Os01g0934000

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Revision as of 05:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0934000| Description = WD40-like domain containing protein| Version = NM_001051842.1 GI:115442054 GeneID:4326829| Length = 4368 bp| Defini...")
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Gene Name

Os01g0934000

Description

WD40-like domain containing protein

Version

NM_001051842.1 GI:115442054 GeneID:4326829

Length

4368 bp

Definition

Oryza sativa Japonica Group Os01g0934000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42761535..42765902

Sequence Coding Region

42761767..42761863,42761951..42762077,42762626..42762827,42764902..42765849

Expression

GEO Profiles:Os01g0934000

Genome Context

<gbrowseImage1> name=NC_008394:42761535..42765902 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42761535..42765902 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgccgccgcacgacgcctcgccggccccaccaaaccctaaccccgtctccgacgaccccccgccgccgccgccggtgacggagacgaagccggagccggagccgcctctccccaccacctcgatcgaccccaccccgtctggcgacgaggagagcggcgatgactcctcgtcttctgtctcatccgcctcgtctacttcgcccacggccgccgcggctgctgctgctgcgggaggtggaggtggaggtggaggcgagagggcggctccccacccggcggcgaaggatctcctccatatctccttcaaccaggactacggctgcttcgcggcggggaccaagtcgggcttccgcatctacaactgcgatccattccgcgagatcttccgccgggacctcggggccgcgggggacaacggcgtcggcggtggaggaggaggaatcggcgtcgtggagatgctgttccggtgtaacatactggccctcgtcggcggcggagacgcccctcactacccgcctaacaaggtgatgatctgggacgaccaccagagccggtgtatcggggagctctccttccgctcccccgtgcgcggtgtccgcctccgccgcgatcgcatcatcgtggtgctagagaacaaaatcttcgtctacaatttcgcggacctgaagcttgttcaccagatcgagacggcgcctaacccgaagggcctctgcgcggtttcgcagcagcccggatcgattgtgctggtttgccctggtgcacagaaagggcaggttagagtggagcactatggtgccaggaagaccaaattcatcaatgcgcatacttcccgtgtcgcgtgctttgcattatcacaggatgggaggctcattgctactgccagcaccaaggggacacttgttagaatctacaatgctgccgagggcaatctcctgcaggaagtacggagaggtgctgatagagcagaaatatatagcttggcgttctccaacaatttgcaatatttggctgtatcaagtgataaaggaacaatacatgtgttcaatctaaagataaatgttggattaaccacgaatgataagcccctgcctgctccagatcctgatgttccacatatcagtccatctctttctttcattaagggtgtactaccaaaatatttccactcggagtggtctgtagctcagttcagactccacgagggggagcaatatattgttgcatttggccatgagaagaataccgtggcagttgttggcatggatggaagcttctaccgatgccagttcgaccctgtaaacggaggagagatgctgcagctggagtgctacaatttcctaaaaccatcatcggatcaaccacagtag</cdnaseq>

Protein Sequence

<aaseq>MATPPHDASPAPPNPNPVSDDPPPPPPVTETKPEPEPPLPTTSI DPTPSGDEESGDDSSSSVSSASSTSPTAAAAAAAAGGGGGGGGERAAPHPAAKDLLHI SFNQDYGCFAAGTKSGFRIYNCDPFREIFRRDLGAAGDNGVGGGGGGIGVVEMLFRCN ILALVGGGDAPHYPPNKVMIWDDHQSRCIGELSFRSPVRGVRLRRDRIIVVLENKIFV YNFADLKLVHQIETAPNPKGLCAVSQQPGSIVLVCPGAQKGQVRVEHYGARKTKFINA HTSRVACFALSQDGRLIATASTKGTLVRIYNAAEGNLLQEVRRGADRAEIYSLAFSNN LQYLAVSSDKGTIHVFNLKINVGLTTNDKPLPAPDPDVPHISPSLSFIKGVLPKYFHS EWSVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGSFYRCQFDPVNGGEMLQLECYNFLK PSSDQPQ</aaseq>

