Os01g0931300

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Revision as of 05:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0931300| Description = Tafazzin family protein| Version = NM_001051831.2 GI:297598245 GeneID:4326817| Length = 3442 bp| Definition = Oryza...")
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Gene Name

Os01g0931300

Description

Tafazzin family protein

Version

NM_001051831.2 GI:297598245 GeneID:4326817

Length

3442 bp

Definition

Oryza sativa Japonica Group Os01g0931300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42659762..42663203

Sequence Coding Region

42660032..42660652,42660753..42660858,42661029..42661147,42661683..42661880,42662147..42662212
,42662286..42662404,42662783..42663077

Expression

GEO Profiles:Os01g0931300

Genome Context

<gbrowseImage1> name=NC_008394:42659762..42663203 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42659762..42663203 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccccaatggcgggcggcggcggggtaccgtggggggaccgggccagggtggtcggggcgcagatccgcagcaggttccgcgtcggcgtggcgcccgtggaccggcggtggctgtggcggcgcggggacgggcgcgtcgcctccgaggcggtccggcagtggacggaacgcgtgcggagcctgtggcagagggagaagagtacggatcagatctcctcgtctccggggacgtcccaggtggcggccgcggcgaagccatcatcgagtgctttgaggttctacagaaagaaagtgggcaaggaggttgatggaattgaagattctgttatttttcggtcgcttcaagcattggctgttcctcttattggcaatgcttgtcatatttttatgcatggcctcaactctgttcagatttatggtgcagagaaacttcagcaggcattacaggagagacctaaaggcaagcctctcctaacggtcagcaatcatgtggcagctatggatgatccctttgtaattgcgtcaattctcccaccatcagtcatgttggaagctcaaaagctgagatggacattatgtgcgagtgatcgttgctttacaaatccaattttgtctacattcttcaggtctgttaaagtgctacctgtttctcgtggcgatggcatctaccaaaagggaatggacatggcactttcaaagttgaacaatggtggatgggttcatattttcccagaaggaagtcgttcaaaggatggagggaaaaccgtcgctcctgccaagagaggtgttggaagattggtaatggacgctgacagccttccagttgtaataccctttgtccatacaggaatgcaggatataatgcctgtcggaaaacgtattccaagagcaggcaaaagggtgattgtggttgttggtgatccaatcaacttcaacgaccttatcattgacaacagcgatgaaacccaacacatctctagaggcattttgtatgacaaagcaacagaaaggattgggcagagactgcaggaactgaaagccgaagtcgatagattagcagcagagcagaaatctgaactccaacatcatcatgcccgtgatactgtcaactatggtacccgactgtggcagcaggttgattgggaagcatttggcatggagagttcaatgctgtcaccagaaccttcagacgtgcaagagccgttgaagaaagccaagcctgtactacacctggaatctgaacatgccaagcctgaactacacctggaacctgagcaagccaagcatgagctacacacggaacaatgcgttcctgcagctccaagtgccgagatctgctccaatttcggtgttccgctcttcttcagacagcacacggacccttctgagctcatggggtttgccgcccgtggcctgctcaagaatggcaggttcatggaggaggaaggctaccgggaattgcaacggcagggcgcaatgaacatgttttggggatctcaggccaacaatactgtactatag</cdnaseq>

Protein Sequence

<aaseq>MAPMAGGGGVPWGDRARVVGAQIRSRFRVGVAPVDRRWLWRRGD GRVASEAVRQWTERVRSLWQREKSTDQISSSPGTSQVAAAAKPSSSALRFYRKKVGKE VDGIEDSVIFRSLQALAVPLIGNACHIFMHGLNSVQIYGAEKLQQALQERPKGKPLLT VSNHVAAMDDPFVIASILPPSVMLEAQKLRWTLCASDRCFTNPILSTFFRSVKVLPVS RGDGIYQKGMDMALSKLNNGGWVHIFPEGSRSKDGGKTVAPAKRGVGRLVMDADSLPV VIPFVHTGMQDIMPVGKRIPRAGKRVIVVVGDPINFNDLIIDNSDETQHISRGILYDK ATERIGQRLQELKAEVDRLAAEQKSELQHHHARDTVNYGTRLWQQVDWEAFGMESSML SPEPSDVQEPLKKAKPVLHLESEHAKPELHLEPEQAKHELHTEQCVPAAPSAEICSNF GVPLFFRQHTDPSELMGFAARGLLKNGRFMEEEGYRELQRQGAMNMFWGSQANNTVL</aaseq>

