Os01g0951100

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Revision as of 05:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0951100| Description = Arf GTPase activating protein family protein| Version = NM_001051946.1 GI:115442262 GeneID:4325738| Length = 3705 bp...")
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Gene Name

Os01g0951100

Description

Arf GTPase activating protein family protein

Version

NM_001051946.1 GI:115442262 GeneID:4325738

Length

3705 bp

Definition

Oryza sativa Japonica Group Os01g0951100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43677407..43681111

Sequence Coding Region

43677576..43677637,43677810..43677880,43678297..43678390,43678773..43678848,43679618..43679781
,43679916..43680093,43680175..43680297,43680383..43680478,43680579..43680860

Expression

GEO Profiles:Os01g0951100

Genome Context

<gbrowseImage1> name=NC_008394:43677407..43681111 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43677407..43681111 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggggcacaaaccagtgcaccaattcgttgatagccccaagccgcagcgcagcgcgaggagaatttgtggaatggcatcgaggatcgatgcgaatgaccacggcaatcagcaaggaggcaatccccaaggtccagttggtacagcagagagattagagcatcttttaaaccaaccagcaaacaaaatttgtgctgactgtggtgctccagatcccaaatgggtgtcattgacttttggtgtgtttatttgcatcaagtgctctggagctcatagaagtcttggggtgcacatatccaaggtggtctcagtaaagctagacgagtggacagatgaacaagttgatattttagctgattcaggtggaaatgctgcagttaacatgatatacgaggcgtttatacctgaaaactacatgaagccaaggcaagattgctcatcagaggggcgcaatgactttgttaggagaaaatatgagcttcaacaatttttgtccaacacacagcttacttgctactcacaaaagagcggaaaaaatcataatcgcgtacaacatagcagttcaaataggcatggtttaggccatgctttcaggaacagttggaggagaaaagaacatgagagtaaatcagtgaagaaaacagtggagataggtatggttgaatttgttggattaattaaggtcaatgtcataagaggcacaaatctagctgttcgtgatatgatgtccagcgacccttatgttatccttaaccttggacaccagtcgatgaaaacaaaggtgattaagagcagcctgaatcctgtatggaatgaaaggattttgctatcaatacctgatcccatacctatgcttaaattgcaagtctatgacaaggacacattcactacagacgaccgaatgggggaggctgagattaacattcagccactggttgctgcagccaaggcatatgagacctcggtcgtcgctgatacggcacagctcaacagatggctagcaaaagaaggcatctggatccaaaaggacagtgctatctccatcatcgatggcaaggtgaagcaggaggtgaccgtcaggcttcagaacgtcgagcgtggccatcttgagatggagctcgagtgtgtcccgctcacgcaatag</cdnaseq>

Protein Sequence

<aaseq>MEGHKPVHQFVDSPKPQRSARRICGMASRIDANDHGNQQGGNPQ GPVGTAERLEHLLNQPANKICADCGAPDPKWVSLTFGVFICIKCSGAHRSLGVHISKV VSVKLDEWTDEQVDILADSGGNAAVNMIYEAFIPENYMKPRQDCSSEGRNDFVRRKYE LQQFLSNTQLTCYSQKSGKNHNRVQHSSSNRHGLGHAFRNSWRRKEHESKSVKKTVEI GMVEFVGLIKVNVIRGTNLAVRDMMSSDPYVILNLGHQSMKTKVIKSSLNPVWNERIL LSIPDPIPMLKLQVYDKDTFTTDDRMGEAEINIQPLVAAAKAYETSVVADTAQLNRWL AKEGIWIQKDSAISIIDGKVKQEVTVRLQNVERGHLEMELECVPLTQ</aaseq>

