Os01g0942200

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0942200| Description = Protein of unknown function DUF295 family protein| Version = NM_001051897.1 GI:115442164 GeneID:4326053| Length = 14...")
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Gene Name

Os01g0942200

Description

Protein of unknown function DUF295 family protein

Version

NM_001051897.1 GI:115442164 GeneID:4326053

Length

1465 bp

Definition

Oryza sativa Japonica Group Os01g0942200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43189586..43191050

Sequence Coding Region

43189654..43190976

Expression

GEO Profiles:Os01g0942200

Genome Context

<gbrowseImage1> name=NC_008394:43189586..43191050 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43189586..43191050 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtggcggcggcggacggcatcgccgcactcgtcgactggtccgaccttctgccggtgatcctcgaggacatctcccagcgcgtccatggcgacgaccgcgccgtgtttgccgccgtctgcaagtcgtggcggcgcgcggcgagcgcggcgggccctcgcctcagccgccactccctccaccttgtggcgctctgctccggcgccaacgccgtcgacttctcctcccgccacggcgacgtcgtcaagacggcgtacctcggcagcggcggcgcgcgcccccaccgcatcatcggctgctcccacggctggctcgtcgtcgtggacgaggcgtgccgcgcctccctcctcgagcccttcaccgacggcgcgcaggtacccctgccgcccgtcacgtcgttcgactgcgagtacttcgtcacggccgtcggtggcgacggcgacggcgtcccggaatacttcgcggtggacaatcacgcctatcaccaccatctccaaggccatcgcaagatcgagtggaagcctcccaaattggtgccggtccagtcgatgcgcgatgagttcttccagaaggcggccatcgccccggggagccaccggaaggagagctacgccgccgtgatggtaagccacagcggcggctccgggctggcattcgcgaggtccggcgacgaccgctggacgtcgctgcccacccaggcattgacgcggtacgcggacgtcatctggcacaacggcgcgttctacacgctcacccgcggcgacggcgccgtggaggcgtgggagccggacggccgcgccctgaagccacggctcgtgacggggccggtcatgaggtgggagttcaagcggctggtggaattccacagcgacacgttccaccagccggcgttctacgagggcgcgaggtacctggccaagcaggcggacggcggcggggggctactggtggtgagcaccgtggccatcctcgacgacagcaacgcgctgcgggcgcggcggttcaaggtgttcgacgtggacgaggacaagggcgagtggcgctcccgggacgacgtcggcgacgccgcagtgctggtggggatcaaccacggcgagtgcgtgtcgacgcgggagtacccgtgcctgaagcccaactgcgtgtactacgtggtcaagtcgttcgcggcggatttcgaggaggaggagaagggatgctcgcggtacgagagcggcgtgtgcgatgtcaagacgggggtggcgtccaggatgtcggtgtttcggcgcgccgccggcggccatcctgtttggtttgtgccctccgctgtttctcgcaggtga</cdnaseq>

Protein Sequence

<aaseq>MAVAAADGIAALVDWSDLLPVILEDISQRVHGDDRAVFAAVCKS WRRAASAAGPRLSRHSLHLVALCSGANAVDFSSRHGDVVKTAYLGSGGARPHRIIGCS HGWLVVVDEACRASLLEPFTDGAQVPLPPVTSFDCEYFVTAVGGDGDGVPEYFAVDNH AYHHHLQGHRKIEWKPPKLVPVQSMRDEFFQKAAIAPGSHRKESYAAVMVSHSGGSGL AFARSGDDRWTSLPTQALTRYADVIWHNGAFYTLTRGDGAVEAWEPDGRALKPRLVTG PVMRWEFKRLVEFHSDTFHQPAFYEGARYLAKQADGGGGLLVVSTVAILDDSNALRAR RFKVFDVDEDKGEWRSRDDVGDAAVLVGINHGECVSTREYPCLKPNCVYYVVKSFAAD FEEEEKGCSRYESGVCDVKTGVASRMSVFRRAAGGHPVWFVPSAVSRR</aaseq>

Gene Sequence

<dnaseqindica>75..1397#atcctcgattctcgcgccgcgatcttatcttaaatgtgaagtgaaggtacgcggcgcgcggtgaactcgcgataatggcggtggcggcggcggacggcatcgccgcactcgtcgactggtccgaccttctgccggtgatcctcgaggacatctcccagcgcgtccatggcgacgaccgcgccgtgtttgccgccgtctgcaagtcgtggcggcgcgcggcgagcgcggcgggccctcgcctcagccgccactccctccaccttgtggcgctctgctccggcgccaacgccgtcgacttctcctcccgccacggcgacgtcgtcaagacggcgtacctcggcagcggcggcgcgcgcccccaccgcatcatcggctgctcccacggctggctcgtcgtcgtggacgaggcgtgccgcgcctccctcctcgagcccttcaccgacggcgcgcaggtacccctgccgcccgtcacgtcgttcgactgcgagtacttcgtcacggccgtcggtggcgacggcgacggcgtcccggaatacttcgcggtggacaatcacgcctatcaccaccatctccaaggccatcgcaagatcgagtggaagcctcccaaattggtgccggtccagtcgatgcgcgatgagttcttccagaaggcggccatcgccccggggagccaccggaaggagagctacgccgccgtgatggtaagccacagcggcggctccgggctggcattcgcgaggtccggcgacgaccgctggacgtcgctgcccacccaggcattgacgcggtacgcggacgtcatctggcacaacggcgcgttctacacgctcacccgcggcgacggcgccgtggaggcgtgggagccggacggccgcgccctgaagccacggctcgtgacggggccggtcatgaggtgggagttcaagcggctggtggaattccacagcgacacgttccaccagccggcgttctacgagggcgcgaggtacctggccaagcaggcggacggcggcggggggctactggtggtgagcaccgtggccatcctcgacgacagcaacgcgctgcgggcgcggcggttcaaggtgttcgacgtggacgaggacaagggcgagtggcgctcccgggacgacgtcggcgacgccgcagtgctggtggggatcaaccacggcgagtgcgtgtcgacgcgggagtacccgtgcctgaagcccaactgcgtgtactacgtggtcaagtcgttcgcggcggatttcgaggaggaggagaagggatgctcgcggtacgagagcggcgtgtgcgatgtcaagacgggggtggcgtccaggatgtcggtgtttcggcgcgccgccggcggccatcctgtttggtttgtgccctccgctgtttctcgcaggtgaagtgatgacaaatttgaaaaccgtgtacttaaatttcagaaatttcaagggattttagttacccagag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0942200, RefSeq:Os01g0942200