Gene Sequence

<dnaseqindica>2552..3172#2346..2451#2057..2175#1324..1521#992..1057#800..918#127..421#gcgcttcgatttgattttaggtcaatgctcgaagcaatttctcctcctcgatccttctagaagcccgaatcgaaaggctaaaaccctagaagcagatacgcttcagcgcgaaaccctaatccccaaatggccccaatggcgggcggcggcggggtaccgtggggggaccgggccagggtggtcggggcgcagatccgcagcaggttccgcgtcggcgtggcgcccgtggaccggcggtggctgtggcggcgcggggacgggcgcgtcgcctccgaggcggtccggcagtggacggaacgcgtgcggagcctgtggcagagggagaagagtacggatcagatctcctcgtctccggggacgtcccaggtggcggccgcggcgaagccatcatcgagtgctttgaggttctacagaaagaaaggtgcaatcctcttttcttattttgatcgatctgattcgcctcttgatgtgccctaatgatgtgtattaatggctcgaatggtatgcgcctaatgctatataatggttcgatacttcaatcgtccatagctaatcagtaaacactcatttcttgtgatctgatgtttgtaacttcatagtatcttgtcctctttgatgttggttgattatgattaatacccctctggcggaagaacctgcggaataacctgattttagccttatgactcgtggtttattttgctgatgatggatcatatgaatatactttggtctaaaaaaaatatttgagtagatttttccttcttttttttctgaattattttgtttctgtctatagtgggcaaggaggttgatggaattgaagattctgttatttttcggtcgcttcaagcattggctgttcctcttattggcaatgcttgtcatatttttatgcatggcctcaactctgttcaggtattgtgctggagagcacttctcatacttgaatctatactgtttcacttgtctaaacaaggaattcttgcagatttatggtgcagagaaacttcagcaggcattacaggagagacctaaaggcaagcctctcctaacggtatgtgatattatagtcacaacgcatactctgtttcatgacaatatggcatactattatgagcttgctaagtggaatgactgtattatcttcttttagaagattatcagttgcctacttttctcaatggattgtggtatcaagtgatttcaaatcattcacctaaaaactctagttgatatcttcttagtataacacatgttccagctctcgtgtatacattgtcctgaccacttttctgtttctatctcgtgtatgtatttcaggtcagcaatcatgtggcagctatggatgatccctttgtaattgcgtcaattctcccaccatcagtcatgttggaagctcaaaagctgagatggacattatgtgcgagtgatcgttgctttacaaatccaattttgtctacattcttcaggtctgttaaagtgctacctgtttctcgtggcgatggcatctaccaaaaggtatcttcattgagattattatgtttgattgctgcttaatggtgtaaaattgtttctttaaatatttctgcagcagagtgtcatgcttgtttgtgttgatgaatacatttattgatgattagtgaccaaaaatggtgtttaaaaaattggctgttaagctgtcctgtaagggtgtcgctctaaagtggacagttggaagctactctatgaaatttgctttaaactactcaactttcctataaatgacgagcaatttgaagactacattcttttcagtagctatagtgctatacttgtgagtaatattgctggcactgcattgaagccacatgggcatactaaaccattttttggatcagtattccaagctatctagtgttttggggtgtacttttcaggaggagtatgcttcatatataaaaaatgattttcccctttgaacccagatgtataatgtattgcatgcctatatgcccctttagtgcattatcaggcttgctcttcactaatcactaccattattttatttgttcagggaatggacatggcactttcaaagttgaacaatggtggatgggttcatattttcccagaaggaagtcgttcaaaggatggagggaaaaccgtcgctcctgccaagagaggtgttggaaggttagaagatcatttgtactgaacaacctgttattagctgtcttctgtttctgcaataaaacctgcattttacatataaatataccattttgcaaagtcttcggtttatataatttttatttttgttgattctcaagcacccagcctaagtctcccttttgtcttgccagattggtaatggacgctgacagccttccagttgtaataccctttgtccatacaggaatgcaggatataatgcctgtcggaaaacgtattccaagagcaggcaaaagggtgtgtacttttgtacatattaactgatgcaagttttattgctatgcttgtgtgaatagcaaggtactaacgttgaagccatttattttgtttcttttaggtgattgtggttgttggtgatccaatcaacttcaacgaccttatcattgacaacagcgatgaaacccaacacatctctagaggcattttgtatgacaaagcaacagaaaggattgggcagagactgcaggaactgaaagccgaagtcgatagattagcagcagagcagaaatctgaactccaacatcatcatgcccgtgatactgtcaactatggtacccgactgtggcagcaggttgattgggaagcatttggcatggagagttcaatgctgtcaccagaaccttcagacgtgcaagagccgttgaagaaagccaagcctgtactacacctggaatctgaacatgccaagcctgaactacacctggaacctgagcaagccaagcatgagctacacacggaacaatgcgttcctgcagctccaagtgccgagatctgctccaatttcggtgttccgctcttcttcagacagcacacggacccttctgagctcatggggtttgccgcccgtggcctgctcaagaatggcaggttcatggaggaggaaggctaccgggaattgcaacggcagggcgcaatgaacatgttttggggatctcaggccaacaatactgtactatagtgagcggccttactcatgaatgtggccgcgccctcctttgtacataagtttactgaagatgacacgccgacacgaattaggacagcttcttgtttctttgctgcatacagttttggaacaaacgaagtggacacaccttctttctcctaggggcaacttgaatggcatatgcatttcgcttctcaagaatcatataatacgcatggtttatattatcatgtaaacatggttacattctaaatcaagagcctcatcttttcgcttattctt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0931300, RefSeq:Os01g0931300