgtccaatgtatgccagtagtactgaaggaaggagaactacagaaaagccaatctgcagcgcaacaaaaatatttattttaaatgtcttaagtatagtagtatgaaaatcaagaacaacagttacaaagttcaaatggatctcaatccctgtcttatagtacccctaggaggctaggagttttgctattgggttgattagtttttgtgtgcatgcattcagaggaaaagtacttccttacctgaatggctctcacattgaagtgaccaaggtcagcaaacattgcttctgtccctgtttcatcaaagatgtggtatacgtgtcaaaacttatctgtcaaaatcttgtggtgataacatggagattggaggcttattgcaaagtaataatgttggggatcatgagagtagtagtacctgtaatgcataatataacacctccaagggaaatccagccttgcttcccatttctttcaaaatagtccacaatgtatttgggattgaatgcttttagaacaccagtatcatgtttgaacagattataaactccagtaccagcaataaagataaaccatgtcaagattatagggccaaatgagtaaccaactttgtccgtgccaaaacgctgaacaaggaagaggacaatcagaatagcaattgcgatgccagcaatttgtcctgttgatagggccaaaaaggtcaaatcaaatacatcctgagcagtacttggcttttcaagtctctctctgaaatacagtgagaagcacataatgattggtttaccttgagtcagggactttgctgattccttgatccccccaacagcgctaagcactataatattaccaaaaagaaaaaaaatgcatgagttactttgaaacacttcagcatgtgttcatgcagttcagaagggagatatcgtgtttttaataacccatgtctgcttcaatcatcccttccatgcaactttacattatagccatttaatcatcagcaatgagtccagaaagtgaaagaaaactcacctgaaatacatggagttagtacgccgtcaccaatcaccatagatgttgccagaattgttactaggaaaagtatgatcttaaaatttggactgttttccatcttttccttaatccaatgagcccgcttgacgcgatttgagggggactctaacttgtagtgtgagaccattgcatcttctgcctgctgattgggtatcaagctaatcctagcataccgagatatcaaggaataaagtgcaaatgttccacctgcaagattaaaaattgataagaaatgtgaaattatgatgaaataaatcgttgcatgcatatggtttctaagccataattctattcagggaattcatttaaacactgtggttggagtgtttttttatatttctttatgtttgccccattgatcattcttttcttggtaaagttgcttttgagtttttatcttgcagaaactctgcttgcaataaaagcataattctttagttgttcgaaggacttctctgtggccatatacatgtgttctgaagatgaatgaaagatgttcactcaccatcgccattgtcatttgctcttaaaacaatgaagcagtattttattaatgggaggagaaccacagtgtagataatcagagacataacaccaaggatgtcattggtgtccttgatcccgttggtaaaggtgctggagaacacatagaggggagaagtccccatgtccccataaaccacgcctatgctctggaaggccaagtgtagtgtggtcgcccatccaacctgtgtttcagcatcaagcatattctcaaatcagattgcattcggctcacatgaagatctcttcttcttgctacactagtcatgcaaaacttaagatgataaagaagatagtatattagttgctgcagaacatttcttttcaaaatattcttcctccattttgtgaagttctgggagtattcttattaagttgaagttcatgaaaaagtgtatactgttataggaattcaattgtctgtttgaagaacaaaccttggctgtatggctttggccacctggaatctttccagcttccatgtgcagtgaatcaaatctctgcaaccttgttgttgtttgcagcgtcttctccgattcaaatgcagcgtttggacccctttcagcgcctccattgctgcttgtgtgcagaggctcggtcattctcagtgtatggaatgtttgctcaggccgaccttctgtgttgtttaagcatgcgtgacttggcttatataggcatgtatgggtggggccaagcatgacacttgttattttcttgcaagttgcaacctttgagatcttgtcttatgaattgtgatgctgaagtatgaatggtgccacaggatagacgggaaatcagtgcaactaattggatttttcattttatgctagtgtagtcaaatattgttatcatttgctttactcacggagtcttccttctgtgctgcagctgtgaatcttgtgatctgcattaactagtgaaggtggctaaagggagaaaggcacggtgacttttcttcagaagcgcgtcctgtcacctgtgacttgtgagttctcgtgctgaataccagtaaaactttccataagcatttcgtttcagttcagttccaacttatcgtctgcttgcttcatgaatgtggaaagaaacctcatctccatgccatttcaacggttaagagtttatcaggaattcaggatatatgtcgctttgctagttggcctgcagaaatcatcacttatctcaggaaaaatactctgtctgcagacttaatcatcaagtagggatagatgcaaggaatgcgagattttagatgtcactcaatccttccaggctaccagtcctttttgcacaaggatgatcgaactattttgctgggatatctgctgtcacttaaaaaattttatatagaagtttttttcaaataataataataagatctattttttaagtttgtaatagtcaacactcaattaatcatgcactaataacaaacctagttgtgcaaattgattttcacaaacggccattaaaaagaggatcacctaccttaaacctcacttggctactagtgtgaagtacaattaggaaagttttgccttcagcacgagcaagtcacgttcgcatgaacgaccttttggccatttgattagtcagaagctttgaacagtgtataacggcccaagttgttgccaaaagtatgacttcaatattgttgggcgctaacttgagcagctatcgtaggcaaagatgagaagcatctttctgcaagctggttctgttaagttttaactccctttcatgttgaactgcaacgtggacttgaccactcgcttctttctcgtgcaggatcctttcaaagaaagggatttcgattctctgaagcaagtcagagaagcacggcttggtagttttgagctaatcttgctcatccattcgaagacaacgtgctacagtagatgcaactgctacaggtgcagtaatgtttgctacaggcaactgatacatgtacagttctctcccagattttttactgatccagccttccaggtcatttattcaccggtgacttgtttgtgtaggatggtggcaagtgtcaagtgtgtgaattcttgaaaattaaggaagacctgcctgactaaggtggcatgtatctatcaccgcgtgcgatttccaaggtacgcaagtcttcagctaatggcagtgcacatcaattctactttgctgcttctagactagcgcacatcaatagcatgcaagacttttccatgttcagtttgatcttgctgcgtgacgtagctggtagattagtgctgataatagttcaagctcatcaggaaatgagcttggtaaagcttggaaccagctttggaactgtaatgtgcccccaaaagtcaaggtgtttatgtggagagctgtcactaacagtctggcaactatggtgaataagaagaaaaggaatctagagcaaaactccttgtgtaccatctgtggaacagaggaagaggatgttgctcacgctctgtgtcgttgtccgcatgcgaagtacctgtgggaagccatgggaaacaccaatgccatctcctgcaaaccggacagcaactggaaagattctgactggatccttgacatttcagggagagtttcaaaggaggagcgcatggggctcatgatgctgctgtggcgaatttggtatgtacgtaatgggattactcatggaaaggcagcaattccggtggaggtttcccaacgttttatcatcagttatatggcatcactgttggagattcgacaacacccgaatgccaatttgattaaagggaaacatgtggttcaatatgggtcgtcaatgcctttgccaagacaatgcaagccaagtgcagaatccagctcttggataagaccacaggaaggctggatgaagctaaatgttgatggctcatattaccctagtgatgggaagggaggaactggcgctgttctcagggacagctctgggaacctaatttttgcggcttgtggtgttttgcacagaccggcaagtgctctggaagctgagatggtagattgtagggaagggatcagcatggcgctacaatggacgctgctgcccatcattgtggaaacggactgcttggagatggtgcaattgattcactctgatgagaaggccatgtccgatttggcattcctgatcagggaagttaagctccttcttaaaggaaatagggagattgtcataaaaaaagttagtcgtggtcaaagcagagactgtcatgtcttagcaaataaaggtagatgtgagtccttaactgccttttggccggatgataattgtaactttatcccgcacgttttgggtgcggatgagtaatatatctcccttttccccgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0930300, RefSeq:Os01g0930300