Os01g0945800

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Gene Name

Os01g0945800

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001051915.1 GI:115442200 GeneID:4325826

Length

4842 bp

Definition

Oryza sativa Japonica Group Os01g0945800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43368789..43373630

Sequence Coding Region

43369130..43369198,43369378..43369506,43369629..43369733,43369805..43369944,43370034..43370175
,43370312..43370388,43370621..43370675,43371148..43371193,43371294..43371382
,43371484..43371549,43371848..43371913,43372305..43372394,43372497..43372514

Expression

GEO Profiles:Os01g0945800

Genome Context

<gbrowseImage1> name=NC_008394:43368789..43373630 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43368789..43373630 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccacaaaacttgtggttcttggaatcccatgggatgtggacactgaaggattaagagagtacatgggcaagtttggacccctagatgattgcgtcgtcatgaaggagcgttcgtctggtcgatctcgtgggtttggttatgtaacgttctcatcagctgatgatgccaagaatgttcttgagtgtgagcatgttctcggaaaccgaactctagaagtgaagatagccactcctaaggaagaaatgaaatcacagggatcaaaaaaggctactagaatatttgttgctcgaattccgcagtccgtggatgagtccatgtttcgtaggcattttgaagcctatggagaaatcactgatctttacatgccaaaggaacatggttcaaagggtcatcgtggaattgggttcatcacttttcagagtgcagaatctgtggacagtatcatgcaagattcacatgaactggatggcacaacagtagttgttgaccgcgccactcctaaggatgaagaagtcagatatcctccaagcaggggggcatctcagggtggctatggtgcatataatgcatacatttcagcagctaccagatatgcagctttgggtgcacctactctgtatgaccatccagggtcagcttatggaagaggaggatactatggatcctcccaaggaatgggcaacaaaaagatatttgttggcaggcttccacaagaggcaaacacggaggacctaaggcattactttggcaaatttggccgaattgtggatgcatatatcccaaaggaccctaaaagaagtggacatcgaggttttggttttgtcacctttgctgatgagggtgtggcagatcgggtagctcgcagaagtcatgaaattctaggacatgaggttgcaatagacactgctgcaccacttgagggtgactctggtggtggttacatggaacccatggatctttatggggcttatggttcaatgcgaacttatggcaggttctgcagtggtatcgactatgattacggttatggtcacagcggaagtagcagtagcagatcaagggctgattggcgataccgaccttactga</cdnaseq>

Protein Sequence

<aaseq>MATKLVVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSR GFGYVTFSSADDAKNVLECEHVLGNRTLEVKIATPKEEMKSQGSKKATRIFVARIPQS VDESMFRRHFEAYGEITDLYMPKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTT VVVDRATPKDEEVRYPPSRGASQGGYGAYNAYISAATRYAALGAPTLYDHPGSAYGRG GYYGSSQGMGNKKIFVGRLPQEANTEDLRHYFGKFGRIVDAYIPKDPKRSGHRGFGFV TFADEGVADRVARRSHEILGHEVAIDTAAPLEGDSGGGYMEPMDLYGAYGSMRTYGRF CSGIDYDYGYGHSGSSSSRSRADWRYRPY</aaseq>

