Os01g0950900

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Revision as of 05:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0950900| Description = Protein of unknown function DUF221 domain containing protein| Version = NM_001051944.1 GI:115442258 GeneID:4325771| ...")
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Gene Name

Os01g0950900

Description

Protein of unknown function DUF221 domain containing protein

Version

NM_001051944.1 GI:115442258 GeneID:4325771

Length

3923 bp

Definition

Oryza sativa Japonica Group Os01g0950900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43664797..43668719

Sequence Coding Region

43664830..43665110,43665218..43665361,43665724..43665787,43666035..43666244,43666338..43666523
,43666668..43666966,43667072..43667351,43667433..43667705,43668011..43668229
,43668352..43668501

Expression

GEO Profiles:Os01g0950900

Genome Context

<gbrowseImage1> name=NC_008394:43664797..43668719 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43664797..43668719 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgcggaggggttgctggcgtcggcggcgatcaacctgggcctggcgctggtggcgctctcgctcttctccttgctcaagaagcagcccggcaacgcgccggtgtaccttgcgcggcggatggccgccggtggcggtgggggcgggctgccgctcggccacgggcggttgaccccgtcgttccggtggatccgcgccgcgctccggctctccgaggacgacgtgctgcggcgccacggcctcgacgcgctcgtcgtcgtccgcctcttcaaattcgggatcaagtgcttcgctgtttgctcaatcgttggattgttcatccttgcaccaacaaattattcctgtgaaggtctacaagacaccaaaaggtcaaattcaatggaacttttcacggtatccaatgtggcaaggggttctaacaggctttgggtgcattttgcatgcctctgcttcatatcattctatgtggtgtatttgcttcataaggagcacaaagaaatgtccagcagaagaattgcacatttgaagtatcacaggaaacggcctgaccaatataccattttagttcgaggaattccactatgcccagatcatggaacttatgggtgttatgctgaccacttcttctcaaagcactaccgaacataccaatcgtatcacatagtacacgacattggaaacatcaaggcacttcagaagttggcatcctcccttgaggacaagataaagaggaaaagagaaaccagaagatgtaacttttggaagtggatctggtttaagttgacattagaagcgatagatactcgcaaactggaagaaaaactgaagaacgtccatcactctatccgcctcctacagtgtgaaaatatgcttaaacggaaggaattaccggttgcttttgtctcattcaaatcacagctggatgctgcccaagctgccgaaatgcaacagcatgtcaatcctctgtccttggtgacaacatatgctcctgaaccacctgatgcactatggacaaatctggctattcctttctgccgtattgctatatacaaacttggtgtcttcattgctgcgtttctgctaatagtgttcttcaccatccctgtcacagctgtgcaagggatagtacaatttgagaaaattaaaatatggtttccaccggctagagctgtggaacttataccaggtttgaattctgtcgtaactgggtatcttccaagcatgatcttgaatggctttatctacttgattcccttcgcgatgcttggcatggcatcatttgagggatgcattgcaaaaagtcagaaggaaatcaaggcctgcaacatggtattttacttcttgttagggaatgttttctttttgagcattctttctggttctctactccaccagataggagaatcctttacacatccaaaagacatacctagccgtctggcccgtgctgtttctgcacagtcagatttcttcatcacatacattttgaccgacggcatgtcagggttttccttggaggttcttcagtttggtttgcttacatggcatttcttcaaggcacattcaattggacatagtgagcagccatatctttatggcttcccttactacagagttgtgcccatcgtttcccttgcagtattgattgggttggtctatgctgttgttgcgcctcttctacttccaattcttgttatctactttttgcttggttacgcagtgtacatcaaccagatggaagatgtatatgagattacatatgatacttgtggacaatattggcccaatattcatcgctacatcttcctttcggtcacactcatgcaaattacaatgctgaagtcgaaaccgggggcttcattcgccacggttcccttgcttgtgtcaaccattttgttcaatgagtactgcaaggttcggtttcttccaactttccttcatcgaccggttcaggttgccaaggagaatgacgaccttaatgaagctgaggggatgagaggtgacctggaccatgccattagcgcctataagccaccatggatgcgcccgacgaacttctctccagattgtagttcggtacaacctttgatccgttctgtatag</cdnaseq>

