Os01g0946700

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Revision as of 05:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0946700| Description = Similar to Glucan endo-1,3-beta-glucosidase GV (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GV) ((1->3)-beta-glucan...")
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Gene Name

Os01g0946700

Description

Similar to Glucan endo-1,3-beta-glucosidase GV (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GV) ((1->3)-beta-glucanase isoenzyme GV) (Beta-1,3- endoglucanase GV)

Version

NM_001051921.1 GI:115442212 GeneID:4325832

Length

1348 bp

Definition

Oryza sativa Japonica Group Os01g0946700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43398152..43399499

Sequence Coding Region

43398217..43398223,43398402..43399351

Expression

GEO Profiles:Os01g0946700

Genome Context

<gbrowseImage1> name=NC_008394:43398152..43399499 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43398152..43399499 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggtgcccacggtgtctgctatggcgttgtcggcaacaacctcccgtcgcggagcgaggtcgtgcagctgtacaagtcgaaaggcatcagcgcgatgcgcatctactacccggaccaggaagccctcgccgcgctccgcggcagcggcatcgccgtcatcgtcgacgtcggcgacaagggcgcggtggccaacctcgccaacaacccctccgccgccgccgactgggtccggaacaacgtccaggcctactggccgagcgtcttcatccggtacatcgccgtcggcaacgagctcggccccggcgacatggggaccatcctcccggccatgcagaacttgtacaacgcgctcgtgtccgccggcctctcgaacagcatcaaggtgtcgacggcggtgaagatggacgtgatcaccaactcgttccctccgtcgcacggcgtgttccgccccgaccttcagcggttcattgtgcccatcgcgcagttcctcgccaacaccatgtcgccgctgctcgtcaacgtgtacccctacttcgcctacagggacaacccgcgcgacatcccgctcaactacgccacgttccagccgggcaccacggtgagggacaacgacagcggcctcacctacaccaacctcttcagcgccatggtggacgccgtgtacgccgcgctggagaaggccggcgcgcccggcgtccgcgtcgtcgtgtcggagagcgggtggccgtcggcgggagggttcgcggcgaacgtggagaacgcgaggaatcacaaccagggcgtgatcgacaacgtcaagaacgggacgccgaagcggcccgggcagctggagacgtacgtgttcgccatgttcaacgagaaccagaagcccggggatgagaccgagaggcattttgggctcttcaatcctgacaagacgccggtctacccgattacgtttcctccgaactag</cdnaseq>

Protein Sequence

<aaseq>MGGAHGVCYGVVGNNLPSRSEVVQLYKSKGISAMRIYYPDQEAL AALRGSGIAVIVDVGDKGAVANLANNPSAAADWVRNNVQAYWPSVFIRYIAVGNELGP GDMGTILPAMQNLYNALVSAGLSNSIKVSTAVKMDVITNSFPPSHGVFRPDLQRFIVP IAQFLANTMSPLLVNVYPYFAYRDNPRDIPLNYATFQPGTTVRDNDSGLTYTNLFSAM VDAVYAALEKAGAPGVRVVVSESGWPSAGGFAANVENARNHNQGVIDNVKNGTPKRPG QLETYVFAMFNENQKPGDETERHFGLFNPDKTPVYPITFPPN</aaseq>

Gene Sequence

<dnaseqindica>66..72#251..1200#caagcgagcattgaagcatacatattcagatttgagcatctccgacaactgagtaatttgagcaaatgggaggtacattaattcagttttcatttttcttttgatcctcttatcttgcatgctgcgttaatctattgctaatcaactagtaattgtgttcgctaatcaacaagcaattaattcctctcaagcaattcaatctctctgtattttttcttcatcgattaattttagatttttaatcatgcaggtgcccacggtgtctgctatggcgttgtcggcaacaacctcccgtcgcggagcgaggtcgtgcagctgtacaagtcgaaaggcatcagcgcgatgcgcatctactacccggaccaggaagccctcgccgcgctccgcggcagcggcatcgccgtcatcgtcgacgtcggcgacaagggcgcggtggccaacctcgccaacaacccctccgccgccgccgactgggtccggaacaacgtccaggcctactggccgagcgtcttcatccggtacatcgccgtcggcaacgagctcggccccggcgacatggggaccatcctcccggccatgcagaacttgtacaacgcgctcgtgtccgccggcctctcgaacagcatcaaggtgtcgacggcggtgaagatggacgtgatcaccaactcgttccctccgtcgcacggcgtgttccgccccgaccttcagcggttcattgtgcccatcgcgcagttcctcgccaacaccatgtcgccgctgctcgtcaacgtgtacccctacttcgcctacagggacaacccgcgcgacatcccgctcaactacgccacgttccagccgggcaccacggtgagggacaacgacagcggcctcacctacaccaacctcttcagcgccatggtggacgccgtgtacgccgcgctggagaaggccggcgcgcccggcgtccgcgtcgtcgtgtcggagagcgggtggccgtcggcgggagggttcgcggcgaacgtggagaacgcgaggaatcacaaccagggcgtgatcgacaacgtcaagaacgggacgccgaagcggcccgggcagctggagacgtacgtgttcgccatgttcaacgagaaccagaagcccggggatgagaccgagaggcattttgggctcttcaatcctgacaagacgccggtctacccgattacgtttcctccgaactagcggctgaccatgtcaatgcgaataaggatttccatagacgaataatccatgcttaaataattaatgttggttgaatgttaatgtactctgtatggcacattgtgctttgaaaatgctacatgaataaaagttccaaatttatttcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0946700, RefSeq:Os01g0946700