Os01g0940700

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0940700| Description = Similar to Glucan endo-1,3-beta-glucosidase GII precursor (EC 3.2.1.39) ((1->3)- beta-glucan endohydrolase GII) ((1->3...")
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Gene Name

Os01g0940700

Description

Similar to Glucan endo-1,3-beta-glucosidase GII precursor (EC 3.2.1.39) ((1->3)- beta-glucan endohydrolase GII) ((1->3)-beta-glucanase isoenzyme GII) (Beta-1,3-endoglucanase GII)

Version

NM_001051891.1 GI:115442152 GeneID:4326518

Length

1710 bp

Definition

Oryza sativa Japonica Group Os01g0940700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43141494..43143203

Sequence Coding Region

43141596..43141665,43142096..43142280,43142458..43143018

Expression

GEO Profiles:Os01g0940700

Genome Context

<gbrowseImage1> name=NC_008394:43141494..43143203 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43141494..43143203 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaagcatggcgttgcttccgttttaacactggcattggtccttggagttgcggccattcctacagtggtgcaatctatcggcgtgtgctacggcgtgatcgggaacaacctgccgtcgccgagcgacgtcgtgcagctctacaagtccaacggcatcgactccatgcgcatctacttcccaagaagcgacatcctccaggccctcagcggctcaagcatcgccctcaccatggacgtcggcaacgatcagctcggcaacatcaaggtgtcgacgtcggtgtcccagggcgtgaccgccggcttcccgccgtccgccggcacgttctccgcctcgcacatggggcccatagctcagtacctggcgagcaccggcgcgccgctgctcgccaacgtctacccctacttcgcctacgtgggcaaccaggcccagatcgacatcaactacgcgctcttcacgtcgccgggcacggtggtgcaggacggcggcaacgcgtaccagaacctgttcgacgccatcgtcgacacgttctactccgcgctggagagcgccggcgccgggagcgtcccgatcgtggtgtcggagagcgggtggccgtcggccggcggcacggcggcgagcgccggcaacgcgcagacgtacaaccagaacctgatcaaccacgtcgggcaggggacgcccaagaggcccgggagcatcgagacctacattttcgccatgttcaacgagaaccagaagggaggcgacgagacggagaggcacttcggcctcttcaacccggaccagtcgccggcatactccatcaatttctaa</cdnaseq>

Protein Sequence

<aaseq>MAKHGVASVLTLALVLGVAAIPTVVQSIGVCYGVIGNNLPSPSD VVQLYKSNGIDSMRIYFPRSDILQALSGSSIALTMDVGNDQLGNIKVSTSVSQGVTAG FPPSAGTFSASHMGPIAQYLASTGAPLLANVYPYFAYVGNQAQIDINYALFTSPGTVV QDGGNAYQNLFDAIVDTFYSALESAGAGSVPIVVSESGWPSAGGTAASAGNAQTYNQN LINHVGQGTPKRPGSIETYIFAMFNENQKGGDETERHFGLFNPDQSPAYSINF</aaseq>

Gene Sequence

<dnaseqindica>103..172#603..787#965..1525#gcatcgatctgcatgcgaagtcctgcagcctccgtagcagacacgtacaacgtaccgagcaaccttagctagtggcgcctgaaaattattaagcgcttcaagatggcaaagcatggcgttgcttccgttttaacactggcattggtccttggagttgcggccattcctacaggtaataattgtatattgtcttaataaaattcggtttgtctaaaactcttagtcctctcgtttgtttaaaacccattcaaatagttatggaaatttctgaaacagattgacgacattcatagaaaatatgtatatactaattcactaaattttagatcctaacacaactcatcacacattatggtataaaaaaagataaatacgaacgaaatttatcttcttttttttcttaatgtggatggtgaaatttgaacttgatttttggtgtagtggtacatgttactgtactctatattattaatttgattaaattttttcttaactatttgtgttgaatttggaaaaaaaagttataagatggaatattctctaaagggattaataatccactcccaaacaaaaaggagtctaatatatcaaatcaaacacagtggtgcaatctatcggcgtgtgctacggcgtgatcgggaacaacctgccgtcgccgagcgacgtcgtgcagctctacaagtccaacggcatcgactccatgcgcatctacttcccaagaagcgacatcctccaggccctcagcggctcaagcatcgccctcaccatggacgtcggcaacgatcagctcggctccctcgcctccgacccctccgccgccgccgccttcgtccagaacaacatccaggcgttcccgggcgtcaacttccgctacatcacggtcggcaacgaggtttccggcggcgacacgcagaacatcctcccggccatgcagaacatgaacagcgccctctccgccgccggcctcggcaacatcaaggtgtcgacgtcggtgtcccagggcgtgaccgccggcttcccgccgtccgccggcacgttctccgcctcgcacatggggcccatagctcagtacctggcgagcaccggcgcgccgctgctcgccaacgtctacccctacttcgcctacgtgggcaaccaggcccagatcgacatcaactacgcgctcttcacgtcgccgggcacggtggtgcaggacggcggcaacgcgtaccagaacctgttcgacgccatcgtcgacacgttctactccgcgctggagagcgccggcgccgggagcgtcccgatcgtggtgtcggagagcgggtggccgtcggccggcggcacggcggcgagcgccggcaacgcgcagacgtacaaccagaacctgatcaaccacgtcgggcaggggacgcccaagaggcccgggagcatcgagacctacattttcgccatgttcaacgagaaccagaagggaggcgacgagacggagaggcacttcggcctcttcaacccggaccagtcgccggcatactccatcaatttctaagaagattgttctgagaagagatcgatcgatgatgaattaaacgtcgatcgatatagatatatacatacacgcgttccatatatagtttgggtttgaataagctttctgcctgcatattgcaaagctcaatgcatgcatgtaacggtgcagagacaaataatatgaacttgaataaagtttaccag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0940700, RefSeq:Os01g0940700