Os01g0936700

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0936700| Description = Conserved hypothetical protein| Version = NM_001051863.1 GI:115442096 GeneID:4326526| Length = 2770 bp| Definition ...")
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Gene Name

Os01g0936700

Description

Conserved hypothetical protein

Version

NM_001051863.1 GI:115442096 GeneID:4326526

Length

2770 bp

Definition

Oryza sativa Japonica Group Os01g0936700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42906936..42909705

Sequence Coding Region

42907143..42907339,42908306..42909638

Expression

GEO Profiles:Os01g0936700

Genome Context

<gbrowseImage1> name=NC_008394:42906936..42909705 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42906936..42909705 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttgcggtggctccaaagaagctgtggccaccggcaacaccgtcggctccaccggcggcagatccagccgccgcctcttccggcggaagtccagcgtcgtcgccgccgccaacgccgccccgtctcacgcgccgccgccgccgtccgacgagagctcggccgccgccgttgtcaaggaaagcagtgtcaacgaagaggtcaaggggaagggcaaggcgacgccgaaagagaaggccattgatgaggagaagaaggatgtcgaggagagcaccacggcggccgccgccgatgaggtcgtcgtcaaggacaccggcgtagtgatcgtcgagaagacgacgacggcggcggcggccaaggcgacgccggcggccgtgaagaagatcgtcgaggagaagaaaaaggaggaggccaagaacaaacaagaagctgtcaccgatgataagaagaaggagaaggtgattccgaccaaggtcgccattgatgagaagaaagaggatgtagtagtgccaatgaaggaggagttcgtcaaggagaaggagaagatcactgacgccaagaacgacgtcgcatcaaccgagaatgtcgccgccgtcgatgagaaaattaaagcagaggaggacaagaacaagaacaagaacgacgacgaggttgttgccacggcaacaatggaggcagccgtcgaggaggaagacgacgacgaggcggcattagccgaggacgacgacgacgacgacgacgacgagcagcccaacgacgacgaaagcatcaccttcgcggttgcccccgtcgccgaggacgacgaaggcagcgtcaccttccccggcgcccgtgcccggccggtcgtcgccaacgccgacgaggttcatcaggaggatgacgtcactagtgtcacctcgccgacgactgccccggccaccctggagaatgacaccagtagtagcgccgccgccgccttcccggccgctgtcccggcgccggtggccggcgaggaggtagcacaactagagcaacctagctcttctaagtccaacaatggcgaaatggaggcggtggccggagttgatcaggcagaagatgccaagaaggagacaagcaacattgaggcgatcaatgtcgaacaggaggagatcaaggtcgaggaggaggaggagaagatcatcgtctcacaggagacagaggaggaggaggagaaatccgctgtcatttcgagagatgagatcaccaaggtcgaagtcgaacgcgaggagatcaaggtcgaacacgaggagatcatcgtctcccaggagacagaggaggagaaatccattgccgtttcgaaagatgacgatgggcaatcagatgggaaacaaacaattgaattgaaggaggccatgacagcaacaaaaacggatgaaaaaggagaggagcaggtcgctaaggataaaaaggatgacgaacaagaacaacaagccaccgccgctccaattgagtcgccgaaacaagaacaacaagccaccgccgatccaattgaagcaccgctgaattga</cdnaseq>

Protein Sequence

<aaseq>MGCGGSKEAVATGNTVGSTGGRSSRRLFRRKSSVVAAANAAPSH APPPPSDESSAAAVVKESSVNEEVKGKGKATPKEKAIDEEKKDVEESTTAAAADEVVV KDTGVVIVEKTTTAAAAKATPAAVKKIVEEKKKEEAKNKQEAVTDDKKKEKVIPTKVA IDEKKEDVVVPMKEEFVKEKEKITDAKNDVASTENVAAVDEKIKAEEDKNKNKNDDEV VATATMEAAVEEEDDDEAALAEDDDDDDDDEQPNDDESITFAVAPVAEDDEGSVTFPG ARARPVVANADEVHQEDDVTSVTSPTTAPATLENDTSSSAAAAFPAAVPAPVAGEEVA QLEQPSSSKSNNGEMEAVAGVDQAEDAKKETSNIEAINVEQEEIKVEEEEEKIIVSQE TEEEEEKSAVISRDEITKVEVEREEIKVEHEEIIVSQETEEEKSIAVSKDDDGQSDGK QTIELKEAMTATKTDEKGEEQVAKDKKDDEQEQQATAAPIESPKQEQQATADPIEAPL N</aaseq>