Gene Sequence

<dnaseqindica>4040..4136#3826..3952#3076..3277#54..1001#cccgcaacctccgactccacgagctctcttcccccacgcttccgattctgcccatggcgacgccgccgcacgacgcctcgccggccccaccaaaccctaaccccgtctccgacgaccccccgccgccgccgccggtgacggagacgaagccggagccggagccgcctctccccaccacctcgatcgaccccaccccgtctggcgacgaggagagcggcgatgactcctcgtcttctgtctcatccgcctcgtctacttcgcccacggccgccgcggctgctgctgctgcgggaggtggaggtggaggtggaggcgagagggcggctccccacccggcggcgaaggatctcctccatatctccttcaaccaggactacggctgcttcgcggcggggaccaagtcgggcttccgcatctacaactgcgatccattccgcgagatcttccgccgggacctcggggccgcgggggacaacggcgtcggcggtggaggaggaggaatcggcgtcgtggagatgctgttccggtgtaacatactggccctcgtcggcggcggagacgcccctcactacccgcctaacaaggtgatgatctgggacgaccaccagagccggtgtatcggggagctctccttccgctcccccgtgcgcggtgtccgcctccgccgcgatcgcatcatcgtggtgctagagaacaaaatcttcgtctacaatttcgcggacctgaagcttgttcaccagatcgagacggcgcctaacccgaagggcctctgcgcggtttcgcagcagcccggatcgattgtgctggtttgccctggtgcacagaaagggcaggttagagtggagcactatggtgccaggaagaccaaattcatcaatgcgcatacttcccgtgtcgcgtgctttgcattatcacaggatgggaggctcattgctactgccagcaccaaggggacacttgttagaatctacaatgctgccgagggcaatctcctgcaggaagtaagctccccaaaacattcatttagatgaacttgtatactttgactgtcaatgctagaattgattaacgcactataatttaggctgaatgcatataaaacacattgctgttaagcaacattagtatactataacctttctaagttgttatgtgtgacattactctagttcatgaaaagcttcatattttgtacaagactgcccatggtgaataattggttgaagcattataaagccgatggcggatgtttttttgctttaacatatatcagcagcaatttttgctgtgtttatgctgctgcatatcatactgcaatttttcaagctctttaaatgaaatgacagtgaatacctactgattgcttcaatttacaaatcaggaaatttttctagccattgttctaattattacagttctagatatactagagttgaatgaataacccaacccaagctttgtgatgccctatcctgtttcccttcttccatttgaaacttatggcacatcctgtctccctttttccacctgaaacttacagcttagaagggtaaggatttataactggatgcgtgctgaatgagtcatatgacatgtcgctttccaactgcgctcccttcttttggaaaaataacatactacctctggccatcgttatttgacaccgtgtgtcatatatcagtgaccggagggagtacttcatttcacttcgcaagtctgtaggactcgaggtgccaaacattggtagttggaccaaacaatagtaggccttttgtttctcggatgttttagtagttttgggtgctgcttgtcatagttcttgaggaaatatggtcctttcaagtatcaataaagcgcataacctttagctgatgatatggtctgaaccatttcctcagtaaaatagatatatgctgtatatcaacgttggggttttggagtcaagatggctatttattgatatggtggattctacaaagtagtaagatcacatggaaatgtaatgctagaatcatctggagtgttctgttatcctcctctgctcttaaatcaagacgtgtagccagtaactttcttacatgtaccatttgcttttcctttttttggatgaagattccaaaaaagatgttagattgaatgttcttgggtgtatctgaaaaagatgttagattggttggaatgtgttctagttaccattgaatgacttagtaccctgtaacatgcggctctttgtttttagatcagataaggaccatgtcagtcataaatacagagctaacacagttaaccagattagggcggaaacagagatgatatatgtaatgtagtgtacgaataacatagctcaaccagtcaacatggccgggatgcagtaacagaagtttttactagctatgataaatttaaaccttcaaaatacacattgaaaggcacatctcaccaggctcatcaaactagatacagtattgtttaattttgagggcgtctagagcgatgttaagaaacaaagatgtatgaatatgcttatatctaaacaccacatagctcagaacatgtcattccaccagacaggtatatctaaatccagtaaaaagtatctggaatacacaagggcagattcctgaatcaaatacttgatcccgtccacattcatatatatgttaatgaatctagatatatatgtgtgtctagattcattaacatatatatgaatgtgggcaatgctagaacgtcttataatatgaaacggagggagtatcagttttattctttattcagatttcaattttttttatcaacttgtaatttattgtgcaatcaacttttgagctttactagcttgattaaattctacttgcgggagactaaatgcattgcatcttgctagtatatcacataataagaacctatatataccagtaagtacttaccacataagaagatgtgtatgctcttgctcttgtcagtttgctaatttttaatcattattaagcttacggcatgatgaagttttgccattttatttttatttataggaatttgtcaattaatattttctgatttcttctgttataggtacggagaggtgctgatagagcagaaatatatagcttggcgttctccaacaatttgcaatatttggctgtatcaagtgataaaggaacaatacatgtgttcaatctaaagataaatgttggattaaccacgaatgataagcccctgcctgctccagatcctgatgttccacatatcagtccatctctttctttcattaagggtaactatatctctccatccacttatatatatacttttgtggttgaatgtttccatgtttgaaaatagtgatatactgcaatcatatgcagctctcctgtgtattcggaagaaaagaacaatgatatatattcctttaatttgcttttgaggcccatctttgccttttaagtttcatttttagaaagcaaatgataaggacttttaatatacatcaatatgttcgtctctgaattttcatggtatactaatcccattattaataacttgtatcctagtatcttctcctttttgcgcatttgttgttgcccttgctggaagcctgaaatcaacactgtatgaatggtcttatgatttttttatttatttgtacccaagtactggttgcatcttcaaagttcatgatatataggtacccgttttgtgtcattatttggttaaggttacatgtttacaatgatgaaaaatgctgtttttctggttttggttggattgcatgttactcttgggttagctcattttcacacattgattttctgttgctgtcaggtgtactaccaaaatatttccactcggagtggtctgtagctcagttcagactccacgagggggagcaatatattgttgcatttggccatgagaagaataccgtggcagttgttggcatggatggaaggtatgtgcatcaggattgaacattcgttgttgcttgttggaattccttactacaggtttgatcttatataccttccgtgtgttacagcttctaccgatgccagttcgaccctgtaaacggaggagagatgctgcagctggagtgctacaatttcctaaaaccatcatcggatcaaccacagtagcagcccaagcagcggatctgtttttcctcccttgtatcggggttgtacagtatctgtgtgccctctcgattattgttattatttgtaaatatatcttagtggtgattctacaagtatgctctgttgagggttaaaagaacccttgtgcagatggacataataatattactcccacgttagcaaatgctttcacgattcatgtttctctattatcctgaaaagttcatccagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0934000, RefSeq:Os01g0934000