Os01g0931400

From RiceWiki
Revision as of 05:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0931400| Description = Thiamine pyrophosphokinase family protein| Version = NM_001051832.1 GI:115442034 GeneID:4326818| Length = 3176 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0931400

Description

Thiamine pyrophosphokinase family protein

Version

NM_001051832.1 GI:115442034 GeneID:4326818

Length

3176 bp

Definition

Oryza sativa Japonica Group Os01g0931400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42663556..42666731

Sequence Coding Region

42663754..42663869,42663957..42664206,42664301..42664402,42665175..42665247,42666078..42666174
,42666293..42666449

Expression

GEO Profiles:Os01g0931400

Genome Context

<gbrowseImage1> name=NC_008394:42663556..42666731 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42663556..42666731 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgctgccgacgatgacccactcctcctccttcctccgcctccccgccacctcctcgccgcacccgccgcccgcggatgatgcttccgcggcctacgccgtcgtcgtcctcaaccagcgcctgccccgcttcgcccccctcctctgggaccgcgcgcggctgcgggtgtgcgccgacgggggtgccaaccgggtgttcgatggaatgccggagctgctgcccgccgaggacccggaccaggtccgcatgaggtacaagccagatgtgatcaaaggggatatggactcaataaggccagaagtgaaggaatattattccaatctgggtgccgaaatagttgatgaatcacatgatcaggacaccactgacctgcataaatgtgtatcatttatcaccagaaatccacctggctctgaagagtctaatctgtatattcttgttcttggtgcacttggaggaaggttcgatcatgagatggggaacatcaacgtgttatatcgcttctcaaacatcaggattgtcctcctgtctgatgactgctcaatctttctgctcccaaagacgcacagccacgagatccatatcgagcgatcaatcgagggtcctcattgtggattgattccaatgggttcaccatcggctagcactaccaccacagggctccggtggaatttagataatactagcatgagctacggtggactgataagcacatctaacatcgtggaagaggaaacagttaggatcacttcagattctgatctgatttggacaatatcactccggaactga</cdnaseq>

Protein Sequence

<aaseq>MPLPTMTHSSSFLRLPATSSPHPPPADDASAAYAVVVLNQRLPR FAPLLWDRARLRVCADGGANRVFDGMPELLPAEDPDQVRMRYKPDVIKGDMDSIRPEV KEYYSNLGAEIVDESHDQDTTDLHKCVSFITRNPPGSEESNLYILVLGALGGRFDHEM GNINVLYRFSNIRIVLLSDDCSIFLLPKTHSHEIHIERSIEGPHCGLIPMGSPSASTT TTGLRWNLDNTSMSYGGLISTSNIVEEETVRITSDSDLIWTISLRN</aaseq>

