Os01g0934300

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Revision as of 05:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0934300| Description = Similar to Flowering-time protein isoform beta| Version = NM_001185798.1 GI:297720730 GeneID:9267191| Length = 8437 ...")
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Gene Name

Os01g0934300

Description

Similar to Flowering-time protein isoform beta

Version

NM_001185798.1 GI:297720730 GeneID:9267191

Length

8437 bp

Definition

Oryza sativa Japonica Group Os01g0934300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42779358..42787794

Sequence Coding Region

42782260..42782267,42782825..42782932,42783038..42783089,42783204..42783244,42783369..42783448
,42783978..42784424,42785693..42786291,42786374..42787528

Expression

GEO Profiles:Os01g0934300

Genome Context

<gbrowseImage1> name=NC_008394:42779358..42787794 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42779358..42787794 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gacacaagatcagacatatcaagcaaggcgaggaacctcctctccaggttgagcaaagtgcttgtaagaagtcaggcattgaagaaatctcagaaggacttaatctgtaaacaaaggataagtgaaattctccgtgatgagtcttggaaatctgaagttgatattactgaggacatccttgccttgactgatgatgcaagtgagagcagaatgcctgagcccagaaaaacgccattgctgctcactgcttctgcggacgaatcaaataaaaagagttctctgcagacaaaatccaaagagaaaaggaaagttctacttgtagaacatccaaatcggaaagctgctggcaagaatgttaaccctgtcagaagcacatctacgaacaatagtagaccgttatctgcagatgatatccaaaaagcaaagatgcgtgccatgttcatgcaggagaaatatggcaaggttgacacaagcaaagtgattgaaaaacctcatatgatggaaattcaaaaaccgtctggcttagttgattcaaatgtaccgcttgtgcccagaacccctcttacttcaatcattaaacaacctgttgaccctagcccatcaacctctaaacaaagtacactatctccacctgataagccagaaattgcagttagcttgaagctgaacgtaacagccaaagaaaactttatagagaaattggattccaagagagttatttggcagataccaccagaggtttggatagaccctgcttggagtttaggtgctggagagaacagcaaagaatttgaggtccaaacccagagaaacaggcgtgagaaggaaaccttttatgctagtctaaaggacataccgttgaatccaaagggcccatgggatgtggaaatggactttgatgacagccttacaccggaaattccaattgagcagccaccagatgctgacgctatggaaacggatagcgtgagcacagcccctccaaacattgtggttcctgttgtggacaagcaaataggatcaacctcatcagtatctccagcagttgctgctggtgcgaacggtgcaacttctgaaccagatcttgagctgcttgcggtgctgctcaagaatccacaacttgtctttgctctaacttctaatcagggtgggaccctgccaagtgagcagaccgttgcacttctggacatgttgaagcagactggccttggactatcagagctggtaaatagcctggccaacaattctggggtccaaaaagagcccgaatctggtcctgaagctatccctgcttcgcttccatcgccaactcctccaaaagacctgatagccagggatggctggagttcagagttcccatcacaagtgaggacccaaaacttgcagcacgcccatttgccaaacagagcaaatgcacctcctgttgcaagcagcgtgcagcaaagtttctcaaatgttgtcagttcgttgccttcacaaccttatgcttcagcttctgctttgccggcacagactcgaactaatatgacatctctcccccagtcgatgatctccgtaaatccgtcaactcaacatgttgctcctatgaataatcttctgagcagagccacggtacaccagcacacccaatcatatgctttaacgtctgatcctgttgcagtggcggtccatcatcagccagcggtgaacaaactagcccatgaggttcagagcatctcacaccctgctgtatcacattcttcggtggctgaatcacatgcctcttacacatcatacacctggcaatctagtgttgctaccattgccgccactgggcgaaatgctacacctgatcgatgggctgcacctgcacgcactactaattcctttaacgctgccccatcaaattcaaaccatgtgacgtatcctaaccagaatgcttacagtaaccacagcacacaagctactacatacaattcttatggttcagctccagtctcgtcccactccctccacccagggcagggactggaccgaaatggctacactcacgcagcggagtaccagacgacaatggcgcgagacgccctatggcggaactcgcggtctcctgagcttggtgctggtgctgtgtatggtagtagctcacaaggctatgttcccgagccctcaaggcagtggaactacgggcagcagagctacaatcctgagccttattctaggcagtggagttctgggcaacaaagctacaacactgtcactgctgagccttccaggcagtggagctccgggcagcagagctacagcaacccagctgagccttcaaggcagtggagttcatcagcacatgcacaaccaagctacaaccctgagccttcaagaccctggaattcaggtcatcagagtcaaaaccctgaggcatcgaggcaatggagtcatcatcatggaaagcaagaacgttataatccgacagatggtagaaattcttatgatcaacattggaggagatga</cdnaseq>