Gene Sequence

<dnaseqindica>4433..4501#4125..4253#3898..4002#3687..3826#3456..3597#3243..3319#2956..3010#2438..2483#2249..2337#2082..2147#1718..1783#1237..1326#1117..1134#aagccaatttgcgacgaaccctaaccgcccaccaaatcctctcctccttccccaacggcgagcgtccccggcgaatccgccttgacggaggcaccccggcgagctcaccttcccggaggaatcccagctcagcctcatcgtcttcggtgaggtacgcatccctttgtcccatcacttttcacccgtcaattgcagtccccgacctggtagaggaggggagcacacagccgacgccatagcagcagcaaatctgacgtgccgtccgcctccgctctgctgcgggcgtcgattctggtgaccgtgccatgtcgcgctcgatgtgctggccttccggacggccggcgccgccatctcatcccgtagattccgaatcagcgagaaacgtgtgttactcgtgtagggaggggaacgtgaggaggacgaacccctacacctacaccttaggagttttgtgcctcctcccgatgtgaggggaataggggatcgtgtttcctgggcggagaaagctcttattgttttctgattatacacaattctgagtagtaacacgtgtctactgtgtctgtgtcccttccgcattttccgcttagtgcttacagcccagttgaacccaaatcagattttgtactgagcaaaatccttgaaccaaacatcccctggaaaaacttgctccttatcttagtgagaaatgaaacatttatcataattacattggattatttttttcttacatgtgcattttctgtatggccacgtgccattgaacatgggaagtagatctatttttctttcaccatttagtttacattgcatagcaggattttatttatgcagacatagtatttatgttgcatcctggatagtaaagtaatactagttctacgagtatgaatatgaatttaattttcttaccaaaccatataaaccatcataccctagtgtgcttacttgacttcatgcgcaagaaacttataagtgtggattctcttcatatatctgtagggaaatatcttggtgattcttgggaaccttcagaaagaccacttaatagttttccttggcccagaaaggcttgaggcttgagagctgaaaagttctgctggagctagtgctataatggccacaaaacttgtggtaagtggacaatctttctctttttaggattctataaacgaatgtgtcctttcatagtttaatcattcatgaagaatgatgacatgagatttatttacttaggttcttggaatcccatgggatgtggacactgaaggattaagagagtacatgggcaagtttggacccctagatgattgcgtcgtcatgaaggtttgtagcaatttcatattcagaataagatattagatgccatattctttgtgtttattacatgccattaagatttgaggagaatatgtttcttgtctttttaaagttatttgggaaaccacagcctcacatgttgtactgttggtaatctattcctttcaataatgagtttgccttggaacagatatggctatgtgcttgtatttcgctttcagtatctgatttctatttagtcttcctttttctggggttgtccgccaaaattgagtcctgaatttctggatgcacatcttaaataacttcttcagtactgtattcatcaatttattagcctgatttggtaatttgtgtactgactgaccactatctttcttgtacgttaaaattataggagcgttcgtctggtcgatctcgtgggtttggttatgtaacgttctcatcagctgatgatgccaaggtagtaatcctgttctcccagatttgctgacttgatattacattgcatgactagtgttgtattttaaatcttttgttagagtttatatatcaactgtgaaatatcaaccttcgaattttttaagaggtgcttagtaaagtggtttactaattaatgtggtataataaagtggtttagtaatatcttgtttactaattaatgtggtataataacatggtttagtaataccctatcttctaacatatttggtactgctgcaatttattcgttctgaatcattctgcaacatttttttcagaatgttcttgagtgtgagcatgttctcggaaaccgaactctagaagtgaagatagccactcctaaggtaaataaaatacaaacatatattatatatgctagcagtatgttgtacagttgattcacatcaagctgtagttgactatggtgtatcttgtcattgaataggaagaaatgaaatcacagggatcaaaaaaggctactagaatatttgttgctcgaattccgcagtccgtggatgagtccatgtttcgtaggtaagctatagcttcagtccttttgttcagcactcagttcacttatcagttgaatatccgagcttgcataaagactctaatcagaacattttattgataggcattttgaagcctatggagaaatcactgatctttacatgccaaaggtgagcaaatttggaattatttttaaattgctaaaaatatttatgtattctctgtgatatcacaattaagtaccaatacaagtagatacactctttctatatagttacctagatttgcttatcactagtttaactagatttccttccgataaggacaaatatctaaactaatcctaatgctaggattgtctggactcctgtggccttcgctaattaggcatgcatcttataagagactggatatagaaggtgctgattgaatttaagttagcacaggcgaagcatttaaaatagcattcttcttgtttgtcacaatcagcattaagctcataagtggattttttttggtacgagtatttgttttggtgctacaattgattattgaaattatatggtaatgaatggagctacaatgctaaatatgataagattttactgaaatgagtcttccaccctcctgttttgtgtgtaggaacatggttcaaagggtcatcgtggaattgggttcatcacttttcagagtgcaggtacgtttgcagaaatcctccatcatttattcaggcgttcattttaatttgttgttggggaagaataattttagcatagatgagtcttcatttatataaaatggcatcttgacctgaaacctttacttcatgtctgtgttctttagggatgattgcttttttccccagtttgatctttaagcttgatatgcattttgtaattaccttattcaatgcaactgtaatgttacagaatctgtggacagtatcatgcaagattcacatgaactggatggcacaacagtagttgttgaccgcgccactcctaaggtacctttgctccaaagcacttgccattggtggctgcatccaatagtatcttatctttgagtaggctctgtagtaggacattctatttactgaagtagttatgtacttgttaccacctgaaatccatctgaaccaggatgaagaagtcagatatcctccaagcaggggggcatctcagggtggctatggtgcatataatgcatacatttcagcagctaccagatatgcagctttgggtgcacctactctgtatgaccatccagggtcagcttatggaagtaagtcttctgctacgaagatcacaggtttgacacaaagcaactttgttaactggttaaatgttttctatttgacttacattgactaggaggaggatactatggatcctcccaaggaatgggcaacaaaaagatatttgttggcaggcttccacaagaggcaaacacggaggacctaaggcattactttggcaaatttggccgaattgtggatgcatatatcccaaaggtaaggttaagactttctcattgtttgtaactgtactatgttaatctcaaccttttctaattgtattgaaggaccctaaaagaagtggacatcgaggttttggttttgtcacctttgctgatgagggtgtggcagatcgggtagctcgcagaagtcatgaaattctaggacatgaggtaaggctgttggtgtctccttgtctctgcttcccatgcctccaaagccaaagtgacaatgtcaaccttagcttttctttggggaaaagaaaaacactaatcataccattccaatgtttcaggttgcaatagacactgctgcaccacttgagggtgactctggtggtggttacatggaacccatggatctttatggggcttatggttcaatgcgaacttatggcaggttctgcagtggtatcgactatgatgtaagtgcacaaatacattattatgcttatgatgcacagtaggcttatatataagttaattggtccgagtacatttgtgataacagagctgtaggcttaatgttggttcgttgtgattgtcaccaattatctgttgaatctcatgcaaatcatctaacaaaaacttgttgatgtcccagtacggttatggtcacagcggaagtagcagtagcagatcaagggctgattggcgataccgaccttactgagcctgctgtcttgttactgttaatgatgttttagtttacctccaagggaactgtggaaacggagaaaagaacaactccataaagaatgccaggttgtactatgttaatcttaagcgggacgggacatacgtggaatctgtatttcagttcatcctgtaaatttttctttgccattagaacgcattaatgcggtttctgtgccaggatgccatgagatcgaggcagcagtgtagttatcattattgtggaagtaccatatgtaataacaatctttcttctacacatgtaaacggtggttctggtttttgagcctctcgtgcctgatcctgctttcttgtctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0945800, RefSeq:Os01g0945800