Os01g0945766

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Revision as of 05:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0945766| Description = Amino acid/polyamine transporter I family protein| Version = NM_001185811.1 GI:297720756 GeneID:9268868| Length = 25...")
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Gene Name

Os01g0945766

Description

Amino acid/polyamine transporter I family protein

Version

NM_001185811.1 GI:297720756 GeneID:9268868

Length

2558 bp

Definition

Oryza sativa Japonica Group Os01g0945766, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43365597..43368154

Sequence Coding Region

43365597..43365956,43366054..43366473,43366570..43366751,43366850..43367069,43367684..43367933
,43368051..43368154

Expression

GEO Profiles:Os01g0945766

Genome Context

<gbrowseImage1> name=NC_008394:43365597..43368154 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43365597..43368154 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctcgctccgtcggagtgacaatggacgccgccggcgccgatgcagaccaagcccggctgcaccagctgggctaccggcaggagctcaagcgtggcctctccctggtttccaacttcgccttctccttctccatcatctccgtgctgaccggcgtcacgacgacgtacggcacggggctgcgctacggcgggccggtgtccatgacgttgggatggctggtggtggcggcgttcaacggctgcgtcgccctgtccatggccgagatctgctcggcgtacccgacttccggcgggctatactactggagcgccaagcttgccggaaaggaatgggctcccctagcttcctggtgggcttgcacgacgagcgtggatttctcgctggcgcagcttctccaggtgatcatcttgcttgccacgggaggcgccaacggcggcggctacatggcgtccaagtacgtcgtgttggccatctactctgccatcctcatcctgcacggcctcatcaacagccttcccatacgatggctctcctggtttggccaacttggagctttctggaacgttgcaggtgccttttcgctgacgatcttgattccagcggttgccaaggagagggtgagccctgagttcatctttacccatttcaacgcagaaaacggcgcgggcatccacgacaaggcatacattctcgcagcggggttgctgatgagccagtactcccttatcggctacgatacatctgcacacatcatagaagagaccaagaacgcggattggagtgggccaattgggatcatcacgtccgttgcactgtcaaccatgttcggatggatctacctgattgccctgacatcgatcatgaccgacataccttacctcctgaaccccagcaacgacgccggcgggtacgccatcgcgcaggccctgtacaccagcttccaccggaggtacggcaccggcgccggagcgctcgcctgcctgggtgtcatcgccgtcgccatcttcctctgcggatccgcgtgcatcaccagcaactcgaggatggggtacgcgttctcgagggacggcgcgatgccgctgtcgcgcgtgtggcaccgcgtggacagccgcgaggtgcccctcaacgtcgtctggctctccgtcgccgtggccttcgtcatggctctcacgtcgctggggagtcaggtggctttccaggcgatggtgtcgatcgcgacgctgggtttgttgatcgcgtgcgcgctgccggtgtttttccgcgtgacgacggcgcggagatcgttcgtgcgcgggccgttccacctcggcaagtacggggtcatcgtcggctgggtgggtgtggtgtgggtggccaccgtcacggtgctcttctcgctgccggtggcgtacccggtggccaaggagacgttcaactacacgccggtggccgtcggtggcgtgctgctgctcagcctcgtcgcgtgggtgcttcacgctcgcttctggttccaagggcctgtcaccaacgttgacacgtacaacgtaccctga</cdnaseq>

Protein Sequence

<aaseq>MSRSVGVTMDAAGADADQARLHQLGYRQELKRGLSLVSNFAFSF SIISVLTGVTTTYGTGLRYGGPVSMTLGWLVVAAFNGCVALSMAEICSAYPTSGGLYY WSAKLAGKEWAPLASWWACTTSVDFSLAQLLQVIILLATGGANGGGYMASKYVVLAIY SAILILHGLINSLPIRWLSWFGQLGAFWNVAGAFSLTILIPAVAKERVSPEFIFTHFN AENGAGIHDKAYILAAGLLMSQYSLIGYDTSAHIIEETKNADWSGPIGIITSVALSTM FGWIYLIALTSIMTDIPYLLNPSNDAGGYAIAQALYTSFHRRYGTGAGALACLGVIAV AIFLCGSACITSNSRMGYAFSRDGAMPLSRVWHRVDSREVPLNVVWLSVAVAFVMALT SLGSQVAFQAMVSIATLGLLIACALPVFFRVTTARRSFVRGPFHLGKYGVIVGWVGVV WVATVTVLFSLPVAYPVAKETFNYTPVAVGGVLLLSLVAWVLHARFWFQGPVTNVDTY NVP</aaseq>

