Os01g0937100

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0937100| Description = Similar to Xylanase inhibitor precursor (Xylanase inhibitor TAXI-I)| Version = NM_001051867.1 GI:115442104 GeneID:432...")
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Gene Name

Os01g0937100

Description

Similar to Xylanase inhibitor precursor (Xylanase inhibitor TAXI-I)

Version

NM_001051867.1 GI:115442104 GeneID:4326530

Length

1404 bp

Definition

Oryza sativa Japonica Group Os01g0937100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42936860..42938263

Sequence Coding Region

42936992..42938251

Expression

GEO Profiles:Os01g0937100

Genome Context

<gbrowseImage1> name=NC_008394:42936860..42938263 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42936860..42938263 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccacgaaacggcaacctcgtcctcgccgccgccgccgccgcgctgctcgtgctgctggcgtcgccgccgtcgtgctccgccgcggcgcctcgtcgtcgggaccccgtggtggttcccgtcaccagggacccggccacctcgctctacaccatccccgtcaggtactacgacaacctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgcgccgccgaccacctgccggcgtcgctgtcctgccaggacccgacgtgcgtggtcgccaacgcgtaccgtgctccgacctgcaaggtcaccggcggcggcggcgactgcagcaagaacgtgtgcacggcgtacccgtacaacccggtgaccgggcagtgcgccgccgggaaccttgcccacacgaggttcatcgccaacaccaccgacggcaagaaccctctgatccaggtctccgtcaaggccgtggcggcgtgcgcgcccaagaggctcctggcgcggctgccgcgcggcgccacgggcgtcgccggcctcgccgcctccggcctcgcgctcccggcgcaggtcgcgtcgtcgcagggcgtcgccggcaggttcctcctctgcctcccgaggctcgggtacggccagggcgtggccatcttcggcggcggcccgatatacctcggcgaagggctgccggacttcacgacgacgctggactacaccccgctcgtcgccaagagagacaaccccggctactacgtcaccgccaacgccatcgccctcgatgacgcgcggctacccctcccgagcggcgcgctcgccgccggcggcgtggcgctgcgcaccgccgtgccgttcggccaactccggccggacgtgttccgcccgttcgtccgggagttcgagaagggcctgaaccggagcgacgcgaaggtcgccgccgtggcgccgttcccgctctgctacagggcgtcgatgctggggaacacgcggatcggctactttgtgccggcggtgaggctgatgctcgccggcgggaagaactacacgatgacggggaccaactcgatggtggacgtgaaggggggcaaggcgtgcctggccttcgtggagatgaagtccggcgacgccgccagttcgccggcggtgatcctcggagggttccagatggagaacatgttgctgcagttcgactcggagaagaagcggctcgggttcgcgaggctgccgttctacacgtcgtgcagtaacttcaatttcaccaagactcagtag</cdnaseq>

Protein Sequence

<aaseq>MPPRNGNLVLAAAAAALLVLLASPPSCSAAAPRRRDPVVVPVTR DPATSLYTIPVRYYDNLVVDLAGPLVWSTCAADHLPASLSCQDPTCVVANAYRAPTCK VTGGGGDCSKNVCTAYPYNPVTGQCAAGNLAHTRFIANTTDGKNPLIQVSVKAVAACA PKRLLARLPRGATGVAGLAASGLALPAQVASSQGVAGRFLLCLPRLGYGQGVAIFGGG PIYLGEGLPDFTTTLDYTPLVAKRDNPGYYVTANAIALDDARLPLPSGALAAGGVALR TAVPFGQLRPDVFRPFVREFEKGLNRSDAKVAAVAPFPLCYRASMLGNTRIGYFVPAV RLMLAGGKNYTMTGTNSMVDVKGGKACLAFVEMKSGDAASSPAVILGGFQMENMLLQF DSEKKRLGFARLPFYTSCSNFNFTKTQ</aaseq>

Gene Sequence

<dnaseqindica>13..1272#atatcgttcaagatgccgccacgaaacggcaacctcgtcctcgccgccgccgccgccgcgctgctcgtgctgctggcgtcgccgccgtcgtgctccgccgcggcgcctcgtcgtcgggaccccgtggtggttcccgtcaccagggacccggccacctcgctctacaccatccccgtcaggtactacgacaacctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgcgccgccgaccacctgccggcgtcgctgtcctgccaggacccgacgtgcgtggtcgccaacgcgtaccgtgctccgacctgcaaggtcaccggcggcggcggcgactgcagcaagaacgtgtgcacggcgtacccgtacaacccggtgaccgggcagtgcgccgccgggaaccttgcccacacgaggttcatcgccaacaccaccgacggcaagaaccctctgatccaggtctccgtcaaggccgtggcggcgtgcgcgcccaagaggctcctggcgcggctgccgcgcggcgccacgggcgtcgccggcctcgccgcctccggcctcgcgctcccggcgcaggtcgcgtcgtcgcagggcgtcgccggcaggttcctcctctgcctcccgaggctcgggtacggccagggcgtggccatcttcggcggcggcccgatatacctcggcgaagggctgccggacttcacgacgacgctggactacaccccgctcgtcgccaagagagacaaccccggctactacgtcaccgccaacgccatcgccctcgatgacgcgcggctacccctcccgagcggcgcgctcgccgccggcggcgtggcgctgcgcaccgccgtgccgttcggccaactccggccggacgtgttccgcccgttcgtccgggagttcgagaagggcctgaaccggagcgacgcgaaggtcgccgccgtggcgccgttcccgctctgctacagggcgtcgatgctggggaacacgcggatcggctactttgtgccggcggtgaggctgatgctcgccggcgggaagaactacacgatgacggggaccaactcgatggtggacgtgaaggggggcaaggcgtgcctggccttcgtggagatgaagtccggcgacgccgccagttcgccggcggtgatcctcggagggttccagatggagaacatgttgctgcagttcgactcggagaagaagcggctcgggttcgcgaggctgccgttctacacgtcgtgcagtaacttcaatttcaccaagactcagtagataatttacttacttaccactgtttcgcggccatgtaactgtaactgtaatgtcggtgtccggcatgccatatgcccgtatctgtcacccatttaagaactttgcttttaatatatagtccatctaccatct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0937100, RefSeq:Os01g0937100