Os01g0931200

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Revision as of 05:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0931200| Description = Armadillo-like helical domain containing protein| Version = NM_001051830.1 GI:115442030 GeneID:4326816| Length = 158...")
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Gene Name

Os01g0931200

Description

Armadillo-like helical domain containing protein

Version

NM_001051830.1 GI:115442030 GeneID:4326816

Length

1582 bp

Definition

Oryza sativa Japonica Group Os01g0931200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42657633..42659214

Sequence Coding Region

42657985..42658455,42658539..42658683,42658791..42659128

Expression

GEO Profiles:Os01g0931200

Genome Context

<gbrowseImage1> name=NC_008394:42657633..42659214 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42657633..42659214 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcactccgcgcgctcgacaacacgctgccgatggcgtcggcggagcggcccaagaagttgcccaagctgtccgccgccgccgccgccgtcgtcccggcggcctcacccgaggggaagaggaagaagaacgacgagaactcggcgcccaaggccacaacggagcaggcggtggagtacgtccgctccgaggatctccagccggtgccccaccccaaggccaaggcggcggggttggtggcggagcttgactccaaggactggatccgggcgtgcgacgcgctcaacgacgcgcgccgcctcgcgatccaccacccctccctcctcaaccccatccttggcaaggtgatgctggcgatcgtgaagacgatgaagagcccgcgcagcgcggtgtgcaagacctccatcatggcgtgcaccgacgtgttcgactccttcggcaacctcctctcctccgcctccgacgacgccttcgacaagctgctgcttcagctgctgctgaaggcgtcgcaggacaagcggttcgtggcggaggaggcggagaaggcgatgcgggcgatggcggcgtcgatgcctccccttccgctcctcaggaagctcaaggcgtacgtccaccacgccaacctcagggtgagggccaaggccgccgtcgccatgtcgcagtgcgcgtcgaggatggacgtcgcgacgatgaaggagttcgggatgtcggcgatgctgcaggtggcggcggagctgctgagcgaccggctgccggaggcgagggaggcggcgcgcgggatggtgaactcgatgcacgccgccttctccaaggaggccgccgcggcgagggaggaggaggagggcgccgccgcggccgcggccgcgtcgtgggagagcctctgcgcgctcagcttgccgcccatctcggcgcaatccgtcgccaagatcgtctcgcagtcgcagtcgcagtag</cdnaseq>

Protein Sequence

<aaseq>MALRALDNTLPMASAERPKKLPKLSAAAAAVVPAASPEGKRKKN DENSAPKATTEQAVEYVRSEDLQPVPHPKAKAAGLVAELDSKDWIRACDALNDARRLA IHHPSLLNPILGKVMLAIVKTMKSPRSAVCKTSIMACTDVFDSFGNLLSSASDDAFDK LLLQLLLKASQDKRFVAEEAEKAMRAMAASMPPLPLLRKLKAYVHHANLRVRAKAAVA MSQCASRMDVATMKEFGMSAMLQVAAELLSDRLPEAREAARGMVNSMHAAFSKEAAAA REEEEGAAAAAAASWESLCALSLPPISAQSVAKIVSQSQSQ</aaseq>

Gene Sequence

<dnaseqindica>760..1230#532..676#87..424#gcatcaactactaccccaaattttctatctccaatttcttcacccttctcagatcgatcaggaagcagcaagcaaatccatcatccatggcactccgcgcgctcgacaacacgctgccgatggcgtcggcggagcggcccaagaagttgcccaagctgtccgccgccgccgccgccgtcgtcccggcggcctcacccgaggggaagaggaagaagaacgacgagaactcggcgcccaaggccacaacggagcaggcggtggagtacgtccgctccgaggatctccagccggtgccccaccccaaggccaaggcggcggggttggtggcggagcttgactccaaggactggatccgggcgtgcgacgcgctcaacgacgcgcgccgcctcgcgatccaccacccctccctcctcaaccccatcctgtacgcgctccagttcatccacaattcactgctcttgattttgagcaggagaagtgttggtgggattttcaatttgatttgatttggttttgtggctaatcgagcagtggcaaggtgatgctggcgatcgtgaagacgatgaagagcccgcgcagcgcggtgtgcaagacctccatcatggcgtgcaccgacgtgttcgactccttcggcaacctcctctcctccgcctccgacgacgccttcgacaagctggtacgttcttacaatggctgaacaatctacaatcttcagttcactgagctgacaacaatttgcggttgcaaaaatcaccgcagctgcttcagctgctgctgaaggcgtcgcaggacaagcggttcgtggcggaggaggcggagaaggcgatgcgggcgatggcggcgtcgatgcctccccttccgctcctcaggaagctcaaggcgtacgtccaccacgccaacctcagggtgagggccaaggccgccgtcgccatgtcgcagtgcgcgtcgaggatggacgtcgcgacgatgaaggagttcgggatgtcggcgatgctgcaggtggcggcggagctgctgagcgaccggctgccggaggcgagggaggcggcgcgcgggatggtgaactcgatgcacgccgccttctccaaggaggccgccgcggcgagggaggaggaggagggcgccgccgcggccgcggccgcgtcgtgggagagcctctgcgcgctcagcttgccgcccatctcggcgcaatccgtcgccaagatcgtctcgcagtcgcagtcgcagtagccatccgtcgccaagatcatctcgctgatggttgtagctttcgatttgatttgatggatggttcggcacgcacgccgaggcattcaactgctttggtttagtttagtttagcttcgtttgagttgcttaccgtgaggggggcgatttgtttttttatgtctttgtttattattaaagcatgctatctcgcatggttgtttgaatactagtagtatttttcatttaggaattgtttatgtttagactttggaataactcaagttgtatcgttttgattgggctattcctcaacgtggtctcaaaatcaaattctatgtgcgatggccccctttcttcggatttatcatcggat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0931200, RefSeq:Os01g0931200