Protein Sequence

<aaseq>MDAEGLLASAAINLGLALVALSLFSLLKKQPGNAPVYLARRMAA GGGGGGLPLGHGRLTPSFRWIRAALRLSEDDVLRRHGLDALVVVRLFKFGIKCFAVCS IVGLFILAPTNYSCEGLQDTKRSNSMELFTVSNVARGSNRLWVHFACLCFISFYVVYL LHKEHKEMSSRRIAHLKYHRKRPDQYTILVRGIPLCPDHGTYGCYADHFFSKHYRTYQ SYHIVHDIGNIKALQKLASSLEDKIKRKRETRRCNFWKWIWFKLTLEAIDTRKLEEKL KNVHHSIRLLQCENMLKRKELPVAFVSFKSQLDAAQAAEMQQHVNPLSLVTTYAPEPP DALWTNLAIPFCRIAIYKLGVFIAAFLLIVFFTIPVTAVQGIVQFEKIKIWFPPARAV ELIPGLNSVVTGYLPSMILNGFIYLIPFAMLGMASFEGCIAKSQKEIKACNMVFYFLL GNVFFLSILSGSLLHQIGESFTHPKDIPSRLARAVSAQSDFFITYILTDGMSGFSLEV LQFGLLTWHFFKAHSIGHSEQPYLYGFPYYRVVPIVSLAVLIGLVYAVVAPLLLPILV IYFLLGYAVYINQMEDVYEITYDTCGQYWPNIHRYIFLSVTLMQITMLKSKPGASFAT VPLLVSTILFNEYCKVRFLPTFLHRPVQVAKENDDLNEAEGMRGDLDHAISAYKPPWM RPTNFSPDCSSVQPLIRSV</aaseq>