Gene Sequence

<dnaseqindica>2863..2978#2526..2775#2330..2431#1485..1557#558..654#283..439#gttctacatcttgcctcgccgtgcaccgcagtccgccgcactaccagcgccggcgcttaccgtcgttaccgacgcagcctcgcctacactacaccctcgatccttccccaaccaccaccgcagcaaatacaccgccgcggcgccgcgcctcttggaggcttcgacgcgcgcccaaaaagcgaccgcggcttcccgttcccgaacaccaccacccctcccccgaatcgaatccaatcaaatccaatcgaatcgcctctccgtcctccgcggcggcgggccgccatgccgctgccgacgatgacccactcctcctccttcctccgcctccccgccacctcctcgccgcacccgccgcccgcggatgatgcttccgcggcctacgccgtcgtcgtcctcaaccagcgcctgccccgcttcgcccccctcctctgggaccgcggtatccttcttcttctttgcctcgatgatgcccttcgttcgcttttttaggtttggtgtgggctggctgactgatgatgacgtggtttgtggtgtgtcgtggtgggtggcgagagcagcgcggctgcgggtgtgcgccgacgggggtgccaaccgggtgttcgatggaatgccggagctgctgcccgccgaggacccggaccaggtccgcatgaggtgaccgatagtttccagctttatttatccccccccccccccccccccccctactgttctttgtttgcatgtgtcctctcctcgcgcgttttgagtcaggcttggcggtcatgatggaatgcgtgggaggcgagtgaatcttgttttcgttagtatttcattatgcagaggagtgaaactgtaaatgttgtcatggaagcgagtactgtctagctgaaccagataccactagttaagtgttatttctcgatatgtttatctcccatgctttacatgtttccgttattatatgtttaagcaaatgctgaagttcccctgatatgttcaagttgagtaatttagtatgcaacaccttatagatgttaatttcctgttgggttatggtttagtgctttagctaacgaagtgctctttcatttgatgaactctgttaaaagttttgttcttatctgcatgattgctagttttgttttcggtgagcttagaataacattcttaaattagccgaagttgccctcacagacctgaatgtacgcgatattgcgccaaaggctatctgaagccacacaaaattactcaaaatctgggatgaactacaggtctaaagcagcttcaacttgtgtcttcttcactatgaacttttttttcctatctttggttgccaaaggtttgggagacatttatgcatccaacagaggagcatggctagttgatttgccatacctggtagttggcaagagactgttttctttaaattgttggttgggtttaaagacagcttctttgttgggtgttcatatatttattaatttgtgctcatcttcctgcaggtacaagccagatgtgatcaaaggggatatggactcaataaggccagaagtgaaggaatattattccaatctggtaactattttaaaaatcacttcaagttgaaactagctgctaaggctggatgttaaaccagcaatactgtatgcagcaactgtccaggcaattttcactgtaatgtgcagaaataaattgatgttgctggatgcagtatttttgtatgtaatatatatttggaattttggatgtcacaggctcacagtttaagtcttctaatttagatgactttactaattacagtaatatgtgaagaattattttcaatttcctttgtgaaatcagcatactgaaatgatttacagtgactaggttttaaacatatcaatgtccttaaaaatcaggaaggtataaacagcatgctttatttatattttagcattgctgtttaggtaatctgtatctaagaaaacaaaatgtgtattgcatggcctgatactgtattatctttttttttattgaaattgcatgctcagagtactgctatatgtacgtctctatttgtctttctggatatgttgttgattgtccacaagaagctcatctgcttaactaaaatatgtgcattttgttttgacctgttgactgctgtatatgttataaccactttcgagaggaacgatagtaagttcaataatgggagatccgtatttagttcaagttttttttttctttgtttgctatacacagctgatgcaatctgcttcaagaattaatatgtaacctcctaattctgatgagcttgacattgttctttgccatctaataacacgctgttcttctgttgcagggtgccgaaatagttgatgaatcacatgatcaggacaccactgacctgcataaatgtgtatcatttatcaccagaaatccacctggctctgaagagtctaatgtactgagctcaattgttaatcataacaagaatttcagaaccaccgaccacacaacattagccttacaaattttactgtattctttatctgcagctgtatattcttgttcttggtgcacttggaggaaggttcgatcatgagatggggaacatcaacgtgttatatcgcttctcaaacatcaggattgtcctcctgtctgatgactgctcaatctttctgctcccaaagacgcacagccacgagatccatatcgagcgatcaatcgagggtcctcattgtggattgattccaatgggttcaccatcggctagcactaccaccacagggctccggtggaatttaggtataagcatcaaactttacagttctttgttgtatcatgtatggcaacagcatctgaactgatagtcattctgcactttgtcttcagataatactagcatgagctacggtggactgataagcacatctaacatcgtggaagaggaaacagttaggatcacttcagattctgatctgatttggacaatatcactccggaactgagctttaaattacccataaatgtatcttgatccaaattttggctccttagtatagcatggatgggctacatttttgtaacttagatttttttttcactgatctactgttagtaaacaggaaaggtatccatatgtgtaagcctcttggacatgcatccattatagaaaaaaatattattaactgtgttgttcaattctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0931400, RefSeq:Os01g0931400