Os01g0936200

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0936200| Description = Lipase, class 3 family protein| Version = NM_001051862.1 GI:115442094 GeneID:4326524| Length = 4559 bp| Definition ...")
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Gene Name

Os01g0936200

Description

Lipase, class 3 family protein

Version

NM_001051862.1 GI:115442094 GeneID:4326524

Length

4559 bp

Definition

Oryza sativa Japonica Group Os01g0936200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42895343..42899901

Sequence Coding Region

42897643..42897822,42897900..42897972,42898179..42898246,42898335..42898382,42898500..42898565
,42898692..42898774,42899488..42899554

Expression

GEO Profiles:Os01g0936200

Genome Context

<gbrowseImage1> name=NC_008394:42895343..42899901 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42895343..42899901 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcgccgcgggctactaaaggcggcgcttttggtgtgcttgattgtgctttgctccgggagagaaattcaggtcattcaacgccatccctctaccaccatatataacccaaagcttgccaagacacttgtggaatatgcttcagctatctatactgctgacctgacacaattgtttacatggacatgtgctagatgtggtgacctgattgaggggtttgaaatgatggatatcatcgtagatgtggagaactgcttgcaggcatatgtaggttttgcaagtgatatcaatgctatagtagttgtatttagaggaactcaagagaacagcattcagaactggatagaggacttgctatggaaacaacttgatcttgactaccctggtatgcctgaagcaatggtacaccgaggattttattctgcttatcataacacaacaatgcgagatggagttgtcagcggtattcagaagactcgaaaattgtttggagatgttccgatcatggtaacagggcattcaatgggtggagctatggcttcgttttgtgcacttgatcttgttgtgagtactgcatcttaa</cdnaseq>

Protein Sequence

<aaseq>MERRGLLKAALLVCLIVLCSGREIQVIQRHPSTTIYNPKLAKTL VEYASAIYTADLTQLFTWTCARCGDLIEGFEMMDIIVDVENCLQAYVGFASDINAIVV VFRGTQENSIQNWIEDLLWKQLDLDYPGMPEAMVHRGFYSAYHNTTMRDGVVSGIQKT RKLFGDVPIMVTGHSMGGAMASFCALDLVVSTAS</aaseq>