Gene Sequence

<dnaseqindica>2367..2563#68..1400#ctacattctctcctcgccgtcgtctcctcctcctcctcctcctccacatcgccggccggccgccgccatgggttgcggtggctccaaagaagctgtggccaccggcaacaccgtcggctccaccggcggcagatccagccgccgcctcttccggcggaagtccagcgtcgtcgccgccgccaacgccgccccgtctcacgcgccgccgccgccgtccgacgagagctcggccgccgccgttgtcaaggaaagcagtgtcaacgaagaggtcaaggggaagggcaaggcgacgccgaaagagaaggccattgatgaggagaagaaggatgtcgaggagagcaccacggcggccgccgccgatgaggtcgtcgtcaaggacaccggcgtagtgatcgtcgagaagacgacgacggcggcggcggccaaggcgacgccggcggccgtgaagaagatcgtcgaggagaagaaaaaggaggaggccaagaacaaacaagaagctgtcaccgatgataagaagaaggagaaggtgattccgaccaaggtcgccattgatgagaagaaagaggatgtagtagtgccaatgaaggaggagttcgtcaaggagaaggagaagatcactgacgccaagaacgacgtcgcatcaaccgagaatgtcgccgccgtcgatgagaaaattaaagcagaggaggacaagaacaagaacaagaacgacgacgaggttgttgccacggcaacaatggaggcagccgtcgaggaggaagacgacgacgaggcggcattagccgaggacgacgacgacgacgacgacgacgagcagcccaacgacgacgaaagcatcaccttcgcggttgcccccgtcgccgaggacgacgaaggcagcgtcaccttccccggcgcccgtgcccggccggtcgtcgccaacgccgacgaggttcatcaggaggatgacgtcactagtgtcacctcgccgacgactgccccggccaccctggagaatgacaccagtagtagcgccgccgccgccttcccggccgctgtcccggcgccggtggccggcgaggaggtagcacaactagagcaacctagctcttctaagtccaacaatggcgaaatggaggcggtggccggagttgatcaggcagaagatgccaagaaggagacaagcaacattgaggcgatcaatgtcgaacaggaggagatcaaggtcgaggaggaggaggagaagatcatcgtctcacaggagacagaggaggaggaggagaaatccgctgtcatttcgagagatgagatcaccaaggtcgaagtcgaacgcgaggagatcaaggtcgaacacgaggagatcatcgtctcccaggagacagaggaggagaaatccattgccgtttcgaaagatgacgatggtaaggttcagagggaatgtccctagatgtttgcatgacgtataaataatataaatttttttaaaaaaataacatagattaatatgaaatatatcactccacaaacatacaaggccaaattcgatttctacaaattgcaataaaaataacaaattaaattaaaaatagttatcattaattatttttgttacaacatgtagaagttgaattttaacatgcacttttgtgaagtgttatatttcatattaatttatcttgtaattttttaaaaaaaataataactatttaggtggcatgcatgaaacaaggagatatcgcctgagggatgaaaacactttttcaatttagtttctttgattgctaaacattacacgcacaaggactatttatctaaaaataataatctgaaatttcctgcctcccgttaaatatgacattcttaactatattttggttgaaatttcaaaactttgatcatccacacttatttagtttaaaaattgagatcatacaggtaaaatttttatttagaattacttttaaaacattatgattttaatagatcatattattatattctaatacttagaaaatagtggtcaaagttgtgcaccaaggactgcataaaatcaacagtgttatatatatctaataatctaaatacgaaggtagcagctcaaaaaaaaaaaaccgaaggtagcacatgcacatgctattatctcatctattgtgtttatcaaaatcaggggacccaacgatcattattcttcttttgcatcttttctaatcattttgtctctaacaacattattccttacatccagtgatctaggcatgcttgcataaattgcaatctataattctgctgatctgttttcctttaaaaataaaaaagagatgaactttatcagctgccgatttcaactgctcacataatactcctagacgttcccattccatgtgcagggcaatcagatgggaaacaaacaattgaattgaaggaggccatgacagcaacaaaaacggatgaaaaaggagaggagcaggtcgctaaggataaaaaggatgacgaacaagaacaacaagccaccgccgctccaattgagtcgccgaaacaagaacaacaagccaccgccgatccaattgaagcaccgctgaattgaaatttgaaaatgagacgcatcgtaccaaacaaaatgcattgctgcatgcctccacgaaatgtccaaattttctcccttcagtttattagcaagaaactgtacatgatgcttatctgttcttgttggttaaatacttcatcttcaactgagatgatgactgctagtttgtgcaatttcgagtatttaacgttgattagcatgtgctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0936700, RefSeq:Os01g0936700