Os01g0939600

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0939600| Description = Similar to Glycerol-3-phosphate dehydrogenase-like protein (Fragment)| Version = NM_001051885.1 GI:115442140 GeneID:4...")
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Gene Name

Os01g0939600

Description

Similar to Glycerol-3-phosphate dehydrogenase-like protein (Fragment)

Version

NM_001051885.1 GI:115442140 GeneID:4326512

Length

4307 bp

Definition

Oryza sativa Japonica Group Os01g0939600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43040435..43044741

Sequence Coding Region

43040971..43041634,43042564..43042785,43043397..43043644,43043784..43043923,43044392..43044515

Expression

GEO Profiles:Os01g0939600

Genome Context

<gbrowseImage1> name=NC_008394:43040435..43044741 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43040435..43044741 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>attacggctgttggcgagaggagacagatggtcgggagcgtgcacgtgaatggatcggtgaacggcggcaatggcaccgaggagaggctcgacgagctgcgccgcctgctcggcaagtccgacggcgacttgctgaagatcgtcggcattggcgccggcgcgtggggcagcgtcttcgccgccctgctgcaggacgcctacggccgtttccgggagaaggttcagatacggatatggcgccgggcggggcggtcggtggaccggaccaccgcggagcatctgttcgaggtgatcaactcgagggaggacgtgctgaggcggctcatccgccgctgcgcctacctcaagtacgtcgaggcgcgcctcggcgacaggacattgtacgccgatgagatactgagggacggcttctgcctgaacatgatcgacacgccactctgccctctcaaggtggtcaccaacctgcaggaagctgtctgggatgctgacattgtggtgaacggccttccatccaccgagacgagggaggtgttcgaggagatcagcaagtactggaaggagcggatcagcgttccggtgataatctcgctcgcaaaggggatagaagcatccttggacccaattcctcgtatcattacgcccacgcagatgattagttctgcaactggagttccaactgagaatatactatatcttggaggcccaaacattgcctcagagatttataacaaagaatatgcaaatgctcgaatctgtgggtccaacaagtggaggaaacctctcgctaagtttctgagacaaccacatttcattgtctgggataacagtgatcttgttacacatgaggtgatgggtggtttgaagaatgtctacgccatcggtgctggaatggttgcagctttaactaatgagagtgcaacaagcaagtcggtgtattttgctcattgcacgtcagagatgatattcattactcatttgctcacagaacaacctgagaaacttgctggccctctgctggctgatacttatgttactctcctgaaaggtcgcaatgcgtggtatgggcaaatgctagcgaagggagaactgagccctgacatgggcgacagcatcaaggggaaggggatgattcagggtatctctgctgttggtgcattttttgagcttctcagtcaacccagcttaagtgtgcaacacccagaggaaaataagcaagttgcacctgctgaactgtgcccgatcttgaagaggctctatagaatactaataaaaagggagctctcgacaagagatattctgcaagccctgagagatgaaaccatgaatgatcctcgtgaaaggattgagatggcgcaaagccatgcattctaccgcccatctctcctaggaaaaccatga</cdnaseq>

Protein Sequence

<aaseq>ITAVGERRQMVGSVHVNGSVNGGNGTEERLDELRRLLGKSDGDL LKIVGIGAGAWGSVFAALLQDAYGRFREKVQIRIWRRAGRSVDRTTAEHLFEVINSRE DVLRRLIRRCAYLKYVEARLGDRTLYADEILRDGFCLNMIDTPLCPLKVVTNLQEAVW DADIVVNGLPSTETREVFEEISKYWKERISVPVIISLAKGIEASLDPIPRIITPTQMI SSATGVPTENILYLGGPNIASEIYNKEYANARICGSNKWRKPLAKFLRQPHFIVWDNS DLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLTEQPEKL AGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGDSIKGKGMIQGISAVGAFFELLSQ PSLSVQHPEENKQVAPAELCPILKRLYRILIKRELSTRDILQALRDETMNDPRERIEM AQSHAFYRPSLLGKP</aaseq>