Gene Sequence

<dnaseqindica>34..314#422..565#928..991#1239..1448#1542..1727#1872..2170#2276..2555#2637..2909#3215..3433#3556..3705#ggggttgtcgaggcggcggaggttgcggcggggatggacgcggaggggttgctggcgtcggcggcgatcaacctgggcctggcgctggtggcgctctcgctcttctccttgctcaagaagcagcccggcaacgcgccggtgtaccttgcgcggcggatggccgccggtggcggtgggggcgggctgccgctcggccacgggcggttgaccccgtcgttccggtggatccgcgccgcgctccggctctccgaggacgacgtgctgcggcgccacggcctcgacgcgctcgtcgtcgtccgcctcttcaaattcgggtaagaatgtgttctactgatctgcatctactctgagaaaattgctaatgttactctgcttgctctctcaataggagtattttactaatttctttgtaagaatgtaggatcaagtgcttcgctgtttgctcaatcgttggattgttcatccttgcaccaacaaattattcctgtgaaggtctacaagacaccaaaaggtcaaattcaatggaacttttcacggtatccaatgtggcaaggggttctaacaggttagctattctgcagcttcctttcaccctcctctccaggtattcttcagagtcagagtagtcaggtcgaaaatgctagtgtttcagagatcagtggaggaaacccattcttgtgaatcaaacgttcatgaattgctctctggttataatttccaatttaaatgagtagttttctccaatagagcaagctgttttgctttcaatacaagttttcacaagggacactggcatatcttgtttaagctgatagactacagagtgttaatgatagtacataggagttgaaagttcatcagataagtattgcctagcaatcagcatggtgccaatctcttaactgagttagttctttgtcacaacaggctttgggtgcattttgcatgcctctgcttcatatcattctatgtggtgtatttgcttcataaggtacgtgtttataaaaatcttacaattgatccaattgttacaatcttacaattgatcctgttgtgttttctcccctgttcagttgtgaaaattgatgttgaaattttgatcacccaccatttgaaaatattttgctattttttatttactatcctattcctaagcaagtattcttgatttcgtttcaactattacataactatgctgttcaatacatatgtggcactggcatcttgaattgaaccaggagcacaaagaaatgtccagcagaagaattgcacatttgaagtatcacaggaaacggcctgaccaatataccattttagttcgaggaattccactatgcccagatcatggaacttatgggtgttatgctgaccacttcttctcaaagcactaccgaacataccaatcgtatcacatagtacacgacattggaaacatcaaggcacttcaggtgagtaattaatacattgaggtagaagttgtaatctgtgccatacttaagtgactattactacactattaatgtgcctttgcatcattacagaagttggcatcctcccttgaggacaagataaagaggaaaagagaaaccagaagatgtaacttttggaagtggatctggtttaagttgacattagaagcgatagatactcgcaaactggaagaaaaactgaagaacgtccatcactctatccgcctcctacagtgtgaaaatatgcttaaacggaaggtattgcattctcatgtattctccaatccacttgcttgtgccaatagtatcttcaatgttggtgttgcgaaacagagagaatgaaggcacctatttatattgagaattatttgtatcacatactaattttgctttcaactccaggaattaccggttgcttttgtctcattcaaatcacagctggatgctgcccaagctgccgaaatgcaacagcatgtcaatcctctgtccttggtgacaacatatgctcctgaaccacctgatgcactatggacaaatctggctattcctttctgccgtattgctatatacaaacttggtgtcttcattgctgcgtttctgctaatagtgttcttcaccatccctgtcacagctgtgcaagggatagtacaatttgagaaaattaaaatatggtttccaccggctagagctgtggaacttatgttagtggccaaaactttaatatattgtgatgcagtaggcaatgttagcatgtagtaccgtggtataacaacattgatttatatgatacttttgtcatcttgcagaccaggtttgaattctgtcgtaactgggtatcttccaagcatgatcttgaatggctttatctacttgattcccttcgcgatgcttggcatggcatcatttgagggatgcattgcaaaaagtcagaaggaaatcaaggcctgcaacatggtattttacttcttgttagggaatgttttctttttgagcattctttctggttctctactccaccagataggagaatcctttacacatccaaaagacatacctagccgtctggcccgtgctgtttctgcacaggtaaagcaaagaaaaaaaaaggttgtactgtatctatgttccacagcagccattcaatttatccatttgcttgctttgcagtcagatttcttcatcacatacattttgaccgacggcatgtcagggttttccttggaggttcttcagtttggtttgcttacatggcatttcttcaaggcacattcaattggacatagtgagcagccatatctttatggcttcccttactacagagttgtgcccatcgtttcccttgcagtattgattgggttggtctatgctgttgttgcgcctcttctacttccaattcttgttatctactttttgcttggttacgcagtgtacatcaaccaggtaaatttaattcataatacttgctgcttttcatatttgcgtttctctttagcgacttcaagttgatttaagctggcaatacttttttcttaataaattaaaaataagcttcatattaaagttattcaattttgcattacttgcaaagcagcattacatagattttaaaaaatacagaaattttctacacgtgacctccagcagattgcttggatggatatggttcagtctagccatttttatgccatccaaccttggtccttctattttatgtagtgattatttgtttgctatctttttaacagatggaagatgtatatgagattacatatgatacttgtggacaatattggcccaatattcatcgctacatcttcctttcggtcacactcatgcaaattacaatgctgaagtcgaaaccgggggcttcattcgccacggttcccttgcttgtgtcaaccattttgttcaatgagtactgcaaggttcggtttcttccaactttccttcatcgaccggttcaggtacattcatcgcattaattttataattcccttttatgtagttgtttccttgttagcggtgtcacattctttcgcgaagcacgtattaatctttgctatttctttttggattttcgtggaaggttgccaaggagaatgacgaccttaatgaagctgaggggatgagaggtgacctggaccatgccattagcgcctataagccaccatggatgcgcccgacgaacttctctccagattgtagttcggtacaacctttgatccgttctgtatagtagtgttggtgacaccgctagcttggtattggttttagtcctgttacataataagaaccaggcaaattttcgtgtgaagtttggctgttggcagatataagctcgcatataacaatggcatatgctttttatgtgctcaaggagtcgttttacatgtaattaccacgctttggctcagtttactcggtgaaaattacaaattcaaacaattttcctct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0950900, RefSeq:Os01g0950900