Gene Sequence

<dnaseqindica>2080..2259#1930..2002#1656..1723#1520..1567#1337..1402#1128..1210#348..414#gttccctcttctcgctccttaatttaatctttaattaatttatttctcgcctctcttaacttattttgctcctcacttttcttcactagctcaaacacttacacgaactcggattgttaataatcttttactactcctatatacggcaataaaatcttcgatttcatcgattggtcgccactctccgattccccccaactcgtcggtagcaggtagctcgatcgcgcggcggcagaatttccggggtggatttggccgatttggggcatcaggtgagttgatttgtgcaaattttgccaagatttgccatgggcgcttggttatttctctctcttttttggtagggcatggagcgccgcgggctactaaaggcggcgcttttggtgtgcttgattgtgctttgctccgggagaggtgggtaatttagctcccttttttacttcaaaatgttgtagtggattccttcctgcttgcatttagagctggtcttttttgcttgattacgttttagcttgctgctagatggaaatatattgggaaatcttcaaacaaataatttgcatagaactaacttaaccgttttttgttgaaaaaaatgattaacgggagaattgttcacattgggcaaggaaactagcagtgaaccacaatatttgcatgcctcgatgttttccccctttgtagtgcctactagtatattgaaacagtatgatagtttctttttccatttttttactagtataaaattaccttctttcaatttaatctttctggttaaaatggctggttgtagctgtatctagttgccattggtactatgatatatagtgcaaaatttcaaattccttttgacatatcaaaaggctattacagaagaactataagggttctttcatgcagctttttattcaaagctgttgcatatcctcttcgactttgaatccaaaagtttagctgttacaataatgtgttttttttcttttttgtttcatgttacataatcattttctgtcactagttatatcttttctacatgtatccagcatgttgaatgttgcttcgctagatgttcattgttttcctttttaaaaggctgatgctggttcttttacatttggtgaaaaaagaaattcaggtcattcaacgccatccctctaccaccatatataacccaaagcttgccaagacacttgtggaatatgcttcagctgtatgttcattcacctttttctttatctaagttattcctgaatgttagatcatccttcaatatggatcaaccgtttgcaacacgttttctaatattttggagtttaacatagaggatgtcctgcagatctatactgctgacctgacacaattgtttacatggacatgtgctagatgtggtgacctgattgaggtaatcctttatcactggtatactttctgtttgccatgacatgattttgtttgacttttgggcaacttcctgcaattcttggcacggatgattgaagtaaatttgttggatgcccaggggtttgaaatgatggatatcatcgtagatgtggagaactgcttgcaggttcgtttctgcctgtgtacatcataacacttatcttcatgtctctagtagcatcttgtatgttgataatattttaacaaatgtgcaggcatatgtaggttttgcaagtgatatcaatgctatagtagttgtatttagaggaactcaagagaacaggtaattatcgtctgtttcgttttgcttgcttactgaaatttctttttgattttgatcgttctattacttataagggtattctgttgtgtattttggtttcatgtgtgcatacttcacatttataaagtacttgacctctattctaggtactctcttaatttaataaagtacttactttaatctgtactgatccttcaatttcgcagcattcagaactggatagaggacttgctatggaaacaacttgatcttgactaccctggtatgcctgaagcaatggtgagcaatgttagcttcagcattatgagttgcaacattggcagaccaaattcattttgtgctccacctcaccataggtacaccgaggattttattctgcttatcataacacaacaatgcgagatggagttgtcagcggtattcagaagactcgaaaattgtttggagatgttccgatcatggtaacagggcattcaatgggtggagctatggcttcgttttgtgcacttgatcttgttgtgagtactgcatcttaactgaattcaatagtgttcacttttagctcctatatcactttctgtttagaaaattacaccacatattgtttctctgcttagttttgtgcaataaattataaacattttattctccacatctgacttcacataaaagagagaagtgttttattttgttggaatttggaaacaccttcttccatgataatactttatattctggtcaaatggacaaatagtctgcgaagctgtcgagcctttttatcttcttggagccgatctttcatctttcctttgccagcctagtactaattttcagttatgtagtagcaatctacatctatggtcggtttgtaggtttccattccttacttacagtggcggagccaggatttctcgaagcctagggctcaaaactaaatactaagctatggtcatttccgatgttagaatgatatttttagcggtacgagaaacaagaaagcttattagtgtatgattgattaagtattgactattataaacttaaaatatatatttatttatatatttagagaaacttctatattgaaaacttttgtatgagaaacactatttagtaattcaaaaaacatgcacatgataaataagacattttttcagcccaaactcacttaagaactcagcctaaagctacccaaaattcctatataatatctctgttttcaaaatatagcaatttttagttacgaatctaacatagaattgtctggattcaacacttgtccagattcgtaactaaaaatttgttatattataaaatagagggagtacgttaggtgggctattatatattctcgacctcgtaggatagagcacgaggtgttcctacagataggcatatttagcaaatgtatcacctaatgctatcatagaatgaggttttgtttgtagaattgttgggatacatgcctcctttgccggtccaaagaagtatagtagtagtatggactagagagttcggcaattaaaataggcctccaagtaatggtagtgagggatagaatcgatctaagtcccaggctggagtatacgcgtagggctgagacatggaaggatcaaaatatctgttgaattttcaggtataagaccgttaaattttttcccacgcctggggctccagcccaagttgccccaggcgtggttccgcccctgcttacttacctccaggttttgcctctacagctaaacaggaattctgttttcttttaggtgaactatgggctagatggtgtgaagctaatgacatttgggcagcctcggattggcaatgctgcttttgcttcctttttcaagaaatacttgcctcacgcaatccgagttacccatggtcatgatatcgtgcctcacctgccaccatacttctcattcttcccacagaagacctaccatcatttcccaagagaggtacgatacactctacctgtctaatatgcttacctgaaactcaataccttgaaccatatatgcattttctgacgagatcaattgcttacagacagtacacatgcaatcttactcatcttgcatttccataatttcccaatgcatgatgcagtgctgagtgctccttttcaatatggttctatcaccttgacgtaatcgaccgagttcaataaaaatcctcttttttttatctaaaaaagatgctctttttcttcaggtatgggttcataacgtcggactaggaagcctagtgtactcggtagagcagatctgtgatgattctggtgaagacccatcgtgctgcaggtactacccctcttcttcttcttctccatatgcacaaacacaagcagatggggggtgaaccacacctcatcatctcctctccttttggtgaccctgaacctgatgagctcttcatgatctctctctttctttgacgccactttcacctttcaggtctgtgagtgggagcagcgtgcaagaccacatatactatctcggcgtcagcatgcacgccgaggcatggagctcctgcaggatcgtcatggactacagcaagctgcgttaccggatggacatcaatggcaacatcgtcttgtcaaagcatctgggtttgtcaggtgacctagaacacagtgaccaatgattcaaaatggaacagatttagtataatggtagcttagatgtgttatattattgtacagtactactacacgtgtgttcctctctctgatgctcatatgtgtcaaaattgttcatgcgtcagaagaggattgggagatgcttgctgtaaatgtggtttggtaatgtgaagcattgttcagttcacaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0936200, RefSeq:Os01g0936200