Gene Sequence

<dnaseqindica>170..231#404..474#891..984#1367..1442#2212..2375#2510..2687#2769..2891#2977..3072#3173..3454#acgaagacttgttcttcctcccgccgcgcatttctttaatcactcgatctgagctgcatcccaaatcccccccgatttaattatttgcggggggtgatggatccccacattgtcgtcgcgtcccctcccatcgcggggatgtgatgtctatgaggaggataataagatcatggaggggcacaaaccagtgcaccaattcgttgatagccccaagccgcagcgcagcgcgaggtaagcaccccctctccccccctcccattcttcatgccccaatgctgcgactgacgattgcgatttggtaatttttgttctttttgattgatttggctcggttcttgcatttcatacggattgagctaattcggtgtctgatgttatccccaccccctttgcatgtgtgcaggagaatttgtggaatggcatcgaggatcgatgcgaatgaccacggcaatcagcaaggaggcaatccccaaggtttctcccttttgatgtcccctttgaaatcttggcatgtggaattggatgctgcctacattccaattgaaattatagagttgctatagcttctttttttttccttttatataatcgtcaacatgaacatccgttagggaggaacaaataaatattaattgtaaagtgtgaagtctactttagcattcaacttcttcttggctgctgttattaatttcaagcagaatgaaatacttcctgccactccattaacacttagcaagtttctagacagatgaagctagttgtttcaaaaagaaagagggagaagaagaagctaaatgtccccttgtattgtatagaaatccagatgaagttgctacttatccatttgttgtttgtgataatgaccgatgttcatccatgattggtgccaggtccagttggtacagcagagagattagagcatcttttaaaccaaccagcaaacaaaatttgtgctgactgtggtgctccagatcccaaatgggtgtaagtatccatgaatcccgtaagtgctttttttaaggaaacaaaatctgcagtgtatagatgtagcctgtatgcagatcattttttaagattttgaaaagaaattgttctagctcatatatggtgtgtattccctgcttgacttaactgaattcgagctgaacattttaaaaatgtaaaggtcaatgcaatttacattgtagtaacaattgttgcatgtgtgtcgtgaaaaaaaaaattcttgcattacaattatctgaccacttatttagttgaagcaaaattaagtatatcttattcactgttgagataccatttcgttttgtcatggtatttcagccagagtgctatatactaatactagtacgtctggtgtgtgcaggtcattgacttttggtgtgtttatttgcatcaagtgctctggagctcatagaagtcttggggtgcacatatccaaggtagccatgatatctgtaccatagcaatttattatggctcttccacttttgagtttacttcttatttgatttcttttaagatgctctcctactccagccattgtaggttttcgctgaaacatattctgatcttccgggacaattaggttctagatgattttctagacgtgtccattgcgtgtttgctattactaagtgtatccccttctgtaactcaaatagtgcagtcctgtgacttatgtggccatccactgcgtatgatgaaaaacacttgaacctttcacttgctttgccagtcacctccgatctctacatggacatattttaggaaagaaatggtggagagaagaacttggtgacatatagggaacttatgtcctcatcctagtaattgttgccattttcatcctggagaattgtgcagaagcttgggaaatatctaacagtaaatgatgtgtttcaacaaccatttgtaggctacagagttttctgaggttcagcttcattggtctaattctagaaaagcacaaacacagctacacaacatatattagaaatccttttcaggtgtaagtgtcttcgacaaaacattgtagattagtggcttgttaaagaagaaacatacaaatgctaacagtcccaagcatttatttttcaatattttagctatcccacatagtatattttgatgtcaaactcttagctaagttagactaatggcctatggaatatcatttctgtaattggagtagaaatttgtctatttcaggtggtctcagtaaagctagacgagtggacagatgaacaagttgatattttagctgattcaggtggaaatgctgcagttaacatgatatacgaggcgtttatacctgaaaactacatgaagccaaggcaagattgctcatcagaggggcgcaatgactttgttaggtatgcaattaggttaccaatttctcattattttgatgtcttatacttgtagggtgacaccctgacatagcagatttcatttatagtaggactgtctcacaaatgatatttcccctctatctgcatctgtgcaggagaaaatatgagcttcaacaatttttgtccaacacacagcttacttgctactcacaaaagagcggaaaaaatcataatcgcgtacaacatagcagttcaaataggcatggtttaggccatgctttcaggaacagttggaggagaaaagaacatgagagtaaatcagtgaagaaaacagtacggctacattgtctcaaattcacagttccatttagaatctacctgcagtacttagagtttgacattttgctgtcctaggtggagataggtatggttgaatttgttggattaattaaggtcaatgtcataagaggcacaaatctagctgttcgtgatatgatgtccagcgacccttatgttatccttaaccttggacaccaggtaaacggcttcataccaatgttgcatcttaattatccaaaattcttagttccatgacattgacatcccttttacaccattttagtcgatgaaaacaaaggtgattaagagcagcctgaatcctgtatggaatgaaaggattttgctatcaatacctgatcccatacctatgcttaaattggtaagtatcttatctttcgagggatattgaaaataatcagtagctgtctttttttatttaattgttttggattagcgtttgattctgttctccttggcagcaagtctatgacaaggacacattcactacagacgaccgaatgggggaggctgagattaacattcagccactggttgctgcagccaaggcatatgagacctcggtcgtcgctgatacggcacagctcaacagatggctagcaaaagaaggcatctggatccaaaaggacagtgctatctccatcatcgatggcaaggtgaagcaggaggtgaccgtcaggcttcagaacgtcgagcgtggccatcttgagatggagctcgagtgtgtcccgctcacgcaatagctgcgcctgcagaaatgggttgctctgacattctgaattcagaacatggttacacgaacaaattctttgcaaacacttagggctttgtgtgtaattactgtggcaaattagaactcaaccatgcgttcaaggtttccatgcatcagatgtatctgtagaagttaggaaggagtacatgatgtgaggcgatttgtctattaaagttgagatcattctggcacaaatctgcttgatttgtaagcttgtctttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0951100, RefSeq:Os01g0951100