Os01g0941800

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0941800| Description = Phosphoesterase At2g46880 family protein| Version = NM_001051896.1 GI:115442162 GeneID:4326052| Length = 2034 bp| D...")
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Gene Name

Os01g0941800

Description

Phosphoesterase At2g46880 family protein

Version

NM_001051896.1 GI:115442162 GeneID:4326052

Length

2034 bp

Definition

Oryza sativa Japonica Group Os01g0941800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43179186..43181219

Sequence Coding Region

43179447..43179659,43179809..43179983,43180067..43180331,43180499..43180723,43180797..43181067

Expression

GEO Profiles:Os01g0941800

Genome Context

<gbrowseImage1> name=NC_008394:43179186..43181219 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43179186..43181219 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggtgctggcgtcgcctggcggcggccggcgcactgctcgccgccctctgcgccgcgcttgctctggcggtggcggagcaccggcgccctgacaccacggccagcagcagcagccgccggccgctgcggttcgcgtcgggaggagggttcaaggtggcgctcttcgccgacctgcattacggcgagaacgcctggacggactggggcccacggcaggacgccggctccgaccgcgtcatggccgccgtcctcgacgccgagaagcccgacttcgtggtgtacctcggcgacctcgtgaccgcgaacaatctagggatccccaacgcgagcctgtactgggacagagcgatttctccgaccagaggcagggggatcccgtgggcgacggtgttcgggaaccacgacgacatgccgttcgagtggcctcctgagtggttctctcctgcaggcgttccgccgctgcattgcccaccaccgagcatgtcagattcagactgcagcttccgaggaacaccgcgacttgaactgatgacaagtgaggttatccgtaatggattgtcatattcatcaaatggccccaaggacctctggcctgctgtttccaactacgtcttgcaggtgctatcacagaagcgagatgatccagctctgctcatgtatttccttgactccggtggtggatcctatccagaagtgatatccagtgctcaggttcagtggtttcatagtcaatctcagttccttaatccaaatggaaggattccagagataatcttttggcatattccaagtacggcatatgccaaggttgcgccgaaagctaagtccgaaataagaaaaccctgtgttggctctatcaacagggaagaagtagcaccacaagaagctgaatggggtatgatggatgcccttgtcaagagggcttcagtgaaggcaattttcgttggtcacaaccacggcctggattggtgctgcccacacgagaaactctggctatgttttgcccgacacacaggctatggtggctacggtaactggccaagaggagcaagggttattgagatatctgaacagcccttctcaattcagtcatggatacggatggaggatgggacaacgcacagcgatattagcttgagctcctag</cdnaseq>

Protein Sequence

<aaseq>MRCWRRLAAAGALLAALCAALALAVAEHRRPDTTASSSSRRPLR FASGGGFKVALFADLHYGENAWTDWGPRQDAGSDRVMAAVLDAEKPDFVVYLGDLVTA NNLGIPNASLYWDRAISPTRGRGIPWATVFGNHDDMPFEWPPEWFSPAGVPPLHCPPP SMSDSDCSFRGTPRLELMTSEVIRNGLSYSSNGPKDLWPAVSNYVLQVLSQKRDDPAL LMYFLDSGGGSYPEVISSAQVQWFHSQSQFLNPNGRIPEIIFWHIPSTAYAKVAPKAK SEIRKPCVGSINREEVAPQEAEWGMMDALVKRASVKAIFVGHNHGLDWCCPHEKLWLC FARHTGYGGYGNWPRGARVIEISEQPFSIQSWIRMEDGTTHSDISLSS</aaseq>

Gene Sequence

<dnaseqindica>1561..1773#1237..1411#889..1153#497..721#153..423#aagcagcagtgacgtactgacgttaatcgcagctctacccatcatttgcagccaccagcatctgctccggcacgcttctgccaccgccgtcgccggagatccgtcacgcgtccgactccgattgactgaaccgtcggagcacgtacgccgggatgcggtgctggcgtcgcctggcggcggccggcgcactgctcgccgccctctgcgccgcgcttgctctggcggtggcggagcaccggcgccctgacaccacggccagcagcagcagccgccggccgctgcggttcgcgtcgggaggagggttcaaggtggcgctcttcgccgacctgcattacggcgagaacgcctggacggactggggcccacggcaggacgccggctccgaccgcgtcatggccgccgtcctcgacgccgagaagcccggtgcgtgcggcgtcccctcgcctgaaatgtaaaattgcgagttcttttcgctgaaatctcccggaattcgcagacttcgtggtgtacctcggcgacctcgtgaccgcgaacaatctagggatccccaacgcgagcctgtactgggacagagcgatttctccgaccagaggcagggggatcccgtgggcgacggtgttcgggaaccacgacgacatgccgttcgagtggcctcctgagtggttctctcctgcaggcgttccgccgctgcattgcccaccaccgagcatgtcagattcaggtaaacttaagatagttcatttctgaatttgtttcagttcagtcactgaacttcagcgcagaaaaaagaaaaggaaaagaaagaaggcaaccactgtatgctttcaaacaaaagtaatcattcatttgaacttttcaagaaaaccatgtttttaacttgatgtgcagactgcagcttccgaggaacaccgcgacttgaactgatgacaagtgaggttatccgtaatggattgtcatattcatcaaatggccccaaggacctctggcctgctgtttccaactacgtcttgcaggtgctatcacagaagcgagatgatccagctctgctcatgtatttccttgactccggtggtggatcctatccagaagtgatatccagtgctcaggttcagtggtttcatagtcaatctcagttccttaatccaaatggaaggtcagaaacttgtatcaattttgcacatactcaaaattcaagcttctgcaactcaaaattaatgttgtgtaattattctacaggattccagagataatcttttggcatattccaagtacggcatatgccaaggttgcgccgaaagctaagtccgaaataagaaaaccctgtgttggctctatcaacagggaagaagtagcaccacaagaagctgaatggggtatgatggatgcccttgtcaagagggcttcagtgaaggtttgtttcatctgaacatttcttgacatgtatacagaatttcttatcccctgaatcccttcagataacttagatacacaggtcaaaattcagaagacacttactttttatttgttagagaacatatatcattggttgtcattttacaggcaattttcgttggtcacaaccacggcctggattggtgctgcccacacgagaaactctggctatgttttgcccgacacacaggctatggtggctacggtaactggccaagaggagcaagggttattgagatatctgaacagcccttctcaattcagtcatggatacggatggaggatgggacaacgcacagcgatattagcttgagctcctagacttgtaaatgaaatgtagttgctggagttttatttcagacaaataaagagtccaagtaggaaaatgaaggtggacactgtatataattaagctgagcccccttgtaaaattgtaatatatgcgtacagagtaagaaaaggttggcagaaagaaagagaaaagagtaggaaaaatgatgaacctatgggatccactgccacgtgtcaagctacgtggtgccatgtcagatgaaatcaccagaaaaaaaagttacagggagg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0941800, RefSeq:Os01g0941800