Protein Sequence

<aaseq>DTRSDISSKARNLLSRLSKVLVRSQALKKSQKDLICKQRISEIL RDESWKSEVDITEDILALTDDASESRMPEPRKTPLLLTASADESNKKSSLQTKSKEKR KVLLVEHPNRKAAGKNVNPVRSTSTNNSRPLSADDIQKAKMRAMFMQEKYGKVDTSKV IEKPHMMEIQKPSGLVDSNVPLVPRTPLTSIIKQPVDPSPSTSKQSTLSPPDKPEIAV SLKLNVTAKENFIEKLDSKRVIWQIPPEVWIDPAWSLGAGENSKEFEVQTQRNRREKE TFYASLKDIPLNPKGPWDVEMDFDDSLTPEIPIEQPPDADAMETDSVSTAPPNIVVPV VDKQIGSTSSVSPAVAAGANGATSEPDLELLAVLLKNPQLVFALTSNQGGTLPSEQTV ALLDMLKQTGLGLSELVNSLANNSGVQKEPESGPEAIPASLPSPTPPKDLIARDGWSS EFPSQVRTQNLQHAHLPNRANAPPVASSVQQSFSNVVSSLPSQPYASASALPAQTRTN MTSLPQSMISVNPSTQHVAPMNNLLSRATVHQHTQSYALTSDPVAVAVHHQPAVNKLA HEVQSISHPAVSHSSVAESHASYTSYTWQSSVATIAATGRNATPDRWAAPARTTNSFN AAPSNSNHVTYPNQNAYSNHSTQATTYNSYGSAPVSSHSLHPGQGLDRNGYTHAAEYQ TTMARDALWRNSRSPELGAGAVYGSSSQGYVPEPSRQWNYGQQSYNPEPYSRQWSSGQ QSYNTVTAEPSRQWSSGQQSYSNPAEPSRQWSSSAHAQPSYNPEPSRPWNSGHQSQNP EASRQWSHHHGKQERYNPTDGRNSYDQHWRR</aaseq>

