Os01g0937000

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0937000| Description = Peptidase A1, pepsin family protein| Version = NM_001051866.1 GI:115442102 GeneID:4326529| Length = 1405 bp| Defini...")
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Gene Name

Os01g0937000

Description

Peptidase A1, pepsin family protein

Version

NM_001051866.1 GI:115442102 GeneID:4326529

Length

1405 bp

Definition

Oryza sativa Japonica Group Os01g0937000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42928347..42929751

Sequence Coding Region

42928562..42929749

Expression

GEO Profiles:Os01g0937000

Genome Context

<gbrowseImage1> name=NC_008394:42928347..42929751 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42928347..42929751 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acgctggcaagcggcggcggcggcaagcccctcgtcacggccgtcaccaaggacggcgccaccaagctctacaccatcgccgtcaaggacggccaccccctcgccctcgacctctccggcgagctcgtctggtcgacctgcgacgcctcccactccaccgtcctcccctacgagcgcgagtgcgtggaggccaaccactacacgccgccgagctgctggatgcagtacggcggcgccggcggcgactaccgctacggcaacaaatgcacggcgcacccgtacaacggtgtcaccgggaggtgcgcgccgggggacctgacgcgcacggcgctcgccgcggacgccaccaacggcagcaacccgctctacccggtcaccttcccggccgtcgcctcctgcgcgccgggctccctcctcgcctcgctccccgccggcgccgtcggcgtcgccggtctcgggcgatccgacctcgcgctgcacgcgcaggtcgcggcgacgcagaacgtcgccaagaagttcgcgctctgcctcccgagcgtcgccgtcttcggcggcggcccgttcgtcctcatcttcccctactcgcggccggacatcatgcagaagctgtcctacaccgcgctccgccgcagcccggagctcgccggcggcaatggcggcgggtactacatcacggccaagagcatcgaggtgaaccaccaccaggtgccactacccaaccacggggcgccactcgtcgtccagctgagctccatggttccgtacaccgagctccgccccgacgtgtacggcccgttcgtcaaggcgtgggacgagatcctgcaatggccgaagaaggtggcgccgccggtggcgccgttcgagctgtgctacgagagccggacgatcggctcgaaccggctcggctacgccgtgccggacatcaacatcaacctcgaggacggcgcggcgtggtacatcttcggcggcaactcgctggtgcaggtggacgacgccacggcgtgcttcgcgttcgtcgagatgaggccggagaaggtcgggtacggcccggcggtggtgatcggcgggcaccagatggagcacaacctggtggtgttcgacgaggagaagcagcagctcggcttcagtggcctcctctttgggctccagaccacctgcagcaacttcaacttcactgtcgctgcctaa</cdnaseq>

Protein Sequence

<aaseq>TLASGGGGKPLVTAVTKDGATKLYTIAVKDGHPLALDLSGELVW STCDASHSTVLPYERECVEANHYTPPSCWMQYGGAGGDYRYGNKCTAHPYNGVTGRCA PGDLTRTALAADATNGSNPLYPVTFPAVASCAPGSLLASLPAGAVGVAGLGRSDLALH AQVAATQNVAKKFALCLPSVAVFGGGPFVLIFPYSRPDIMQKLSYTALRRSPELAGGN GGGYYITAKSIEVNHHQVPLPNHGAPLVVQLSSMVPYTELRPDVYGPFVKAWDEILQW PKKVAPPVAPFELCYESRTIGSNRLGYAVPDININLEDGAAWYIFGGNSLVQVDDATA CFAFVEMRPEKVGYGPAVVIGGHQMEHNLVVFDEEKQQLGFSGLLFGLQTTCSNFNFT VAA</aaseq>

Gene Sequence

<dnaseqindica>3..1190#acacgctggcaagcggcggcggcggcaagcccctcgtcacggccgtcaccaaggacggcgccaccaagctctacaccatcgccgtcaaggacggccaccccctcgccctcgacctctccggcgagctcgtctggtcgacctgcgacgcctcccactccaccgtcctcccctacgagcgcgagtgcgtggaggccaaccactacacgccgccgagctgctggatgcagtacggcggcgccggcggcgactaccgctacggcaacaaatgcacggcgcacccgtacaacggtgtcaccgggaggtgcgcgccgggggacctgacgcgcacggcgctcgccgcggacgccaccaacggcagcaacccgctctacccggtcaccttcccggccgtcgcctcctgcgcgccgggctccctcctcgcctcgctccccgccggcgccgtcggcgtcgccggtctcgggcgatccgacctcgcgctgcacgcgcaggtcgcggcgacgcagaacgtcgccaagaagttcgcgctctgcctcccgagcgtcgccgtcttcggcggcggcccgttcgtcctcatcttcccctactcgcggccggacatcatgcagaagctgtcctacaccgcgctccgccgcagcccggagctcgccggcggcaatggcggcgggtactacatcacggccaagagcatcgaggtgaaccaccaccaggtgccactacccaaccacggggcgccactcgtcgtccagctgagctccatggttccgtacaccgagctccgccccgacgtgtacggcccgttcgtcaaggcgtgggacgagatcctgcaatggccgaagaaggtggcgccgccggtggcgccgttcgagctgtgctacgagagccggacgatcggctcgaaccggctcggctacgccgtgccggacatcaacatcaacctcgaggacggcgcggcgtggtacatcttcggcggcaactcgctggtgcaggtggacgacgccacggcgtgcttcgcgttcgtcgagatgaggccggagaaggtcgggtacggcccggcggtggtgatcggcgggcaccagatggagcacaacctggtggtgttcgacgaggagaagcagcagctcggcttcagtggcctcctctttgggctccagaccacctgcagcaacttcaacttcactgtcgctgcctaatggtttacagttagtacatagttagtactaaaattgaataagagaaccatgtgtccactgtgatcggccctctagcaagaacttaagttatagaggtcatagattgttgtgagccatttacttgagttatggaggtcgtgctggtttgcatggatcaagattcattgcgatttttcctatcagataaaattcaatgcgatttcgtatttgctcat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0937000, RefSeq:Os01g0937000