Gene Sequence

<dnaseqindica>537..1200#2130..2351#2963..3210#3350..3489#3958..4081#gtcgtctctcgcccacttcgtcgctcgctcgctcattaatggcggccactgcatcgttggcgccgtccatctccattaatgcctccatccacctcgcccatccctacactctactactcctccacttaacaagatgagctgagcgccagcttctcggcacgggccgttgcatcctctccattccatccaccacccacccacccatccaacctccgcccccggtatccttgagctggaggaggtgggtgacggttgtaaggaatgatttccttctctacttatcctttttgttgccctttttgatgtctttgtgtggttgtaggtggtggtggtggatcacctgttcttgggattctgctgctgcgagtgcgtgcattgtggtggggggtgtttggttcttggttggtgagcggtgtttgaagcggtttcgcgcgtggtcgttgggtgatgcgagagctgggaagctgtgaaagcctcgcgcttaaggtgctcgatcaattgccgctgagagcgcacgcctctgatttcgctgctgaattacggctgttggcgagaggagacagatggtcgggagcgtgcacgtgaatggatcggtgaacggcggcaatggcaccgaggagaggctcgacgagctgcgccgcctgctcggcaagtccgacggcgacttgctgaagatcgtcggcattggcgccggcgcgtggggcagcgtcttcgccgccctgctgcaggacgcctacggccgtttccgggagaaggttcagatacggatatggcgccgggcggggcggtcggtggaccggaccaccgcggagcatctgttcgaggtgatcaactcgagggaggacgtgctgaggcggctcatccgccgctgcgcctacctcaagtacgtcgaggcgcgcctcggcgacaggacattgtacgccgatgagatactgagggacggcttctgcctgaacatgatcgacacgccactctgccctctcaaggtggtcaccaacctgcaggaagctgtctgggatgctgacattgtggtgaacggccttccatccaccgagacgagggaggtgttcgaggagatcagcaagtactggaaggagcggatcagcgttccggtgataatctcgctcgcaaaggggatagaagcatccttggacccaattcctcgtatcattacgcccacgcagatgattagttctgcaagtaagcagctctctcttatctctttgcttatgcctacatgctcacctattaagatactctttatgtcatagtgtcatcaaggaatagaaatggagttggttagtggaaggttgcaataaatatatttaatgaaagaaacacatagtactgtactatggataaataggttactaaatgattcccaaagggcatacattgagtgaagggcttattaatgatttaaacagtgtgctcttcgatgtttgaatttctgctgctgatgctattaactagagcacatgacattccgaagtaccagttcagtatttttatcaggtaactgtcaatgtccagctttacagaacaaaaatgtattcagtacttatagttgccatgacatgtactccctccgtactcgtaaaggaagtcgtttaggacaatgtttaagtcaaaccttgggaatataaatcatgaataactctcaagttattgagtttgaaaatgtaaaaattatatgaatagatttgtcttgaaaaatactttcataaaagtatacatatatcattttttaataaatatttttatagaaataagaagtcaaagttgtgttttggacaccgtgtcgctgtcctaaacgacttcctttacgagtacggagggagtataattctgtagcattcattgacattttgggtgtgcactaacccttggttttgcttaatcacatcacatggcctgctctgtttgaagactgtttacatgaaaacacaaatacactgttcttgtcaattcattatagacagggacatgctacttattttctgactcatgctaaagatggtcttatcttgacatgcatttatgtgatattaactttcgttgacccaacctattccttcccttgttttattcaaattacaactaattcagcattttaaaataaattgcagctggagttccaactgagaatatactatatcttggaggcccaaacattgcctcagagatttataacaaagaatatgcaaatgctcgaatctgtgggtccaacaagtggaggaaacctctcgctaagtttctgagacaaccacatttcattgtctgggataacagtgatcttgttacacatgaggtgatgggtggtttgaagaatgtctacgccatcggtgctggtaagaatattttaaatacgttctgtttgttttccaaaatattaactatctttataacagtaaaaataattaactaatcctactaacaaacgaatggagttgctgctttctccactgatccttccattcaatcatgggtttgccatatgttcaggttttacttaatttgtttaattcacaccatgatcacttgcctccatttgtctgggtaattgagtttatttacttattcttccaatctgaaacaaaccattcatctagtctgagaagctcatgactatctgaaaacttagcttcttccattctagtttgaactgtggtctatattgatttgaactgtactctttcaaactccggttcgttgcttttggctagcctggatgaaaaatgtactgtttcatatttgccacaaactgctatgggtatgtgaaagatagttaatgcaaatttggttgaccacatatttacaagttcatattcttttgcattataccaactcgacgttcacaacagttctgtttgaagactgtttacaagttatagttttttctctctctgttcaaggtatatgtcatgttttgagattaataataacccactttctgttccaggaatggttgcagctttaactaatgagagtgcaacaagcaagtcggtgtattttgctcattgcacgtcagagatgatattcattactcatttgctcacagaacaacctgagaaacttgctggccctctgctggctgatacttatgttactctcctgaaaggtcgcaatgcgtggtatgggcaaatgctagcgaagggagaactgagccctgacatgggcgacagcatcaaggggaaggggatgattcaggttatctcataaaactactcattattttccccgaaagttatatgaattttgagcgtatttttgaagaatgctggaagtcaaaacttgcaaaagatatcacatcatcctggatataacctgttcacttttcactctacagggtatctctgctgttggtgcattttttgagcttctcagtcaacccagcttaagtgtgcaacacccagaggaaaataagcaagttgcacctgctgaactgtgcccgatcttgaagaggctctatagaatactaataaaaaggtctgtgctctgttttaccaatatggctatggtgctctgggctccttcaactatgtacagtatgcacgaggaatgcagttcacaacttcacatccttcactgcttctagctgtttccacttgccagtgtgaatagattgtagagagtatcataaactgcagtaagaaaacaatcacctttcttcatgaactcaacatagctccagcatgcagaagtctatgggcataaagagctcagaagtaccgtgtgcttgttgacatttcatttcattagtaggtgctctttagatttttccttgaaatactggttaaaattctaagcagtttcttttgaggcgcttgtgtgtattgcgcataacaaacttgttttcttacatgtcaaggtcaatcatcaactttttctataacttagtataacacatctgtttcaaccagcaatgtatctttaactcactgttttgatctacagggagctctcgacaagagatattctgcaagccctgagagatgaaaccatgaatgatcctcgtgaaaggattgagatggcgcaaagccatgcattctaccgcccatctctcctaggaaaaccatgacctgttcgtcctgtatatgattagaacataaacaaggttggatgagacctctagtttgacatgcttagcatcattcgttattaagcctgaagaaggtgattgtcgctggcctatgtgtgaactgtgaatcccaatggggcttatttttctggaattgttagtactttgattatcatgccgtacaacagtacaagagagagtgcacagagtcaataaagaatttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0939600, RefSeq:Os01g0939600