Gene Sequence

<dnaseqindica>2903..2910#3468..3575#3681..3732#3847..3887#4012..4091#4621..5067#6336..6934#7017..8171#gtccccaacctgcaaaccctaatcccgccgctgactcccccaaccacggcggcggcggcggcggaggcggaggcggctgcctgatgcccagccgcccgcgggggccatggagctcgtccccttcaagcccgaggccggggccctggtcgagtcgggcggcggggcccacggggactcgatcccggccatggtggcggcgcagcaggaactgctgcacgcgcaggtggaccagctccagctcctcgtcgtcgcgcagtgccgcctcaccggcgtcaaccccctcgcccaggagatggtcaggagctcctgtctctgatctgttttttttttctttctaatctctgcttctagtactcgtttgctcgatgtattagcgtatgcctttttgtctttgtaatggatagattttaggcttgatgaagtagcacatggagtgtttccggggactcatccattggttgctgagcttaggttttgatgctcatactatcctgatgttttgttcatgtcatcagttccaacttatttatttttacgtcgtggcgtttgtttgttcacttggtagtggctatgatgctccatgatgaaaattcacatttttaagtccgattttttaaattcgggcttgtgtaatgggttactactctaaaacccgaaattccagatatgtttatttctaatatttaggtcctcatacttcactaaccatacatggtcatgattctggttatatgtcgtcataagaaacactggcaaaattgcacctgagagagttgaaaatgaagcaacgcatttgtagggaccaagaagagtcactatctttttctccacataaatgatattcatgttagttttagtgtagcattgtgaatccgttttcttattgtctgtaaatgatatcacaaagttattacttgactggcatgagtaatggtatctgaaggggtgactttctatttgccttaaatgtatgctgcaacttcatgagccccaattactattttcgaaatgttttggtttggttttgcttttgccattaagtagtgacgtgcatctcatcttgcatcctgtttttgctgctgactaatgatcatctttaaaatgtctctttctttgtatttgccattaacctgtgacatgggtctcatcctgcaccctgttttttccgctaaactctcttgcatgtgggaccctataaaatggcaaaaatgagatgtcacaagttagcgacagaaacaataagctcccatcaaacacatttttattcaccagtcaacttatcttgcacgtttttgttcttgcaggctgctggggcattgtctatcaagataggtgagttgtttacctgtatcaattgaattatagcatgataaactaatatgggcaccgtaaacttgtataatgatgtatacatttgatagagttaaagcttaattgctattaggcacgccattgttgaaaaaagaaaaagcttgatgcgtgatcctgcactgtttaagctgacttaagataattatttactccacacattgctttaatcctgctgagttttttatagcatttaaaattttgtaggtaaaaagccaagggatttgttaaatccaaaggctgtcaagtccatgcagtcactttttgctatgaaggatactattggaaaaaaagaaactcgggaaattagcgcatcttttggggttactgttacacaggtcagctacttatctcgcatgtgctatgctttttaccttgatgtatgcctatttatgtggtcttatcacttgctttttatggttcgttgaagaaatccatccttaaacagttaaaataatcatatacagctgaacagaaaacatataactgatttcaagctttaacagaatattgtcctttcccttttcttatagttggtggtctattactttttcctttatcttttctaagttagttttcatattattttattagcctcaatgtgttggcatgttgccttctatttaaaattaataatattattctgattttatttctatgtaattctttttatattgatgacctgcaactcaatggctcctaggtgagggagttctttgcaagtcaacgtacgcgagtaagaaaatttgttcgcttatcacgtgagaaagccctgagaatagagtcatccaaggctcctgacaatgtatgctccataagcactgagcagacacctgttgacattgaggcacatgctcaagttattgagcctctgagaacattagaaccattggaggcgcaacaaatttctttgccgcatctggtggttcctcaaatctctttacaattgccggtggtcctgcagagctgtgcaatccctgttgccccaataggtgtaatgcaacccaccgaggctaagactaatcccgatcccattcaaaaggaaactaagcaagaggaagttgctggagttgagtcagaagataagaagtttttggaaagtatctttgttctaatgcggaaggagaatacattctctggacaggtcaaattgatggaatcaattctacaaataaacaatgtaactgttcttagttggtaagatcccgaccttatattacatacagagcattagatgattttattggtccctaatttacttttctaataactttgcaggttcttaacaatgggtggtttggccattgtatcgacgtggttgggccaagcagttactgaggagcaaacaacagttattcttgttgttttcaaggttcttatttttctgtaactgtacattgtcacatctgtgtcaagctttttttttacttatggtctaattgatgtaggtgcttcttcatctcccattacataaagctctgccagctcatatgtcaactgtattgcaaactattaacaggttgcggttttataggacacaaggtgtgtagaaattgccgaaagtctttaattatcttgcacatatattttggatgataatataattgccatgagaagtaccttggattattataaacttggaattctagcaaagaaggatagcgatgctagtgaataatttttttaatgatgttcctacttacaaaatcgaaattatggttgtgaacattctgctatgattgtttgagctatagctgataagccgtggaaaaatgaaaaccaaccaaagataatttatggataaaatttttgtgttattagcgtttaaaagccaaagctggaaaatagactatgatgaaaaaaaataatcccataatcaactctcaaaagttcaattttttaggctggatttgatccgaaggccataaaaactcaaaaaaaagacctttttttttcaaaaaaacaatttatgcttattttttgggagaaattgtaagtcagcatgtggtttttggacactgtaatgttctgcaaagttgaacattaatagattctcttagtttctttgggctgcttactagaatttatctgatttgaagatcagacatatcaagcaaggcgaggaacctcctctccaggttgagcaaagtgcttgtaagaagtcaggcattgaagaaatctcagaaggacttaatctgtaaacaaaggtggattcctcttttgcagcgctgttattatcctattatcctattatttttactgccttttctctgctgaattttacttatagttaatttattttctattttcaggataagtgaaattctccgtgatgagtcttggaaatctgaagttgatattactgtaagtatctgagggagaatacaatatcaagtatccattgtcaaattagcaatatatatcagagtattaaaatgcttagcaaaataacaagtttaattgttttgcccttatcaggaggacatccttgccttgactgatgatgcaagtgagagcaggtgattttcgttatgtttcatgcattgaataaatttaaagtttattaatattaagtgatctacttaatctctattttcgcctgctatacaattcacttgatttggtttatgtgtcactttgcagaatgcctgagcccagaaaaacgccattgctgctcactgcttctgcggacgaatcaaataaaaagagttctctgcagacaagtatcctttcattttatttaagcctgccactactaaattttgcttctcttctcttggaacatttgaccacattttcccatctgcataaggctattaaagtgtttgtattccaaatttcctatcatatatatatctataagccttctccctagaaaatactgacagtttattgttctgtactaccatttgggtaacatttattggtaggtttcattattttacatcaatcatagaaaggggctccttatgcaacttgcttttttttttcattttttgcccaaatgttctatgccttgttgacatgggtgttactaatggcttctttatctctctattgagtttagtcaggctacatgctcctttaaactatttggtgcttttatttgttgttttaacctgcatttattgcatgttcgatgaatattagtgaacaatgtgcatgtgaggagttcaatacctggcatcttcaatttgttgttttcaattgttaattcaactgcttgtgaatctccttagctaatcccttcagaatccaaagagaaaaggaaagttctacttgtagaacatccaaatcggaaagctgctggcaagaatgttaaccctgtcagaagcacatctacgaacaatagtagaccgttatctgcagatgatatccaaaaagcaaagatgcgtgccatgttcatgcaggagaaatatggcaaggttgacacaagcaaagtgattgaaaaacctcatatgatggaaattcaaaaaccgtctggcttagttgattcaaatgtaccgcttgtgcccagaacccctcttacttcaatcattaaacaacctgttgaccctagcccatcaacctctaaacaaagtacactatctccacctgataagccagaaattgcagttagcttgaagctgaacgtaacagccaaagaaaactttatagagaaattggattccaagagagttatttggcagataccaccaggtataccctttttcttctctgcttcttcatgtgtccatcttttaatagaagttgtataatagatgtaatggttcatatcttaagaacttgaagcgtgttgtcttttatttgtaccaacacaagcctctgaaatctgtatagtttagattatgagattatccaaaatcagtatatagtatggatcaggttcaatctgaagtggagaaaccgcaactcgagagacataccgtgttatagaaccaggtcatgagctctgttttgtttgtcctcatgtcaccagttgtacaatgcagtcttaacactaaacaacgtatctaatttgttgtcatgaatttgatgcatgtgtgagagcctaaagggcaggtgatcaagtggatgatttctgacagagataactgttactacttgatttagcagttggtttacaattaaccgattcagcttggaacaagcatcctgctatcaaattgttggaagagcaggggatggcaattttctgtagtgatatgagaattgagaagttaccagtcattccccataaacaaacatggggcagctattaccataatttcaggcagttcattgcaacagttcctctttttgtaggaaggcttgcaagtaaatccacattggttaaatacttggaccaaataatttctgtgcttatggatctcaataaacactaacatgcatgacgttacattttatacttcatgtaatttgagttccatacattcatgtgataaaaatcacttattacaggttatttgatactttctgtagcaatatcgataaaacaatgacaaatcagctggtctgtgtgagacttattttcctttattaattctctacaaatccaaatgtgatatctgcatatggtatgttgactgggaaaagatatccagagatacttccaatctctatggtgtcagcagttgtcagtgaacatctgatctagctatcttaagaacttcgcttaaatacagggaactctgcgaacatccaacagtcgtgtgtcacccgttgccgatcttgaaaagttttagttcacttcaccatctatgttttcttagagttccagtgaaagcttgagcttgcattattagttcatagcctcatgttgcagaactttatttttttcccctggagttagcctcatgttccttccttaagtgtgacatatgcactatcagtttatttattcatttttttttagaatcggggctttatttgtccattatttgaaattttgttatttcatgttgcagaggtttggatagaccctgcttggagtttaggtgctggagagaacagcaaagaatttgaggtccaaacccagagaaacaggcgtgagaaggaaaccttttatgctagtctaaaggacataccgttgaatccaaagggcccatgggatgtggaaatggactttgatgacagccttacaccggaaattccaattgagcagccaccagatgctgacgctatggaaacggatagcgtgagcacagcccctccaaacattgtggttcctgttgtggacaagcaaataggatcaacctcatcagtatctccagcagttgctgctggtgcgaacggtgcaacttctgaaccagatcttgagctgcttgcggtgctgctcaagaatccacaacttgtctttgctctaacttctaatcagggtgggaccctgccaagtgagcagaccgttgcacttctggacatgttgaagcagactggccttggactatcagagctggtaaatagcctggccaacaattctggggtccaaaaagagcccgaatctggtcctgaagctatccctgcttcgcttccatcgccaactcctccaaaagacctgatagccagggtttgcctgcttaactcttcacttctaattttccaaagttaaatccttcatctgttgtaagtattactatcttgtttggcaggatggctggagttcagagttcccatcacaagtgaggacccaaaacttgcagcacgcccatttgccaaacagagcaaatgcacctcctgttgcaagcagcgtgcagcaaagtttctcaaatgttgtcagttcgttgccttcacaaccttatgcttcagcttctgctttgccggcacagactcgaactaatatgacatctctcccccagtcgatgatctccgtaaatccgtcaactcaacatgttgctcctatgaataatcttctgagcagagccacggtacaccagcacacccaatcatatgctttaacgtctgatcctgttgcagtggcggtccatcatcagccagcggtgaacaaactagcccatgaggttcagagcatctcacaccctgctgtatcacattcttcggtggctgaatcacatgcctcttacacatcatacacctggcaatctagtgttgctaccattgccgccactgggcgaaatgctacacctgatcgatgggctgcacctgcacgcactactaattcctttaacgctgccccatcaaattcaaaccatgtgacgtatcctaaccagaatgcttacagtaaccacagcacacaagctactacatacaattcttatggttcagctccagtctcgtcccactccctccacccagggcagggactggaccgaaatggctacactcacgcagcggagtaccagacgacaatggcgcgagacgccctatggcggaactcgcggtctcctgagcttggtgctggtgctgtgtatggtagtagctcacaaggctatgttcccgagccctcaaggcagtggaactacgggcagcagagctacaatcctgagccttattctaggcagtggagttctgggcaacaaagctacaacactgtcactgctgagccttccaggcagtggagctccgggcagcagagctacagcaacccagctgagccttcaaggcagtggagttcatcagcacatgcacaaccaagctacaaccctgagccttcaagaccctggaattcaggtcatcagagtcaaaaccctgaggcatcgaggcaatggagtcatcatcatggaaagcaagaacgttataatccgacagatggtagaaattcttatgatcaacattggaggagatgatgagggtcaccattgtatattagctgattcttgaggtggttctccgggcttttttttcccttttttttttttctttttgatgggaagctttgtgattcgtttactttgggccttgtgattggcacagaggccattgagaaagctatacatcatgtaccaaatgtagtaggagtgggggaaacaaaaaacgagaaaactaaaaaaaaaaaagagaggatgcatcagctgaattgctgaatccattgatggataaaaagtttcacttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0934300, RefSeq:Os01g0934300