Os01g0939200

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0939200| Description = Conserved hypothetical protein| Version = NM_001051881.1 GI:115442132 GeneID:4326508| Length = 2079 bp| Definition ...")
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Gene Name

Os01g0939200

Description

Conserved hypothetical protein

Version

NM_001051881.1 GI:115442132 GeneID:4326508

Length

2079 bp

Definition

Oryza sativa Japonica Group Os01g0939200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43022231..43024309

Sequence Coding Region

43023038..43023043,43023144..43023213,43023299..43024251

Expression

GEO Profiles:Os01g0939200

Genome Context

<gbrowseImage1> name=NC_008394:43022231..43024309 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43022231..43024309 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgctcgactccgtcgacggcctcctcctgctgcagcgggaccacgacaccgccatccgcctcctccaccccttcaccggcgacatcgccgacctcccgcccctcgagaccctccggccgcagatgggtaacaccacaaactccgttctgtggaattacaacgaagagaagcacaggataggtttcctcagagatgtctgcgcttctgtcagtgttaacgacactggcagcatcactgtcatgctggccttccacctgttcaaccgggtagctttcgccgcctccggcgacctgcaatggactctgtccaaatgttactttgggcgcccctgctggaggacattgtcataccaagggaagctgtttatggtgaaggctaagcacgatataaccggcaattcagacattctccagattgatccacccaatgatcaggatgctgaaggctctcctttgccagagaaggagctggcaccgaagctggttgcaacaattcctaaggacaagctgttcggcccttgttttctggcagaatgcgactcggagatactgataattggccatgacagtagacccacatcattagactcacagaccatgctgctgccttttgcctacaacgacattggaaattacactcacacttcagtgtataggatttctgaccttacctcaggaagatttagtccggtggcgagcattggtgaccatgccttgttcattggtccacggactatctgtgtctcctctaaggcacttcctaccattttctgtggtgatactggtggttatatatttcacactcctccaacggaattgttctttacgcaataccacctcagcagtcgtacctggtcacctctgattgatggaagcattggaaattcacctccacctaggccgtatagcctcattcaccatatcttaacatgttgctatcgtaaatattggaataaggggctgattttttacagggagacaacaccttcgtggcgtgttaagcgaaattgccgagttggtggctaa</cdnaseq>

Protein Sequence

<aaseq>MVLDSVDGLLLLQRDHDTAIRLLHPFTGDIADLPPLETLRPQMG NTTNSVLWNYNEEKHRIGFLRDVCASVSVNDTGSITVMLAFHLFNRVAFAASGDLQWT LSKCYFGRPCWRTLSYQGKLFMVKAKHDITGNSDILQIDPPNDQDAEGSPLPEKELAP KLVATIPKDKLFGPCFLAECDSEILIIGHDSRPTSLDSQTMLLPFAYNDIGNYTHTSV YRISDLTSGRFSPVASIGDHALFIGPRTICVSSKALPTIFCGDTGGYIFHTPPTELFF TQYHLSSRTWSPLIDGSIGNSPPPRPYSLIHHILTCCYRKYWNKGLIFYRETTPSWRV KRNCRVGG</aaseq>

Gene Sequence

<dnaseqindica>1267..1272#1097..1166#59..1011#cttcaacctctccaccggcgccctcgcccgcgccaagctcctgctcttccaggaccacatggtgctcgactccgtcgacggcctcctcctgctgcagcgggaccacgacaccgccatccgcctcctccaccccttcaccggcgacatcgccgacctcccgcccctcgagaccctccggccgcagatgggtaacaccacaaactccgttctgtggaattacaacgaagagaagcacaggataggtttcctcagagatgtctgcgcttctgtcagtgttaacgacactggcagcatcactgtcatgctggccttccacctgttcaaccgggtagctttcgccgcctccggcgacctgcaatggactctgtccaaatgttactttgggcgcccctgctggaggacattgtcataccaagggaagctgtttatggtgaaggctaagcacgatataaccggcaattcagacattctccagattgatccacccaatgatcaggatgctgaaggctctcctttgccagagaaggagctggcaccgaagctggttgcaacaattcctaaggacaagctgttcggcccttgttttctggcagaatgcgactcggagatactgataattggccatgacagtagacccacatcattagactcacagaccatgctgctgccttttgcctacaacgacattggaaattacactcacacttcagtgtataggatttctgaccttacctcaggaagatttagtccggtggcgagcattggtgaccatgccttgttcattggtccacggactatctgtgtctcctctaaggcacttcctaccattttctgtggtgatactggtggttatatatttcacactcctccaacggaattgttctttacgcaataccacctcagcagtcgtacctggtcacctctgattgatggaagcattggaaattcacctccacctaggccgtatagcctcattcaccatatcttaacatgttgctatcgtaaatattggtaagtgtctttacttcattgatgttccttcgttgccttttcattctacctggcatgctaattgtttcttttctcatgcttataggaataaggggctgattttttacagggagacaacaccttcgtggcgtgttaagcgaaattgccgagttggtgtaagtcttatttctgatatcatgcctcttttcttatgcaaacacttgaatcctacttatttttgactttgctggttcattttatcttttttttttctagggctaaaagacttgcaatacggagtttggaacacaaatcctttgtggcgtgtaaagcgaaattgccgagatggagtaagttttactccgtatttcggatctcttgattatgcaaatactatgtttggcacagcttcaactccagctccacctctattggagttgtagctcagccaaacagtttcagctccacctaaaataggagcggagctgagtggagctctcttacaaaatatactagagatatggagctgggtttaggcagctccacaattccactctagacccaactcctgaagcaaaaattaggagttgtagctcagccctaatacgcttgccctacttctaatctaattaatggtatttccatttttctttctttctaggcctgaaggactattgtggagttaaagtatacgatcctattttgtcgctgtcaaaaactccaaaaccctcaactatatatctgaactttctgaatccatttcgggattacgctacgatggagaaatctttaaattggagctcaggcagtgtttggcaaatatctaagggaaatgatttcccacccctctttaaatcttaaccattcattctccctcatccatttaatcctaacccttcattcaattcctaatcccaatcccacctctcatttcccattatccaaacacaccctcaattcatgaatatgaggagaagtcggcttgaacatcgtgaagatggagaatttgtaatctctttggtgaagatggagaatgtgtaatttcttatctaagagatgatataacacgtcagcaagaatttgctgcat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0939200, RefSeq:Os01g0939200