Gene Sequence

<dnaseqindica>2199..2558#1682..2101#1404..1585#1086..1305#222..471#1..104#atgtctcgctccgtcggagtgacaatggacgccgccggcgccgatgcagaccaagcccggctgcaccagctgggctaccggcaggagctcaagcgtggcctctcgtatgtgattcttctttcgttttttatgtttcttttcccatgcatttcatattgcgatcattttaaatttcaccgtagcttgtgagtgtaaacttaccatattgaatcctttgttagcctggtttccaacttcgccttctccttctccatcatctccgtgctgaccggcgtcacgacgacgtacggcacggggctgcgctacggcgggccggtgtccatgacgttgggatggctggtggtggcggcgttcaacggctgcgtcgccctgtccatggccgagatctgctcggcgtacccgacttccggcgggctatactactggagcgccaagcttgccggaaaggaatgggctcccctagcttcctgggtcactggctggtgtgctcttcgctaacatgttaatttatctctcatggtttaatcgttatcatgttttaaattttggaatttaataatatttccttattatgttttacaggttcaatattatgggacaggtatgaatatgtttctcacgggttcacaccaagtctaaatcatatatctctactattttaaaagcgaaattgttctacttacatgctctcatccgaatatgcataacgttttacaggttcaatattgtgggacaagtatgaatatgtttctcactggtccacactaagtctaaatcgtatatctctactattttaaaagcgaaattattctactttcatgctctcatccgaatatgcataacgcgtctgttcacgaaaagtaaccaccatccctccctaattatatggtgctggcccattaacgtataggcggctcatatccctaattatatgggtctaattcattataacatacatgcatataactagtaaaaagaagagttaattttacactctcgaactgttttcagaaagtgcagaaatcttttgagggaaaaaagtgcagaaatctgacactccaattgctcgttaactgatcctccagtgggcttgcacgacgagcgtggatttctcgctggcgcagcttctccaggtgatcatcttgcttgccacgggaggcgccaacggcggcggctacatggcgtccaagtacgtcgtgttggccatctactctgccatcctcatcctgcacggcctcatcaacagccttcccatacgatggctctcctggtttggccaacttggagctttctggaacgttgcaggtgctgttcgtcccggccatttttcagatattcagtgttgaatcccatatatacatcatctcattcttcggtttgtctgtttgaacaaacaattccaggtgccttttcgctgacgatcttgattccagcggttgccaaggagagggtgagccctgagttcatctttacccatttcaacgcagaaaacggcgcgggcatccacgacaaggcatacattctcgcagcggggttgctgatgagccagtactcccttatcggctacgatacatctgcacacatcgtaattctgaactttctgatagctgaacaatccttagtttctcgttgcatacatacaattcatccactaatcttctcctcgcatataaatattcagatagaagagaccaagaacgcggattggagtgggccaattgggatcatcacgtccgttgcactgtcaaccatgttcggatggatctacctgattgccctgacatcgatcatgaccgacataccttacctcctgaaccccagcaacgacgccggcgggtacgccatcgcgcaggccctgtacaccagcttccaccggaggtacggcaccggcgccggagcgctcgcctgcctgggtgtcatcgccgtcgccatcttcctctgcggatccgcgtgcatcaccagcaactcgaggatggggtacgcgttctcgagggacggcgcgatgccgctgtcgcgcgtgtggcaccgcgtggacagccgcgaggtgcccctcaacgtcgtctggctctccgtcgccgtggccttcgtcatggctctcacggtgagttgcacacgcgttgctgctgctgctgctgcaaatttctcgtgcgcgcgtacgtacgtgctggtctcatatagtgtacgtttttttggcacagtcgctggggagtcaggtggctttccaggcgatggtgtcgatcgcgacgctgggtttgttgatcgcgtgcgcgctgccggtgtttttccgcgtgacgacggcgcggagatcgttcgtgcgcgggccgttccacctcggcaagtacggggtcatcgtcggctgggtgggtgtggtgtgggtggccaccgtcacggtgctcttctcgctgccggtggcgtacccggtggccaaggagacgttcaactacacgccggtggccgtcggtggcgtgctgctgctcagcctcgtcgcgtgggtgcttcacgctcgcttctggttccaagggcctgtcaccaacgttgacacgtacaacgtaccctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0945766, RefSeq:Os01g0945766