Os01g0935400

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0935400| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001051854.2 GI:297598266 GeneID:4326792| Length = 1789 ...")
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Gene Name

Os01g0935400

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001051854.2 GI:297598266 GeneID:4326792

Length

1789 bp

Definition

Oryza sativa Japonica Group Os01g0935400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42851916..42853704

Sequence Coding Region

42852132..42852702,42852929..42853176,42853375..42853656

Expression

GEO Profiles:Os01g0935400

Genome Context

<gbrowseImage1> name=NC_008394:42851916..42853704 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42851916..42853704 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattctggtgctgctgccgtctgcgcggagaaggcgagtgagatcatcaagatcggtcaggttgatgacgtgcaggagctgcagcgacgactgtgctccgccaccaccgtgccggagcggtacatcagggacggcgacgaccggccggatcacgccgtcgtcgacgacgagcgcgcgcaggagcggattccggtgatcgacgtcggcgagctgcagcgcggcagcgaggacgagctcgacaacctcaggctcgcctgcgagcagtggggcttcttccaggttgtgaaccatggagtggaggaggagacgatggaggagatggagaaggcggcgagggagttcttcatgctgccgctggaggagaaggagaagtaccccatggagcccggcggcatccagggctacggccacgccttcgtcttctccgacgaccagaagctcgactggtgcaacatgctcgccctcggcgtcgagcccgccttcatccgccgccccaacctctggccgacaactccggccaactttagtaagacgctggagaagtactcggtggagatcagggagctgtgcgtgcggctgctggagcacatcgcggcggcgctggggctggcgccggcgaggctgaacgggatgttcggggaggcggtgcaggcggtgaggatgaacttctacccgccgtgcccgcggccggagctggtgctggggctgagcccgcactccgacggcagcgcggtcaccgtgctccagcaggacgcggcgttcgccgggctgcaggtgctccggggcggcggcggctgggtggccgtccatcccgtccccggcgccctcgtcgtcaacgtcggcgacacgctcgaggtgctcaccaatggcaggtacaagagcgtggagcaccgggcggtggccagcggcgagcacgaccgcatgtccgtcgtcaccttctacgcgccggcgtacgacgtcgagctcggcccgctgccggagctcgtcgccgacggggagccgcgcaggtaccggacgtacaaccacggcgagtacagccggcactacgtcaccagccggctccagggcaagaagacgcttgaatttgcaaagatttaa</cdnaseq>

Protein Sequence

<aaseq>MDSGAAAVCAEKASEIIKIGQVDDVQELQRRLCSATTVPERYIR DGDDRPDHAVVDDERAQERIPVIDVGELQRGSEDELDNLRLACEQWGFFQVVNHGVEE ETMEEMEKAAREFFMLPLEEKEKYPMEPGGIQGYGHAFVFSDDQKLDWCNMLALGVEP AFIRRPNLWPTTPANFSKTLEKYSVEIRELCVRLLEHIAAALGLAPARLNGMFGEAVQ AVRMNFYPPCPRPELVLGLSPHSDGSAVTVLQQDAAFAGLQVLRGGGGWVAVHPVPGA LVVNVGDTLEVLTNGRYKSVEHRAVASGEHDRMSVVTFYAPAYDVELGPLPELVADGE PRRYRTYNHGEYSRHYVTSRLQGKKTLEFAKI</aaseq>

Gene Sequence

<dnaseqindica>1003..1573#529..776#49..330#gagtttggagtagggcatagattcttggagaactgggcaaattttggcatggattctggtgctgctgccgtctgcgcggagaaggcgagtgagatcatcaagatcggtcaggttgatgacgtgcaggagctgcagcgacgactgtgctccgccaccaccgtgccggagcggtacatcagggacggcgacgaccggccggatcacgccgtcgtcgacgacgagcgcgcgcaggagcggattccggtgatcgacgtcggcgagctgcagcgcggcagcgaggacgagctcgacaacctcaggctcgcctgcgagcagtggggcttcttccaggtaattaacactacgagtttatttttttaaacgacttgcacaagaagtgcgaatttctattgatatagcagaaaaaaattaagattatatttctgaagattataaccaggaaaacgaaaaattatacctccaccactacaagtttattgattaattagctagctagattgtgtttgggaatgatttaattggttgtaggttgtgaaccatggagtggaggaggagacgatggaggagatggagaaggcggcgagggagttcttcatgctgccgctggaggagaaggagaagtaccccatggagcccggcggcatccagggctacggccacgccttcgtcttctccgacgaccagaagctcgactggtgcaacatgctcgccctcggcgtcgagcccgccttcatccgccgccccaacctctggccgacaactccggccaactttaggtaacagcttctccctccatccgttttatttaatgccgttaacttttttaattaaacatatttaaccgttcatcttatttaaaaacttttgtgaaatatataaaattatatgtataataaaagtatatttaaccctaaatcaaataatagaaaaaaaataataattaattaatttttttaataagacaaagggttaaacatgttttaatggcgatctcgagtgcagtaagacgctggagaagtactcggtggagatcagggagctgtgcgtgcggctgctggagcacatcgcggcggcgctggggctggcgccggcgaggctgaacgggatgttcggggaggcggtgcaggcggtgaggatgaacttctacccgccgtgcccgcggccggagctggtgctggggctgagcccgcactccgacggcagcgcggtcaccgtgctccagcaggacgcggcgttcgccgggctgcaggtgctccggggcggcggcggctgggtggccgtccatcccgtccccggcgccctcgtcgtcaacgtcggcgacacgctcgaggtgctcaccaatggcaggtacaagagcgtggagcaccgggcggtggccagcggcgagcacgaccgcatgtccgtcgtcaccttctacgcgccggcgtacgacgtcgagctcggcccgctgccggagctcgtcgccgacggggagccgcgcaggtaccggacgtacaaccacggcgagtacagccggcactacgtcaccagccggctccagggcaagaagacgcttgaatttgcaaagatttaagttgatcgattgatcaccgagtaattcagtataattaatcaacctaaaaagatcaattatgttgacacaatacttgcgtttgagttattgtttatgataatctgaagtatactaatgttactatactctgaagtctgaagaagtattgtactatgtctggtgtatgtactagtattccacaaaaatggacaagcataatttgaacgattttcataa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0935400, RefSeq:Os01g0935400